| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300273
Identifier: 146300273
GI number: 146300273
Start: 3003122
End: 3003889
Strand: Direct
Name: 146300273
Synonym: Fjoh_2518
Alternate gene names: NA
Gene position: 3003122-3003889 (Clockwise)
Preceding gene: 146300271
Following gene: 146300276
Centisome position: 49.26
GC content: 28.52
Gene sequence:
>768_bases ATGAATTTTAAAGTAAATCCAATTTTCGAAAATAGCACTGAGTCGATACTTAATACAATCAAAATGTTCAGTTCTACGGG TGAACTTTTTGGAAATGGAGATCGTAATAAGATAAAATTATTTGATTTTAACGAAAAAAAAATCAATATAAAGTCATTTA AAATTCCGAATTTAATTAACAAGATTGCTTATCGATATTTTAGAAAGTCAAAAGCAAGACGATCATTTGAATATGCAACT ATTTTATTAGAAAAAGGAATTGGAACGCCCGAACCAATTGCATTTCTTGAAAATTTTAATATTCTGGGATTAAAAGACAG TTATTATGTAAGTGAGCATTTAAATGCTGATTTAACATATAGAGAACTGGTAGAAATTCCAAATTATCCAGATAATGAAA ATATATTAAGACAGTTTACCAGATTTAGTTTTGGACTACACGAAAAAGGAATTGAATTTTTAGACCATTCTCCAGGAAAT ACCCTAATTAAAAAGAATAGTGAAGGTACTTATGATTTTTTTCTTGTTGATTTAAACAGAATGGAATTTCATGAATCGAT GACTTTTGAAATGCGAATGAAAAACCTGTGCCGTTTGACTCCTCTTAAGGAAATGGTTGCAGTTATGAGTAATGAATATG CAAAATTGTATAAAAAAGAATCTGAGGAAAAGATTTTTGAAACTTTGTGGAAATATACAGCCGATTTTCAGGAGCAGTTT TATAGAAAGAAACGCCTAAAAAAGAAGCTTAAATTTTGGAAGAAGTAA
Upstream 100 bases:
>100_bases AATCTTAGGTGGCATTTTTTTTCTTTTTTTTACGAAAATACAATAATAATTTGAAGTCTTAGATCGTATACGTATTTTTG TTGTTTATAAAAAAAAGCTG
Downstream 100 bases:
>100_bases GACGGAAAAATTCTTTGTAACGAATATAAATGCTGTAAGCATTTAGGTAGCATATTATAATTCCATTTATGCCGTCTAAA AAACCAAGTCTTATTAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MNFKVNPIFENSTESILNTIKMFSSTGELFGNGDRNKIKLFDFNEKKINIKSFKIPNLINKIAYRYFRKSKARRSFEYAT ILLEKGIGTPEPIAFLENFNILGLKDSYYVSEHLNADLTYRELVEIPNYPDNENILRQFTRFSFGLHEKGIEFLDHSPGN TLIKKNSEGTYDFFLVDLNRMEFHESMTFEMRMKNLCRLTPLKEMVAVMSNEYAKLYKKESEEKIFETLWKYTADFQEQF YRKKRLKKKLKFWKK
Sequences:
>Translated_255_residues MNFKVNPIFENSTESILNTIKMFSSTGELFGNGDRNKIKLFDFNEKKINIKSFKIPNLINKIAYRYFRKSKARRSFEYAT ILLEKGIGTPEPIAFLENFNILGLKDSYYVSEHLNADLTYRELVEIPNYPDNENILRQFTRFSFGLHEKGIEFLDHSPGN TLIKKNSEGTYDFFLVDLNRMEFHESMTFEMRMKNLCRLTPLKEMVAVMSNEYAKLYKKESEEKIFETLWKYTADFQEQF YRKKRLKKKLKFWKK >Mature_255_residues MNFKVNPIFENSTESILNTIKMFSSTGELFGNGDRNKIKLFDFNEKKINIKSFKIPNLINKIAYRYFRKSKARRSFEYAT ILLEKGIGTPEPIAFLENFNILGLKDSYYVSEHLNADLTYRELVEIPNYPDNENILRQFTRFSFGLHEKGIEFLDHSPGN TLIKKNSEGTYDFFLVDLNRMEFHESMTFEMRMKNLCRLTPLKEMVAVMSNEYAKLYKKESEEKIFETLWKYTADFQEQF YRKKRLKKKLKFWKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30481; Mature: 30481
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFKVNPIFENSTESILNTIKMFSSTGELFGNGDRNKIKLFDFNEKKINIKSFKIPNLIN CCCCCCCCCCCCHHHHHHHHHHHHCCCHHCCCCCCCEEEEEECCCCEEEEEEECCHHHHH KIAYRYFRKSKARRSFEYATILLEKGIGTPEPIAFLENFNILGLKDSYYVSEHLNADLTY HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEECCCCHHHHHHCCCCCCH RELVEIPNYPDNENILRQFTRFSFGLHEKGIEFLDHSPGNTLIKKNSEGTYDFFLVDLNR HHHHHCCCCCCCHHHHHHHHHHHCCHHHHCHHHHCCCCCCCEEECCCCCCEEEEEEECCH MEFHESMTFEMRMKNLCRLTPLKEMVAVMSNEYAKLYKKESEEKIFETLWKYTADFQEQF HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRKKRLKKKLKFWKK HHHHHHHHHHHHHCC >Mature Secondary Structure MNFKVNPIFENSTESILNTIKMFSSTGELFGNGDRNKIKLFDFNEKKINIKSFKIPNLIN CCCCCCCCCCCCHHHHHHHHHHHHCCCHHCCCCCCCEEEEEECCCCEEEEEEECCHHHHH KIAYRYFRKSKARRSFEYATILLEKGIGTPEPIAFLENFNILGLKDSYYVSEHLNADLTY HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEECCCCHHHHHHCCCCCCH RELVEIPNYPDNENILRQFTRFSFGLHEKGIEFLDHSPGNTLIKKNSEGTYDFFLVDLNR HHHHHCCCCCCCHHHHHHHHHHHCCHHHHCHHHHCCCCCCCEEECCCCCCEEEEEEECCH MEFHESMTFEMRMKNLCRLTPLKEMVAVMSNEYAKLYKKESEEKIFETLWKYTADFQEQF HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRKKRLKKKLKFWKK HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA