| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300520
Identifier: 146300520
GI number: 146300520
Start: 3304061
End: 3304429
Strand: Reverse
Name: 146300520
Synonym: Fjoh_2770
Alternate gene names: NA
Gene position: 3304429-3304061 (Counterclockwise)
Preceding gene: 146300521
Following gene: 146300519
Centisome position: 54.2
GC content: 31.17
Gene sequence:
>369_bases ATGCAAAAACTAACCAACAAAGAAGAAGAAATAATGCATATTTTATGGAAGCTCAAAAAAGCTTTTGTAAAAGAGATTCA GGCAGAAATTACCGAAGATCAGCCGCATTATAACACACTTTCGACAATTGTGCGTAATCTCGAAGAAAAAGGTTTTGTTT CGCATAATGCCTTTGGGAATACACATCAATATTATCCCATTGTAACCTTAGAGACATACAGTAAAAAATATATGAATACT GCAATTGATAATTATTTCAATAGTTCGTATAAAAATATGGTTTCATTTTTTGCTAAAGAAGAAAAAATTTCGGCAGATGA ATTGCGGGAAATTCTGGCTATGATCGAAAACCCTAAAGAAGAAAAATAA
Upstream 100 bases:
>100_bases TGGAACCAATGCAGTGGCTAAATATGGTGAAAAAGGTGCCAATGGCGTAATCGAAATTGAAACCCGAAAATAAAAGTCTT TAACTTTTAATAACCAAAAA
Downstream 100 bases:
>100_bases TCATTATGGAAGCACTTTTTATTTTTATAGTTAAATCGAGCAGTTTAATCGCATTATTTTACTTTGCTTATTTCTTTCTG CTTCGAAAAGAAACTTTCTT
Product: CopY family transcriptional regulator
Products: NA
Alternate protein names: Antibiotic Resistance-Related Regulatory Protein; Transcriptional Repressor CopY Family; Transcriptional Repressor Copy Family; BlaI-Like Antibiotic Resistance-Related Regulatory Protein; Penicillinase Repressor; CopY Family Transcriptional Regulator; BlaI/MecI/CopY Family Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator BlaI/MecI/CopY Family
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MQKLTNKEEEIMHILWKLKKAFVKEIQAEITEDQPHYNTLSTIVRNLEEKGFVSHNAFGNTHQYYPIVTLETYSKKYMNT AIDNYFNSSYKNMVSFFAKEEKISADELREILAMIENPKEEK
Sequences:
>Translated_122_residues MQKLTNKEEEIMHILWKLKKAFVKEIQAEITEDQPHYNTLSTIVRNLEEKGFVSHNAFGNTHQYYPIVTLETYSKKYMNT AIDNYFNSSYKNMVSFFAKEEKISADELREILAMIENPKEEK >Mature_122_residues MQKLTNKEEEIMHILWKLKKAFVKEIQAEITEDQPHYNTLSTIVRNLEEKGFVSHNAFGNTHQYYPIVTLETYSKKYMNT AIDNYFNSSYKNMVSFFAKEEKISADELREILAMIENPKEEK
Specific function: Unknown
COG id: COG3682
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14460; Mature: 14460
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKLTNKEEEIMHILWKLKKAFVKEIQAEITEDQPHYNTLSTIVRNLEEKGFVSHNAFGN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC THQYYPIVTLETYSKKYMNTAIDNYFNSSYKNMVSFFAKEEKISADELREILAMIENPKE CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC EK CC >Mature Secondary Structure MQKLTNKEEEIMHILWKLKKAFVKEIQAEITEDQPHYNTLSTIVRNLEEKGFVSHNAFGN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC THQYYPIVTLETYSKKYMNTAIDNYFNSSYKNMVSFFAKEEKISADELREILAMIENPKE CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC EK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA