Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300192

Identifier: 146300192

GI number: 146300192

Start: 2922713

End: 2923777

Strand: Direct

Name: 146300192

Synonym: Fjoh_2437

Alternate gene names: NA

Gene position: 2922713-2923777 (Clockwise)

Preceding gene: 146300191

Following gene: 146300194

Centisome position: 47.94

GC content: 31.08

Gene sequence:

>1065_bases
ATGAAAAATAACCTTATTGTGTTATCAATATTTCTATTGGTAACAGTAGGAGCATTTGCTCAAAAAGACCAGATAAAAGA
AGCCCAGTCTTTATATGATAAAGGAAAAAACGAAGAGGCATTAGCAGTTTTAAAAAAAACAGAATATTTGATCATAAATG
CATCAGATTCAGATAAGTCGGATTTCTTTTATTTAAAAGGAAACATCTGCAAAGATTTAGCAGCAAAAAATATAGATGCA
ATAAATAATTTTGCTCAGGCTTCCAGCGCTTATCAGGATGTTCTTCTGTATGAAAATGATTCCCGTAATTACAAATATGC
TTTCAAAGCCAATTTAGCTTTAAAAGGTATGAAATCTACATTAGTAGACGGAGCATTTAGTGATTACAAAGCAGGAAAGT
TTAAAGAAAGCGCAGCTAAAAGTTATGAAGTTTATCTCATAGATAAAAAAGATACTTTGAACCTTTTCAATGCGGCAGGA
TCTTCATTAAACGGAAAAGATTATGTTTCTGCAATTAAGTATTATGAAGAGCTTAGAAAGATAAATTATACCGGTAAAGG
GATGGTTTATTATGCTATGAATAAAAAAACAAAAACAGAAGAAGCTTTTATTTCAAGAAGTGCGCGAGAATCAAATATTC
AGGCCGGACTTTATGAAAAACCCAGAGATTTTCTGCCTCCGTCTAAAAAAGAAGATATTCTTATATCATTAGGATATTGC
TACTTAGAAAGAAATGATTATGTCAATGCAGCAAAATATTACGAAAGCGATCTTCAGTTAAATCCAAATTGCCTGGATTG
CTGTATTAACCTTGCTTATGTAAAAATGCAGTTAAAAAAAGAAATACTGGATCAGATGAATCAATTGGGTAATAGTCCAA
AAGAAATGAAAGAGTATGACAAACTAAGTGCACAAAAAGATGAAATTGTAAAAAGTGCCATTCCTTATCTTAAAAAAGCA
TTGACAATTGAACCTAAAAATGAAGAAGCTACAAAAACACTTTTAGGCGTATATCGATCACTTGATATGACAAATGAATA
CAATGCGTTAAAAAACGGGATGTAA

Upstream 100 bases:

>100_bases
TTAGTTTTGTTTAGACCTTAATACTTATTAAGAGCAGGATTTTATAAAACGTAAAATCTTTTAAAACCCCAGTCTATTTA
ATAACAAAACTTTACAAGAA

Downstream 100 bases:

>100_bases
AAAAAACAGAAGCTGCTAGACTTTCTTTTTAGCAGCTTCTTCTAATATTGATTTTTTGCCGACAGTTCTGGTAATAATAT
CTTTTTCAAGACTCCATCCA

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat Protein; TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MKNNLIVLSIFLLVTVGAFAQKDQIKEAQSLYDKGKNEEALAVLKKTEYLIINASDSDKSDFFYLKGNICKDLAAKNIDA
INNFAQASSAYQDVLLYENDSRNYKYAFKANLALKGMKSTLVDGAFSDYKAGKFKESAAKSYEVYLIDKKDTLNLFNAAG
SSLNGKDYVSAIKYYEELRKINYTGKGMVYYAMNKKTKTEEAFISRSARESNIQAGLYEKPRDFLPPSKKEDILISLGYC
YLERNDYVNAAKYYESDLQLNPNCLDCCINLAYVKMQLKKEILDQMNQLGNSPKEMKEYDKLSAQKDEIVKSAIPYLKKA
LTIEPKNEEATKTLLGVYRSLDMTNEYNALKNGM

Sequences:

>Translated_354_residues
MKNNLIVLSIFLLVTVGAFAQKDQIKEAQSLYDKGKNEEALAVLKKTEYLIINASDSDKSDFFYLKGNICKDLAAKNIDA
INNFAQASSAYQDVLLYENDSRNYKYAFKANLALKGMKSTLVDGAFSDYKAGKFKESAAKSYEVYLIDKKDTLNLFNAAG
SSLNGKDYVSAIKYYEELRKINYTGKGMVYYAMNKKTKTEEAFISRSARESNIQAGLYEKPRDFLPPSKKEDILISLGYC
YLERNDYVNAAKYYESDLQLNPNCLDCCINLAYVKMQLKKEILDQMNQLGNSPKEMKEYDKLSAQKDEIVKSAIPYLKKA
LTIEPKNEEATKTLLGVYRSLDMTNEYNALKNGM
>Mature_354_residues
MKNNLIVLSIFLLVTVGAFAQKDQIKEAQSLYDKGKNEEALAVLKKTEYLIINASDSDKSDFFYLKGNICKDLAAKNIDA
INNFAQASSAYQDVLLYENDSRNYKYAFKANLALKGMKSTLVDGAFSDYKAGKFKESAAKSYEVYLIDKKDTLNLFNAAG
SSLNGKDYVSAIKYYEELRKINYTGKGMVYYAMNKKTKTEEAFISRSARESNIQAGLYEKPRDFLPPSKKEDILISLGYC
YLERNDYVNAAKYYESDLQLNPNCLDCCINLAYVKMQLKKEILDQMNQLGNSPKEMKEYDKLSAQKDEIVKSAIPYLKKA
LTIEPKNEEATKTLLGVYRSLDMTNEYNALKNGM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40157; Mature: 40157

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNLIVLSIFLLVTVGAFAQKDQIKEAQSLYDKGKNEEALAVLKKTEYLIINASDSDKS
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCEEEEECCCCCCC
DFFYLKGNICKDLAAKNIDAINNFAQASSAYQDVLLYENDSRNYKYAFKANLALKGMKST
CEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECEEHHHHHHH
LVDGAFSDYKAGKFKESAAKSYEVYLIDKKDTLNLFNAAGSSLNGKDYVSAIKYYEELRK
HHHCCCCCCCCCCCHHHHCCCEEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
INYTGKGMVYYAMNKKTKTEEAFISRSARESNIQAGLYEKPRDFLPPSKKEDILISLGYC
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCEEEEEEEE
YLERNDYVNAAKYYESDLQLNPNCLDCCINLAYVKMQLKKEILDQMNQLGNSPKEMKEYD
EEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
KLSAQKDEIVKSAIPYLKKALTIEPKNEEATKTLLGVYRSLDMTNEYNALKNGM
HHCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCC
>Mature Secondary Structure
MKNNLIVLSIFLLVTVGAFAQKDQIKEAQSLYDKGKNEEALAVLKKTEYLIINASDSDKS
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCEEEEECCCCCCC
DFFYLKGNICKDLAAKNIDAINNFAQASSAYQDVLLYENDSRNYKYAFKANLALKGMKST
CEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECEEHHHHHHH
LVDGAFSDYKAGKFKESAAKSYEVYLIDKKDTLNLFNAAGSSLNGKDYVSAIKYYEELRK
HHHCCCCCCCCCCCHHHHCCCEEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
INYTGKGMVYYAMNKKTKTEEAFISRSARESNIQAGLYEKPRDFLPPSKKEDILISLGYC
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCEEEEEEEE
YLERNDYVNAAKYYESDLQLNPNCLDCCINLAYVKMQLKKEILDQMNQLGNSPKEMKEYD
EEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
KLSAQKDEIVKSAIPYLKKALTIEPKNEEATKTLLGVYRSLDMTNEYNALKNGM
HHCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA