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The map label for this gene is 146300283

Identifier: 146300283

GI number: 146300283

Start: 3010826

End: 3011242

Strand: Direct

Name: 146300283

Synonym: Fjoh_2528

Alternate gene names: NA

Gene position: 3010826-3011242 (Clockwise)

Preceding gene: 146300282

Following gene: 146300284

Centisome position: 49.38

GC content: 35.49

Gene sequence:

>417_bases
ATGCCAAGAATACTCTCTATAGATTACGGACAAAAACGTACCGGAATAGCAGTTACAGATGAAATGCAGATAATAGCATC
TGGTTTAACTACGATTCCAACTCACACTTTAATCGATTTTCTTAAAGATTATTTTGCTAAAGAAAAAGTTGAAGCCGTTT
TAATTGGCGAGCCCAAACAAATGAATGGCCAGCCATCTGAAAGTGCATCTGTTATTAATGGGTTTGTAACTCACTTTTCA
AATATTTTTCCTGACATGAAAGTAATTCGTGTTGATGAACGTTTTACTTCAAAAATGGCATTTCAAACCATGCTCGACAG
CGGACTCAGCAAAAAACAACGCCAGAACAAAGGTTTAATCGACGAAATTTCGGCAACAATTATGCTTCAGGATTATCTTT
CTTCTAAACGTTTTTAA

Upstream 100 bases:

>100_bases
CTGCAATTATTAGAATTGAATCGGAATTAGAAATTGTTTATATTATTGGTTTTTTAAAACACAATAAATTATTTTAAGGT
AAACCTGCTAAAAAAATACA

Downstream 100 bases:

>100_bases
GTGTATTTCTGATTAATTTTTCTTTTTTAGAAAAAATTATAGTTTCCTAACTTTTATCATGCAAAAATTAGTTTTTTTTT
GCGATTGAAAGAAGTACCTT

Product: Holliday junction resolvase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MPRILSIDYGQKRTGIAVTDEMQIIASGLTTIPTHTLIDFLKDYFAKEKVEAVLIGEPKQMNGQPSESASVINGFVTHFS
NIFPDMKVIRVDERFTSKMAFQTMLDSGLSKKQRQNKGLIDEISATIMLQDYLSSKRF

Sequences:

>Translated_138_residues
MPRILSIDYGQKRTGIAVTDEMQIIASGLTTIPTHTLIDFLKDYFAKEKVEAVLIGEPKQMNGQPSESASVINGFVTHFS
NIFPDMKVIRVDERFTSKMAFQTMLDSGLSKKQRQNKGLIDEISATIMLQDYLSSKRF
>Mature_137_residues
PRILSIDYGQKRTGIAVTDEMQIIASGLTTIPTHTLIDFLKDYFAKEKVEAVLIGEPKQMNGQPSESASVINGFVTHFSN
IFPDMKVIRVDERFTSKMAFQTMLDSGLSKKQRQNKGLIDEISATIMLQDYLSSKRF

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUVX_FLAJ1 (A5FGX1)

Other databases:

- EMBL:   CP000685
- RefSeq:   YP_001194874.1
- ProteinModelPortal:   A5FGX1
- SMR:   A5FGX1
- STRING:   A5FGX1
- GeneID:   5091982
- GenomeReviews:   CP000685_GR
- KEGG:   fjo:Fjoh_2528
- eggNOG:   COG0816
- HOGENOM:   HBG607919
- OMA:   FAQPVGT
- ProtClustDB:   PRK00109
- BioCyc:   FJOH376686:FJOH_2528-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00651
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337
- Gene3D:   G3DSA:3.30.420.140
- SMART:   SM00732
- TIGRFAMs:   TIGR00250

Pfam domain/function: PF03652 UPF0081; SSF53098 RNaseH_fold

EC number: NA

Molecular weight: Translated: 15551; Mature: 15420

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRILSIDYGQKRTGIAVTDEMQIIASGLTTIPTHTLIDFLKDYFAKEKVEAVLIGEPKQ
CCCEECCCCCCCCCCEEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCC
MNGQPSESASVINGFVTHFSNIFPDMKVIRVDERFTSKMAFQTMLDSGLSKKQRQNKGLI
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCHHHHHHHCCCCH
DEISATIMLQDYLSSKRF
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PRILSIDYGQKRTGIAVTDEMQIIASGLTTIPTHTLIDFLKDYFAKEKVEAVLIGEPKQ
CCEECCCCCCCCCCEEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCC
MNGQPSESASVINGFVTHFSNIFPDMKVIRVDERFTSKMAFQTMLDSGLSKKQRQNKGLI
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCHHHHHHHCCCCH
DEISATIMLQDYLSSKRF
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA