Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146300521

Identifier: 146300521

GI number: 146300521

Start: 3304457

End: 3306004

Strand: Reverse

Name: 146300521

Synonym: Fjoh_2771

Alternate gene names: NA

Gene position: 3306004-3304457 (Counterclockwise)

Preceding gene: 146300522

Following gene: 146300520

Centisome position: 54.22

GC content: 30.68

Gene sequence:

>1548_bases
ATGTTTTATTGTGCTTACTACTTTTTACTTCGAAAAGAGACATTCTTTAACAGCAATAGATGGTTTTTACTTTTTGGTTT
AATTACCTCAGTAATATTGCCTCTTATTGTGTACACAAAAGTAGTCTGGGTAAATCCTGCTTCTCTATCTGATTTGACTT
TTTCACAAACCAATTTAATTGAAACCGCGTCAAATACACCCTTTACAATCAATTGGTTTTATTTGATTCTTTTTGCTTAC
GGCATTGGATTTATATCGCTTTTAATAAAGTTTGCTATTGATTTTTACAGTTTAAACTCGGTATTAAAAGGGAAAAAGAT
TTATCAGCAGGCTGATTTTAAATTTATTGATACAAACGAAAATATTGCACCTTTCTCCTATTTTGAATATATAGTGTACA
ACTCATCAATGTACACAGCATCAGAATTAGAAAATATTATTGAACACGAGAAAATACACAGCGATCAAAATCATACTGTA
GATGTTTTGATTTCCAGAGCTTTTTGCATGCTTTTTTGGTTCAATCCCATAATATGGCTTTATAGAAAAGCAATTATTCA
AAATTTGGAATTTATTGCAGATAAAGAAGCCGCTAAAAAATTAGAAGATAAAAAAGCGTATCAGTATACACTTTTAAAAA
TAACAACGCATGAAAATTGTGTTGCCATTACCAATCATTTTTTTCAATCATTAATCAAAAAACGAATAGTTATGTTAAAC
AAAAATCAATCTAAAAAGAGAAATTCATGGAAGTACTATGCGGTAATTCCTGCTCTTGCAGCTTTTGTTTTATTATTTCA
AATTGAAGTAATCGCAAAAGAAAAACAGCAGACTGTAAAGGAAGTATCTGGAGAAATTAAATCTGTGGATGTTTACAAAA
TCAAGAAAAACTCAACAGATGCAAATTTGAATGAAATTAAGGAGAAACTGAAAAAACTCCACAATGTAGATTTTGAAGTT
TCTGAAATAAAAAGAAATTCCAACAGCGATTTGACTTCTCTTAAAGTTAATATCAAAAACGGAAAACAGACAGCGCAGTC
AATTCAAACTGGAGAAAATAGCCCTATTAAAGATTTTGCAGTTATTGTAACGACCAATAAAGACGACAGCAAAAGCGTAG
GCATTCAGACTTATGACGAAATAAAAAATTCTAAAACTGACGGCGAACCTAAAGTCGCAATAAGCAAAAAACTTCAAACC
AAAACAGAAACCAATGGAAGCAATAATTCTAATGTTAGTGCAAAAACTAACACTAATACTAACACAAATACTAGCACTAC
TGTAATAGTAAATTCTGATAATGACACCAAAGTAATTACAACTACAAAGGGTTCAACAGCTTCTTTTTCAAACGGAACAA
AAGTAAGCATCAATGAAACTGACAAACTTATTGTTGTTGATGGAAAAGAAATGCCAAGCGGTTTTGACTATAATGATATT
AATTCAAAAGACATTAAATCTGTAAATGTTTACACTGGAACCAATGCAGTGGCTAAATATGGTGAAAAAGGTGCCAATGG
CGTAATCGAAATTGAAACCCGAAAATAA

Upstream 100 bases:

>100_bases
TACGCGAAATATTAGATATGATCGAAAATCCAACAGAAAAAAAATAATCATTATGGAAGCACTATTTATTTATATCGCAA
AATCGGCAGGTTTAATTACT

Downstream 100 bases:

