| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300276
Identifier: 146300276
GI number: 146300276
Start: 3005851
End: 3006600
Strand: Direct
Name: 146300276
Synonym: Fjoh_2521
Alternate gene names: NA
Gene position: 3005851-3006600 (Clockwise)
Preceding gene: 146300273
Following gene: 146300277
Centisome position: 49.3
GC content: 32.13
Gene sequence:
>750_bases ATGAAAATTAGCGGCCTCGTCATTACGTTCAACGAAGAAAAGAACATTGGAAAATGTATTGATGCTTTATTGAAAGTATG CAATGAAGTTATTATTGTAGATTCTTTCAGTAAGGATCGTACAGTTGAAATTGCAAAAGAAAAGGGTGCAATAGTTATTG AACAGGCTTTTTTAGGAGATGGCCCACAACGAACACATGGTTTGCCTTATTGCAAAAATGATTGGATTTTAAATCTTGAT GCCGATGAGTTTTTGGATAAAGATGCTGAACAGTTTATCCTTAATGAAAAATATCTGCAAGGTAATTATGATGCTTTTAG TTTTAGAGTGAAAAACTTTTTAGCAGATAAACTGATTGATTTTTCAGGCTGGTATCCAGATCATAAAGTTCGTTTTTTCA ATAAGAAAACTGCCCATCCCTCTGATTCTAAAGTGCATCAGAAAATAATTACTCAAAATGAAAAAAAAGTTGCCGTGCAT ATTTTGCACTATGGCTGGGATTCTTTAGATCAGATTATTTCTAAAAAAAATCAATATTCTGGCTGGCATGCACAACAATT ATTTGATCAGGGGAGAAGAATTAATGCTTTAAAACCTGTAATTCATGGTACAGTATCTTTTATACGCTGTTACTTTTTCA AAAAAGGAGTCTTTAATGGCATCGATGGATTGTCAATCGCAATGATCCAAAGCTTTTTCTCTTATATGAAATATGCTAAA CTTTTAAAACTTCAAAAAAAGCTGAAATAA
Upstream 100 bases:
>100_bases AAATTACAAACTATTTTATGAAGTGTGCAACCATTCCAGACATTAAAAATGAATTAAAATAAAATGTGTTATTTTTGTAA AAATCAAATTAAAATTTAGA
Downstream 100 bases:
>100_bases AATTTCAGCTTTTTTTTAAAATAATAGTACTCTAAACCTGCTGAGTGATCTATTAAAACCATCTTATAAACAACAAAGTC TTTTGGTTGTATTAATTGTA
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MKISGLVITFNEEKNIGKCIDALLKVCNEVIIVDSFSKDRTVEIAKEKGAIVIEQAFLGDGPQRTHGLPYCKNDWILNLD ADEFLDKDAEQFILNEKYLQGNYDAFSFRVKNFLADKLIDFSGWYPDHKVRFFNKKTAHPSDSKVHQKIITQNEKKVAVH ILHYGWDSLDQIISKKNQYSGWHAQQLFDQGRRINALKPVIHGTVSFIRCYFFKKGVFNGIDGLSIAMIQSFFSYMKYAK LLKLQKKLK
Sequences:
>Translated_249_residues MKISGLVITFNEEKNIGKCIDALLKVCNEVIIVDSFSKDRTVEIAKEKGAIVIEQAFLGDGPQRTHGLPYCKNDWILNLD ADEFLDKDAEQFILNEKYLQGNYDAFSFRVKNFLADKLIDFSGWYPDHKVRFFNKKTAHPSDSKVHQKIITQNEKKVAVH ILHYGWDSLDQIISKKNQYSGWHAQQLFDQGRRINALKPVIHGTVSFIRCYFFKKGVFNGIDGLSIAMIQSFFSYMKYAK LLKLQKKLK >Mature_249_residues MKISGLVITFNEEKNIGKCIDALLKVCNEVIIVDSFSKDRTVEIAKEKGAIVIEQAFLGDGPQRTHGLPYCKNDWILNLD ADEFLDKDAEQFILNEKYLQGNYDAFSFRVKNFLADKLIDFSGWYPDHKVRFFNKKTAHPSDSKVHQKIITQNEKKVAVH ILHYGWDSLDQIISKKNQYSGWHAQQLFDQGRRINALKPVIHGTVSFIRCYFFKKGVFNGIDGLSIAMIQSFFSYMKYAK LLKLQKKLK
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 28764; Mature: 28764
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISGLVITFNEEKNIGKCIDALLKVCNEVIIVDSFSKDRTVEIAKEKGAIVIEQAFLGD CCCCCEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCEEEEHHHCCC GPQRTHGLPYCKNDWILNLDADEFLDKDAEQFILNEKYLQGNYDAFSFRVKNFLADKLID CCCCCCCCCCCCCCEEEECCHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH FSGWYPDHKVRFFNKKTAHPSDSKVHQKIITQNEKKVAVHILHYGWDSLDQIISKKNQYS CCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHCCCCCC GWHAQQLFDQGRRINALKPVIHGTVSFIRCYFFKKGVFNGIDGLSIAMIQSFFSYMKYAK CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LLKLQKKLK HHHHHHHCC >Mature Secondary Structure MKISGLVITFNEEKNIGKCIDALLKVCNEVIIVDSFSKDRTVEIAKEKGAIVIEQAFLGD CCCCCEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCEEEEHHHCCC GPQRTHGLPYCKNDWILNLDADEFLDKDAEQFILNEKYLQGNYDAFSFRVKNFLADKLID CCCCCCCCCCCCCCEEEECCHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH FSGWYPDHKVRFFNKKTAHPSDSKVHQKIITQNEKKVAVHILHYGWDSLDQIISKKNQYS CCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHCCCCCC GWHAQQLFDQGRRINALKPVIHGTVSFIRCYFFKKGVFNGIDGLSIAMIQSFFSYMKYAK CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LLKLQKKLK HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA