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The map label for this gene is rfbU [H]

Identifier: 146300268

GI number: 146300268

Start: 2998182

End: 2999315

Strand: Direct

Name: rfbU [H]

Synonym: Fjoh_2513

Alternate gene names: 146300268

Gene position: 2998182-2999315 (Clockwise)

Preceding gene: 146300266

Following gene: 146300269

Centisome position: 49.18

GC content: 28.84

Gene sequence:

>1134_bases
ATGATGAAAATAATCCTCGATTCGCAAGCTTTTAATTACCAGAAATATGGAGGGGTTTCAAGATATTATACAGAGATTTT
TTCTATTCTTTCTAAAAAAGACAACTTAGAAATTATTACGCCTTGGTTTTATACAAGAAATATATATTACAAGGAAAGTG
TGCTCTACAATAAGACACAGAAGCAAAACACTTTTTTTTTAGAGCTTTTATCTAAATTAGGAATTAGTATTAGGAAGAAA
AGTAAAAAACTAAACTATTCCAGAACTATTAATAGATTGAATTCAAAGGATACTTTTGATGTATTTGTACCAACATACTA
CGATCCTTATTTTTTGAATTTAATAAATGGAAAGCCTTTCGTTTTAACAGTTTACGATATGATTCATGAGCTCTTTCCCG
AATACTTTTCTGATGCAGATGAACTGAAAAAAAATAAATTATTATTAATCGAAAAGGCCGCAAAAATTATTGCTGTTTCT
CAAAATACAAAAAAAGACATTTTAACATTGTATCCTCATATAGATGAATCAAAAATAGAAGTCATCTATCATGGTACATC
AATTAAAGTGAATGAAAATACTGAGGCGGATTTACCAGAAAATTATATTCTATATGTTGGTTCCAGATCAGATTATAAAA
ACTTTAAATTTTTAGCAGATTCTATAAAAGTACTTTTAAAGAATAATCCGAATTTGTTTTTAGTTTGTGCAGGAGGAGGA
AAATTTGATAAGGAGGAAATCGAATTTATAAAAAGTTTAGATTTAGAAAAACAAATATTGCAGCTGGATTTTAAAGAACA
TGAATTGGGATATTTTTATAAAAAAGCAAAATGTTTTGTGTTTCCTTCCCTTTATGAAGGTTTTGGAATTCCTGTGTTAG
AATCGATGGCTTGCGAATGCCCGGTGGTTTTAGGAAATCATAGTTCTTTTCCTGAGGTGGCAGGAAATGCAGGAGTTTAT
TTTGATGTTAATAGTAAAGATGATTTAAGAAACAAGATTCAAAGTCTTCTTGAAAATGAAGCAATGAGAATAGAATTTTC
ATTAAAAGGTATCGAACAAATTAAAAGGTTTACTTGGGAAAACGCCGCACAGCAATGTCTAGATCTTTATAAAAAGTCAG
TTCAAATTAATTAG

Upstream 100 bases:

>100_bases
ATAAGTTTTTTTAACGCTTATTTTGCATTGTTATTTGTTATACTTTGCATTAGATAAATTAATAACTATTTTTTATTTTA
AACTTGAAATTTAATTTTTA

Downstream 100 bases:

>100_bases
AAAAGAATGAATAACTATAAAACAAAATCACCAGTACTATTTTTAATTTTTAATCGTCCAGATGTAACTGAGCAGGTTTT
TGAACAGATTAAAAAAATGC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MMKIILDSQAFNYQKYGGVSRYYTEIFSILSKKDNLEIITPWFYTRNIYYKESVLYNKTQKQNTFFLELLSKLGISIRKK
SKKLNYSRTINRLNSKDTFDVFVPTYYDPYFLNLINGKPFVLTVYDMIHELFPEYFSDADELKKNKLLLIEKAAKIIAVS
QNTKKDILTLYPHIDESKIEVIYHGTSIKVNENTEADLPENYILYVGSRSDYKNFKFLADSIKVLLKNNPNLFLVCAGGG
KFDKEEIEFIKSLDLEKQILQLDFKEHELGYFYKKAKCFVFPSLYEGFGIPVLESMACECPVVLGNHSSFPEVAGNAGVY
FDVNSKDDLRNKIQSLLENEAMRIEFSLKGIEQIKRFTWENAAQQCLDLYKKSVQIN

Sequences:

>Translated_377_residues
MMKIILDSQAFNYQKYGGVSRYYTEIFSILSKKDNLEIITPWFYTRNIYYKESVLYNKTQKQNTFFLELLSKLGISIRKK
SKKLNYSRTINRLNSKDTFDVFVPTYYDPYFLNLINGKPFVLTVYDMIHELFPEYFSDADELKKNKLLLIEKAAKIIAVS
QNTKKDILTLYPHIDESKIEVIYHGTSIKVNENTEADLPENYILYVGSRSDYKNFKFLADSIKVLLKNNPNLFLVCAGGG
KFDKEEIEFIKSLDLEKQILQLDFKEHELGYFYKKAKCFVFPSLYEGFGIPVLESMACECPVVLGNHSSFPEVAGNAGVY
FDVNSKDDLRNKIQSLLENEAMRIEFSLKGIEQIKRFTWENAAQQCLDLYKKSVQIN
>Mature_377_residues
MMKIILDSQAFNYQKYGGVSRYYTEIFSILSKKDNLEIITPWFYTRNIYYKESVLYNKTQKQNTFFLELLSKLGISIRKK
SKKLNYSRTINRLNSKDTFDVFVPTYYDPYFLNLINGKPFVLTVYDMIHELFPEYFSDADELKKNKLLLIEKAAKIIAVS
QNTKKDILTLYPHIDESKIEVIYHGTSIKVNENTEADLPENYILYVGSRSDYKNFKFLADSIKVLLKNNPNLFLVCAGGG
KFDKEEIEFIKSLDLEKQILQLDFKEHELGYFYKKAKCFVFPSLYEGFGIPVLESMACECPVVLGNHSSFPEVAGNAGVY
FDVNSKDDLRNKIQSLLENEAMRIEFSLKGIEQIKRFTWENAAQQCLDLYKKSVQIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 43880; Mature: 43880

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKIILDSQAFNYQKYGGVSRYYTEIFSILSKKDNLEIITPWFYTRNIYYKESVLYNKTQ
CEEEEEECCCCCHHHHCCHHHHHHHHHHHHCCCCCCEEEECEEEECEEEEEHHHHCCCCC
KQNTFFLELLSKLGISIRKKSKKLNYSRTINRLNSKDTFDVFVPTYYDPYFLNLINGKPF
CCCHHHHHHHHHCCCEEEHHHHHCCHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCE
VLTVYDMIHELFPEYFSDADELKKNKLLLIEKAAKIIAVSQNTKKDILTLYPHIDESKIE
EEEHHHHHHHHHHHHCCCHHHHCCCCEEEEEECCEEEEECCCCCCCEEEECCCCCCCEEE
VIYHGTSIKVNENTEADLPENYILYVGSRSDYKNFKFLADSIKVLLKNNPNLFLVCAGGG
EEEECCEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHEECCCCEEEEECCCC
KFDKEEIEFIKSLDLEKQILQLDFKEHELGYFYKKAKCFVFPSLYEGFGIPVLESMACEC
CCCHHHHHHHHHCCHHHHHHHCCCCCCCCHHEEEHEEEEECHHHHCCCCCCHHHHHCCCC
PVVLGNHSSFPEVAGNAGVYFDVNSKDDLRNKIQSLLENEAMRIEFSLKGIEQIKRFTWE
CEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH
NAAQQCLDLYKKSVQIN
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMKIILDSQAFNYQKYGGVSRYYTEIFSILSKKDNLEIITPWFYTRNIYYKESVLYNKTQ
CEEEEEECCCCCHHHHCCHHHHHHHHHHHHCCCCCCEEEECEEEECEEEEEHHHHCCCCC
KQNTFFLELLSKLGISIRKKSKKLNYSRTINRLNSKDTFDVFVPTYYDPYFLNLINGKPF
CCCHHHHHHHHHCCCEEEHHHHHCCHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCE
VLTVYDMIHELFPEYFSDADELKKNKLLLIEKAAKIIAVSQNTKKDILTLYPHIDESKIE
EEEHHHHHHHHHHHHCCCHHHHCCCCEEEEEECCEEEEECCCCCCCEEEECCCCCCCEEE
VIYHGTSIKVNENTEADLPENYILYVGSRSDYKNFKFLADSIKVLLKNNPNLFLVCAGGG
EEEECCEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHEECCCCEEEEECCCC
KFDKEEIEFIKSLDLEKQILQLDFKEHELGYFYKKAKCFVFPSLYEGFGIPVLESMACEC
CCCHHHHHHHHHCCHHHHHHHCCCCCCCCHHEEEHEEEEECHHHHCCCCCCHHHHHCCCC
PVVLGNHSSFPEVAGNAGVYFDVNSKDDLRNKIQSLLENEAMRIEFSLKGIEQIKRFTWE
CEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH
NAAQQCLDLYKKSVQIN
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]