>100_bases
AAGTCTTTAACTTTTAATAACCAAAAAATGCAAAAACTAACCAACAAAGAAGAAGAAATAATGCATATTTTATGGAAGCT
CAAAAAAGCTTTTGTAAAAG

Product: peptidase M56, BlaR1

Products: NA

Alternate protein names: NB Family Protein; BlaR1 Peptidase M; BlaR1 Peptidase; Nb Family Protein; Conserved Transporter; Peptidase M; Transcriptional Regulator; Antirepressor; NB Protein

Number of amino acids: Translated: 515; Mature: 515

Protein sequence:

>515_residues
MFYCAYYFLLRKETFFNSNRWFLLFGLITSVILPLIVYTKVVWVNPASLSDLTFSQTNLIETASNTPFTINWFYLILFAY
GIGFISLLIKFAIDFYSLNSVLKGKKIYQQADFKFIDTNENIAPFSYFEYIVYNSSMYTASELENIIEHEKIHSDQNHTV
DVLISRAFCMLFWFNPIIWLYRKAIIQNLEFIADKEAAKKLEDKKAYQYTLLKITTHENCVAITNHFFQSLIKKRIVMLN
KNQSKKRNSWKYYAVIPALAAFVLLFQIEVIAKEKQQTVKEVSGEIKSVDVYKIKKNSTDANLNEIKEKLKKLHNVDFEV
SEIKRNSNSDLTSLKVNIKNGKQTAQSIQTGENSPIKDFAVIVTTNKDDSKSVGIQTYDEIKNSKTDGEPKVAISKKLQT
KTETNGSNNSNVSAKTNTNTNTNTSTTVIVNSDNDTKVITTTKGSTASFSNGTKVSINETDKLIVVDGKEMPSGFDYNDI
NSKDIKSVNVYTGTNAVAKYGEKGANGVIEIETRK

Sequences:

>Translated_515_residues
MFYCAYYFLLRKETFFNSNRWFLLFGLITSVILPLIVYTKVVWVNPASLSDLTFSQTNLIETASNTPFTINWFYLILFAY
GIGFISLLIKFAIDFYSLNSVLKGKKIYQQADFKFIDTNENIAPFSYFEYIVYNSSMYTASELENIIEHEKIHSDQNHTV
DVLISRAFCMLFWFNPIIWLYRKAIIQNLEFIADKEAAKKLEDKKAYQYTLLKITTHENCVAITNHFFQSLIKKRIVMLN
KNQSKKRNSWKYYAVIPALAAFVLLFQIEVIAKEKQQTVKEVSGEIKSVDVYKIKKNSTDANLNEIKEKLKKLHNVDFEV
SEIKRNSNSDLTSLKVNIKNGKQTAQSIQTGENSPIKDFAVIVTTNKDDSKSVGIQTYDEIKNSKTDGEPKVAISKKLQT
KTETNGSNNSNVSAKTNTNTNTNTSTTVIVNSDNDTKVITTTKGSTASFSNGTKVSINETDKLIVVDGKEMPSGFDYNDI
NSKDIKSVNVYTGTNAVAKYGEKGANGVIEIETRK
>Mature_515_residues
MFYCAYYFLLRKETFFNSNRWFLLFGLITSVILPLIVYTKVVWVNPASLSDLTFSQTNLIETASNTPFTINWFYLILFAY
GIGFISLLIKFAIDFYSLNSVLKGKKIYQQADFKFIDTNENIAPFSYFEYIVYNSSMYTASELENIIEHEKIHSDQNHTV
DVLISRAFCMLFWFNPIIWLYRKAIIQNLEFIADKEAAKKLEDKKAYQYTLLKITTHENCVAITNHFFQSLIKKRIVMLN
KNQSKKRNSWKYYAVIPALAAFVLLFQIEVIAKEKQQTVKEVSGEIKSVDVYKIKKNSTDANLNEIKEKLKKLHNVDFEV
SEIKRNSNSDLTSLKVNIKNGKQTAQSIQTGENSPIKDFAVIVTTNKDDSKSVGIQTYDEIKNSKTDGEPKVAISKKLQT
KTETNGSNNSNVSAKTNTNTNTNTSTTVIVNSDNDTKVITTTKGSTASFSNGTKVSINETDKLIVVDGKEMPSGFDYNDI
NSKDIKSVNVYTGTNAVAKYGEKGANGVIEIETRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58471; Mature: 58471

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYCAYYFLLRKETFFNSNRWFLLFGLITSVILPLIVYTKVVWVNPASLSDLTFSQTNLI
CEEEEEEHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHEEEECCCCCCCCEECHHHHE
ETASNTPFTINWFYLILFAYGIGFISLLIKFAIDFYSLNSVLKGKKIYQQADFKFIDTNE
EECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
NIAPFSYFEYIVYNSSMYTASELENIIEHEKIHSDQNHTVDVLISRAFCMLFWFNPIIWL
CCCCHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YRKAIIQNLEFIADKEAAKKLEDKKAYQYTLLKITTHENCVAITNHFFQSLIKKRIVMLN
HHHHHHHHHHHHHCHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHEEEC
KNQSKKRNSWKYYAVIPALAAFVLLFQIEVIAKEKQQTVKEVSGEIKSVDVYKIKKNSTD
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCC
ANLNEIKEKLKKLHNVDFEVSEIKRNSNSDLTSLKVNIKNGKQTAQSIQTGENSPIKDFA
CCHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCCEEE
VIVTTNKDDSKSVGIQTYDEIKNSKTDGEPKVAISKKLQTKTETNGSNNSNVSAKTNTNT
EEEEECCCCCCCCCCEEHHHHHCCCCCCCCCEEEHHHHHCCCCCCCCCCCEEEEEECCCC
NTNTSTTVIVNSDNDTKVITTTKGSTASFSNGTKVSINETDKLIVVDGKEMPSGFDYNDI
CCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCC
NSKDIKSVNVYTGTNAVAKYGEKGANGVIEIETRK
CCCCCCEEEEEECCHHHHHCCCCCCCCEEEEEECC
>Mature Secondary Structure
MFYCAYYFLLRKETFFNSNRWFLLFGLITSVILPLIVYTKVVWVNPASLSDLTFSQTNLI
CEEEEEEHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHEEEECCCCCCCCEECHHHHE
ETASNTPFTINWFYLILFAYGIGFISLLIKFAIDFYSLNSVLKGKKIYQQADFKFIDTNE
EECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
NIAPFSYFEYIVYNSSMYTASELENIIEHEKIHSDQNHTVDVLISRAFCMLFWFNPIIWL
CCCCHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YRKAIIQNLEFIADKEAAKKLEDKKAYQYTLLKITTHENCVAITNHFFQSLIKKRIVMLN
HHHHHHHHHHHHHCHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHEEEC
KNQSKKRNSWKYYAVIPALAAFVLLFQIEVIAKEKQQTVKEVSGEIKSVDVYKIKKNSTD
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCC
ANLNEIKEKLKKLHNVDFEVSEIKRNSNSDLTSLKVNIKNGKQTAQSIQTGENSPIKDFA
CCHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCCEEE
VIVTTNKDDSKSVGIQTYDEIKNSKTDGEPKVAISKKLQTKTETNGSNNSNVSAKTNTNT
EEEEECCCCCCCCCCEEHHHHHCCCCCCCCCEEEHHHHHCCCCCCCCCCCEEEEEECCCC
NTNTSTTVIVNSDNDTKVITTTKGSTASFSNGTKVSINETDKLIVVDGKEMPSGFDYNDI
CCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCC
NSKDIKSVNVYTGTNAVAKYGEKGANGVIEIETRK
CCCCCCEEEEEECCHHHHHCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA