| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300194
Identifier: 146300194
GI number: 146300194
Start: 2924517
End: 2925071
Strand: Direct
Name: 146300194
Synonym: Fjoh_2439
Alternate gene names: NA
Gene position: 2924517-2925071 (Clockwise)
Preceding gene: 146300192
Following gene: 146300195
Centisome position: 47.97
GC content: 26.49
Gene sequence:
>555_bases ATGGGTAATTTACAATGGGTAGATTCATCAGGAGGTCCTCTTGTTCTTATTTCTGATAAATCAGCAGAATTTTGGAGTGG AATATTAAAACGAAGCGCATATTTAGCAAAAATTAAAGAAGATGTAGAAGATTTTTTAGATCCAAATGAAACTGATTACG GAAAGGCTTGTATGATTAATAATTATTTAGGACTTGTTAAAGTTCAAAATGAAGATGTATTAGTAATTGCAGATGAACCT TTATCAACATCATTCTTTTTTGTGTCTGAAAAACCTGTTTTAGCAAGATGGATTTATGGAGAAGATAAAGCTTCGGTTAA TTATTTTTTATTGAATATTGAATTGGATTTGATTGAAAATTGGCATTTTGAATTTATAATTGATTTTTTTTCGGATAAAC AATTTTTGTTTGATTCAGTTAATTCGTTCGATAAGAAAATAAAACAATATTTGGAAATAAATATTAAAAAGGGATGTTAT AAAATATTTACGTCTTTGTTTGAACCTGATGACAAAACAAAACTAGTATTACATAAATTTGAAATCGAAAGTTAA
Upstream 100 bases:
>100_bases TATAACAAATTGTACGCGGGCTTCTTTATTCATTTCCGTAATTTTAAAGTCGTAAAAGTAATATAAATTTTACTTGAGCA GTTTAGTAATAATATAAAAT
Downstream 100 bases:
>100_bases TAAAACCTAAAATCAACAATCTAAAACCTAAAATAAAAATATGACAACATTAAAAGCCGGAGATAAAGCACCAAACTTTT CAGGAACAGATCAAGACGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MGNLQWVDSSGGPLVLISDKSAEFWSGILKRSAYLAKIKEDVEDFLDPNETDYGKACMINNYLGLVKVQNEDVLVIADEP LSTSFFFVSEKPVLARWIYGEDKASVNYFLLNIELDLIENWHFEFIIDFFSDKQFLFDSVNSFDKKIKQYLEINIKKGCY KIFTSLFEPDDKTKLVLHKFEIES
Sequences:
>Translated_184_residues MGNLQWVDSSGGPLVLISDKSAEFWSGILKRSAYLAKIKEDVEDFLDPNETDYGKACMINNYLGLVKVQNEDVLVIADEP LSTSFFFVSEKPVLARWIYGEDKASVNYFLLNIELDLIENWHFEFIIDFFSDKQFLFDSVNSFDKKIKQYLEINIKKGCY KIFTSLFEPDDKTKLVLHKFEIES >Mature_183_residues GNLQWVDSSGGPLVLISDKSAEFWSGILKRSAYLAKIKEDVEDFLDPNETDYGKACMINNYLGLVKVQNEDVLVIADEPL STSFFFVSEKPVLARWIYGEDKASVNYFLLNIELDLIENWHFEFIIDFFSDKQFLFDSVNSFDKKIKQYLEINIKKGCYK IFTSLFEPDDKTKLVLHKFEIES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21355; Mature: 21223
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNLQWVDSSGGPLVLISDKSAEFWSGILKRSAYLAKIKEDVEDFLDPNETDYGKACMIN CCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE NYLGLVKVQNEDVLVIADEPLSTSFFFVSEKPVLARWIYGEDKASVNYFLLNIELDLIEN CCEEEEEECCCCEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCEEEEEEEEEEEEECC WHFEFIIDFFSDKQFLFDSVNSFDKKIKQYLEINIKKGCYKIFTSLFEPDDKTKLVLHKF CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCEEEEEEE EIES ECCC >Mature Secondary Structure GNLQWVDSSGGPLVLISDKSAEFWSGILKRSAYLAKIKEDVEDFLDPNETDYGKACMIN CCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE NYLGLVKVQNEDVLVIADEPLSTSFFFVSEKPVLARWIYGEDKASVNYFLLNIELDLIEN CCEEEEEECCCCEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCEEEEEEEEEEEEECC WHFEFIIDFFSDKQFLFDSVNSFDKKIKQYLEINIKKGCYKIFTSLFEPDDKTKLVLHKF CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCEEEEEEE EIES ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA