| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300577
Identifier: 146300577
GI number: 146300577
Start: 3362809
End: 3363183
Strand: Reverse
Name: 146300577
Synonym: Fjoh_2827
Alternate gene names: NA
Gene position: 3363183-3362809 (Counterclockwise)
Preceding gene: 146300578
Following gene: 146300575
Centisome position: 55.16
GC content: 37.07
Gene sequence:
>375_bases ATGAGCAAAAGAAATAAAATTATTTACTGGATTGCCACACTTTGGCTGGCTTTAGGCATGACTTCAACCGGAATCGTACA GCTATTAAAAATGAAAGAAGAAGCCGACATGATGGCTCATTTAGGTTATCCGCTATACTTTTTGACCATTTTGGGCATCT GGAAAATATTGGGCGTAATAGCAGTTTTAATCCCGAAATTTCCTTTATTAAAAGAATGGGCTTATGCCGGTTTTATTTTT GCCATGAGTGGTGCTGTATTTTCTCATTTTGCCGTTGGAGATTCAGGAATCGCCTATTTTGGTCCTTCCCTATTATTGGT TTTAACTGTTATTTCCTGGTATTTTAGACCTGCTGAGAGAAAAGTTGTAGATTAA
Upstream 100 bases:
>100_bases TGAGCATAGAGATTACCAGTTAAAACTGCCTTTTGCACAAGGTCTGAATATGGCACACAATCGTTTACAAGAAATCGTTA ATCAACTAAAATAAATCATC
Downstream 100 bases:
>100_bases GTTTTACAGTTGCAGTCACAGTTTTCAGTCGCAGTCACAGTTTTCAGTCCTAAAATTACTAAAAACTGAGACTGAATACT GAGACTGAATACTGAGACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSKRNKIIYWIATLWLALGMTSTGIVQLLKMKEEADMMAHLGYPLYFLTILGIWKILGVIAVLIPKFPLLKEWAYAGFIF AMSGAVFSHFAVGDSGIAYFGPSLLLVLTVISWYFRPAERKVVD
Sequences:
>Translated_124_residues MSKRNKIIYWIATLWLALGMTSTGIVQLLKMKEEADMMAHLGYPLYFLTILGIWKILGVIAVLIPKFPLLKEWAYAGFIF AMSGAVFSHFAVGDSGIAYFGPSLLLVLTVISWYFRPAERKVVD >Mature_123_residues SKRNKIIYWIATLWLALGMTSTGIVQLLKMKEEADMMAHLGYPLYFLTILGIWKILGVIAVLIPKFPLLKEWAYAGFIFA MSGAVFSHFAVGDSGIAYFGPSLLLVLTVISWYFRPAERKVVD
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13963; Mature: 13832
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRNKIIYWIATLWLALGMTSTGIVQLLKMKEEADMMAHLGYPLYFLTILGIWKILGVI CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AVLIPKFPLLKEWAYAGFIFAMSGAVFSHFAVGDSGIAYFGPSLLLVLTVISWYFRPAER HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHH KVVD CCCC >Mature Secondary Structure SKRNKIIYWIATLWLALGMTSTGIVQLLKMKEEADMMAHLGYPLYFLTILGIWKILGVI CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AVLIPKFPLLKEWAYAGFIFAMSGAVFSHFAVGDSGIAYFGPSLLLVLTVISWYFRPAER HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHH KVVD CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA