| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300192
Identifier: 146300192
GI number: 146300192
Start: 2922713
End: 2923777
Strand: Direct
Name: 146300192
Synonym: Fjoh_2437
Alternate gene names: NA
Gene position: 2922713-2923777 (Clockwise)
Preceding gene: 146300191
Following gene: 146300194
Centisome position: 47.94
GC content: 31.08
Gene sequence:
>1065_bases ATGAAAAATAACCTTATTGTGTTATCAATATTTCTATTGGTAACAGTAGGAGCATTTGCTCAAAAAGACCAGATAAAAGA AGCCCAGTCTTTATATGATAAAGGAAAAAACGAAGAGGCATTAGCAGTTTTAAAAAAAACAGAATATTTGATCATAAATG CATCAGATTCAGATAAGTCGGATTTCTTTTATTTAAAAGGAAACATCTGCAAAGATTTAGCAGCAAAAAATATAGATGCA ATAAATAATTTTGCTCAGGCTTCCAGCGCTTATCAGGATGTTCTTCTGTATGAAAATGATTCCCGTAATTACAAATATGC TTTCAAAGCCAATTTAGCTTTAAAAGGTATGAAATCTACATTAGTAGACGGAGCATTTAGTGATTACAAAGCAGGAAAGT TTAAAGAAAGCGCAGCTAAAAGTTATGAAGTTTATCTCATAGATAAAAAAGATACTTTGAACCTTTTCAATGCGGCAGGA TCTTCATTAAACGGAAAAGATTATGTTTCTGCAATTAAGTATTATGAAGAGCTTAGAAAGATAAATTATACCGGTAAAGG GATGGTTTATTATGCTATGAATAAAAAAACAAAAACAGAAGAAGCTTTTATTTCAAGAAGTGCGCGAGAATCAAATATTC AGGCCGGACTTTATGAAAAACCCAGAGATTTTCTGCCTCCGTCTAAAAAAGAAGATATTCTTATATCATTAGGATATTGC TACTTAGAAAGAAATGATTATGTCAATGCAGCAAAATATTACGAAAGCGATCTTCAGTTAAATCCAAATTGCCTGGATTG CTGTATTAACCTTGCTTATGTAAAAATGCAGTTAAAAAAAGAAATACTGGATCAGATGAATCAATTGGGTAATAGTCCAA AAGAAATGAAAGAGTATGACAAACTAAGTGCACAAAAAGATGAAATTGTAAAAAGTGCCATTCCTTATCTTAAAAAAGCA TTGACAATTGAACCTAAAAATGAAGAAGCTACAAAAACACTTTTAGGCGTATATCGATCACTTGATATGACAAATGAATA CAATGCGTTAAAAAACGGGATGTAA
Upstream 100 bases:
>100_bases TTAGTTTTGTTTAGACCTTAATACTTATTAAGAGCAGGATTTTATAAAACGTAAAATCTTTTAAAACCCCAGTCTATTTA ATAACAAAACTTTACAAGAA
Downstream 100 bases:
>100_bases AAAAAACAGAAGCTGCTAGACTTTCTTTTTAGCAGCTTCTTCTAATATTGATTTTTTGCCGACAGTTCTGGTAATAATAT CTTTTTCAAGACTCCATCCA
Product: hypothetical protein
Products: NA
Alternate protein names: TPR Repeat Protein; TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MKNNLIVLSIFLLVTVGAFAQKDQIKEAQSLYDKGKNEEALAVLKKTEYLIINASDSDKSDFFYLKGNICKDLAAKNIDA INNFAQASSAYQDVLLYENDSRNYKYAFKANLALKGMKSTLVDGAFSDYKAGKFKESAAKSYEVYLIDKKDTLNLFNAAG SSLNGKDYVSAIKYYEELRKINYTGKGMVYYAMNKKTKTEEAFISRSARESNIQAGLYEKPRDFLPPSKKEDILISLGYC YLERNDYVNAAKYYESDLQLNPNCLDCCINLAYVKMQLKKEILDQMNQLGNSPKEMKEYDKLSAQKDEIVKSAIPYLKKA LTIEPKNEEATKTLLGVYRSLDMTNEYNALKNGM
Sequences:
>Translated_354_residues MKNNLIVLSIFLLVTVGAFAQKDQIKEAQSLYDKGKNEEALAVLKKTEYLIINASDSDKSDFFYLKGNICKDLAAKNIDA INNFAQASSAYQDVLLYENDSRNYKYAFKANLALKGMKSTLVDGAFSDYKAGKFKESAAKSYEVYLIDKKDTLNLFNAAG SSLNGKDYVSAIKYYEELRKINYTGKGMVYYAMNKKTKTEEAFISRSARESNIQAGLYEKPRDFLPPSKKEDILISLGYC YLERNDYVNAAKYYESDLQLNPNCLDCCINLAYVKMQLKKEILDQMNQLGNSPKEMKEYDKLSAQKDEIVKSAIPYLKKA LTIEPKNEEATKTLLGVYRSLDMTNEYNALKNGM >Mature_354_residues MKNNLIVLSIFLLVTVGAFAQKDQIKEAQSLYDKGKNEEALAVLKKTEYLIINASDSDKSDFFYLKGNICKDLAAKNIDA INNFAQASSAYQDVLLYENDSRNYKYAFKANLALKGMKSTLVDGAFSDYKAGKFKESAAKSYEVYLIDKKDTLNLFNAAG SSLNGKDYVSAIKYYEELRKINYTGKGMVYYAMNKKTKTEEAFISRSARESNIQAGLYEKPRDFLPPSKKEDILISLGYC YLERNDYVNAAKYYESDLQLNPNCLDCCINLAYVKMQLKKEILDQMNQLGNSPKEMKEYDKLSAQKDEIVKSAIPYLKKA LTIEPKNEEATKTLLGVYRSLDMTNEYNALKNGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40157; Mature: 40157
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNLIVLSIFLLVTVGAFAQKDQIKEAQSLYDKGKNEEALAVLKKTEYLIINASDSDKS CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCEEEEECCCCCCC DFFYLKGNICKDLAAKNIDAINNFAQASSAYQDVLLYENDSRNYKYAFKANLALKGMKST CEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECEEHHHHHHH LVDGAFSDYKAGKFKESAAKSYEVYLIDKKDTLNLFNAAGSSLNGKDYVSAIKYYEELRK HHHCCCCCCCCCCCHHHHCCCEEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH INYTGKGMVYYAMNKKTKTEEAFISRSARESNIQAGLYEKPRDFLPPSKKEDILISLGYC CCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCEEEEEEEE YLERNDYVNAAKYYESDLQLNPNCLDCCINLAYVKMQLKKEILDQMNQLGNSPKEMKEYD EEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH KLSAQKDEIVKSAIPYLKKALTIEPKNEEATKTLLGVYRSLDMTNEYNALKNGM HHCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCC >Mature Secondary Structure MKNNLIVLSIFLLVTVGAFAQKDQIKEAQSLYDKGKNEEALAVLKKTEYLIINASDSDKS CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCEEEEECCCCCCC DFFYLKGNICKDLAAKNIDAINNFAQASSAYQDVLLYENDSRNYKYAFKANLALKGMKST CEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECEEHHHHHHH LVDGAFSDYKAGKFKESAAKSYEVYLIDKKDTLNLFNAAGSSLNGKDYVSAIKYYEELRK HHHCCCCCCCCCCCHHHHCCCEEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH INYTGKGMVYYAMNKKTKTEEAFISRSARESNIQAGLYEKPRDFLPPSKKEDILISLGYC CCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCEEEEEEEE YLERNDYVNAAKYYESDLQLNPNCLDCCINLAYVKMQLKKEILDQMNQLGNSPKEMKEYD EEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH KLSAQKDEIVKSAIPYLKKALTIEPKNEEATKTLLGVYRSLDMTNEYNALKNGM HHCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA