| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300188
Identifier: 146300188
GI number: 146300188
Start: 2917046
End: 2918647
Strand: Direct
Name: 146300188
Synonym: Fjoh_2433
Alternate gene names: NA
Gene position: 2917046-2918647 (Clockwise)
Preceding gene: 146300187
Following gene: 146300189
Centisome position: 47.84
GC content: 36.2
Gene sequence:
>1602_bases ATGAAAAAAATACATTTTATTATAAATTTTTTCGTTTTGGCAGTACTCATAGGCTGTGCAAACGATGACTTAGATATTGA TTTAGACGGAATAGCTGCCCCGGCAAATATTTCGGTCTTAACAACAGTTACGCAGGATAATACCGGAAAAGTTACCTTCC TGCCAAAAGGTGAAGGTGCAACGCAGTTCAAAATTAGTTTTGGCGACGGAACACCAGACTCTGATTACATAGGAGTTGGA TCGACAGTTTCTCACGTTTACAAAGAAGGCGTTTATAAGTCAAAAATTATTGCATCAGGACTTAGCGGCAAAACAGCTGA AATAGAGAAAGAAGTTGTTGTTTCTTTTAGAGCTCCGGAAAATTTACAAGTTGTTGTAACAAATGATAAATTGGTTTCTA ATAAAATAACCGTTACAGCAACCGCTGATTTTGCCTTGTTTTATGATGTCTATTTTGGAGAAGCAGGACATCCTGATCCA GTTTCAGCTAATAATGGAGAACCAGTTTCGTACACTTATCAGGCTGCAGGAGTTTATACAATTAAAGTTGTTTCTAAAAG TGCAGCTATTAAAACAACTGAGCACACAGAAGAAGTTACAGCAAAATTAGTATTGAACCCAACTACATCTGCACCGGCAC AGCCAGGCAGACAAGCAGGAGATGTTATTTCAATTTTCAGCTCTAAATACACAGATATTGCAGGAACTAATTTTTATCCA AACTGGGGACAGTCAACAGGATTTGCTGAATTTGATTTAGATGGAGATAAAATGTTGAACTATACAAATCTAAACTATCA GGGAATTGCGCTGGCAGATAATGTTACGATTGATGTTTCAGGAATGGAATATCTTCACATGGATATCTGGACAGCAGATT TAGATAAACTGGCAATTTTCCCAATTAGTAAATCAAACGGAGAAAGAAAGGTTGTAAAAGATCTTACAGCAAACCAATGG ACTAGTATAGACATTCCTATTTCAGACTTTACAAGTCAGTCTGGTTTTACAGTTGCTGATATTTTCCAATTAAAATTAGA TGCTGTTACGGCAGGAAAAAGCGTTTATATTGATAATATTTATTTCTATAAAACAGCTGCTGAAACAATAGGACTGCCAA TTGACTTTGAATCTGCAGCTTTAACTTACGCTTGGGGCGGATTTGGAAATGTAGATGCTTCAGTAGTTACAAATCCTAAT AAAACTGGATTAAATGTTTCTAATAAAGTAGTGAAGATAGATAAGAAAAATGGAGCAGAAACCTGGGGAGGAGCAAGCTT AAATCTTGAAAATCCATTTGATGGTACAAAAGGAACTAAAGTAAAAGTAGCAGTATGGTCGCCAAAAGTTGGAGCCCCAA TATTATACAAAATGGAACTTTCTACATCACCAAAAGACGGTAATGGAAATCCAACGGTTAATTTTGAGGTACAGGTGCTT ACAACTGTTGCCAATGCCTGGGAAGTCCTGACATTTGATCTTACAAGCGCTGCTTCTTTTAACAGCAGTATAAAATACGA CAGAGTAATTCTATTCCCTGATTTTGGTAAAAACGGACTAGGAGAAACGTATTACTTTGATGATATAAAACAATCCAATT AA
Upstream 100 bases:
>100_bases TAAAGCGAATAAAAACGAATTATTTCCACTTCCTATTGAAGAAATTCAATTTGCTAACGGAAACTGGGCACAAAATCCTG GATACTAAAAAACATCAATT
Downstream 100 bases:
>100_bases AACAAGAAATCATGAGCAAGAAATTAATTATAAAGATAGTATCCCTATTTACGATTCTCTTGATGACGGGTTGTCAGAAA GACGATTTTACATTCGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MKKIHFIINFFVLAVLIGCANDDLDIDLDGIAAPANISVLTTVTQDNTGKVTFLPKGEGATQFKISFGDGTPDSDYIGVG STVSHVYKEGVYKSKIIASGLSGKTAEIEKEVVVSFRAPENLQVVVTNDKLVSNKITVTATADFALFYDVYFGEAGHPDP VSANNGEPVSYTYQAAGVYTIKVVSKSAAIKTTEHTEEVTAKLVLNPTTSAPAQPGRQAGDVISIFSSKYTDIAGTNFYP NWGQSTGFAEFDLDGDKMLNYTNLNYQGIALADNVTIDVSGMEYLHMDIWTADLDKLAIFPISKSNGERKVVKDLTANQW TSIDIPISDFTSQSGFTVADIFQLKLDAVTAGKSVYIDNIYFYKTAAETIGLPIDFESAALTYAWGGFGNVDASVVTNPN KTGLNVSNKVVKIDKKNGAETWGGASLNLENPFDGTKGTKVKVAVWSPKVGAPILYKMELSTSPKDGNGNPTVNFEVQVL TTVANAWEVLTFDLTSAASFNSSIKYDRVILFPDFGKNGLGETYYFDDIKQSN
Sequences:
>Translated_533_residues MKKIHFIINFFVLAVLIGCANDDLDIDLDGIAAPANISVLTTVTQDNTGKVTFLPKGEGATQFKISFGDGTPDSDYIGVG STVSHVYKEGVYKSKIIASGLSGKTAEIEKEVVVSFRAPENLQVVVTNDKLVSNKITVTATADFALFYDVYFGEAGHPDP VSANNGEPVSYTYQAAGVYTIKVVSKSAAIKTTEHTEEVTAKLVLNPTTSAPAQPGRQAGDVISIFSSKYTDIAGTNFYP NWGQSTGFAEFDLDGDKMLNYTNLNYQGIALADNVTIDVSGMEYLHMDIWTADLDKLAIFPISKSNGERKVVKDLTANQW TSIDIPISDFTSQSGFTVADIFQLKLDAVTAGKSVYIDNIYFYKTAAETIGLPIDFESAALTYAWGGFGNVDASVVTNPN KTGLNVSNKVVKIDKKNGAETWGGASLNLENPFDGTKGTKVKVAVWSPKVGAPILYKMELSTSPKDGNGNPTVNFEVQVL TTVANAWEVLTFDLTSAASFNSSIKYDRVILFPDFGKNGLGETYYFDDIKQSN >Mature_533_residues MKKIHFIINFFVLAVLIGCANDDLDIDLDGIAAPANISVLTTVTQDNTGKVTFLPKGEGATQFKISFGDGTPDSDYIGVG STVSHVYKEGVYKSKIIASGLSGKTAEIEKEVVVSFRAPENLQVVVTNDKLVSNKITVTATADFALFYDVYFGEAGHPDP VSANNGEPVSYTYQAAGVYTIKVVSKSAAIKTTEHTEEVTAKLVLNPTTSAPAQPGRQAGDVISIFSSKYTDIAGTNFYP NWGQSTGFAEFDLDGDKMLNYTNLNYQGIALADNVTIDVSGMEYLHMDIWTADLDKLAIFPISKSNGERKVVKDLTANQW TSIDIPISDFTSQSGFTVADIFQLKLDAVTAGKSVYIDNIYFYKTAAETIGLPIDFESAALTYAWGGFGNVDASVVTNPN KTGLNVSNKVVKIDKKNGAETWGGASLNLENPFDGTKGTKVKVAVWSPKVGAPILYKMELSTSPKDGNGNPTVNFEVQVL TTVANAWEVLTFDLTSAASFNSSIKYDRVILFPDFGKNGLGETYYFDDIKQSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57501; Mature: 57501
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIHFIINFFVLAVLIGCANDDLDIDLDGIAAPANISVLTTVTQDNTGKVTFLPKGEGA CCEEEHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEEEECCCCCEEEEEECCCCC TQFKISFGDGTPDSDYIGVGSTVSHVYKEGVYKSKIIASGLSGKTAEIEKEVVVSFRAPE EEEEEEECCCCCCCCEEECCHHHHHHHHCCCHHHHHEECCCCCCCHHCCEEEEEEEECCC NLQVVVTNDKLVSNKITVTATADFALFYDVYFGEAGHPDPVSANNGEPVSYTYQAAGVYT CCEEEEECCEEEECEEEEEEEECEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCEEE IKVVSKSAAIKTTEHTEEVTAKLVLNPTTSAPAQPGRQAGDVISIFSSKYTDIAGTNFYP EEEEECCCEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC NWGQSTGFAEFDLDGDKMLNYTNLNYQGIALADNVTIDVSGMEYLHMDIWTADLDKLAIF CCCCCCCEEEEECCCCCEEEEECCCEEEEEEECCEEEEECCCEEEEEEEEECCCCCEEEE PISKSNGERKVVKDLTANQWTSIDIPISDFTSQSGFTVADIFQLKLDAVTAGKSVYIDNI EECCCCCCHHHHHHCCCCCCEEEEEEHHHCCCCCCCEEEHEEEEEEEEEECCCEEEEEEE YFYKTAAETIGLPIDFESAALTYAWGGFGNVDASVVTNPNKTGLNVSNKVVKIDKKNGAE EEEEEHHHHCCCCEECCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCC TWGGASLNLENPFDGTKGTKVKVAVWSPKVGAPILYKMELSTSPKDGNGNPTVNFEVQVL CCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEE TTVANAWEVLTFDLTSAASFNSSIKYDRVILFPDFGKNGLGETYYFDDIKQSN EEECCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCC >Mature Secondary Structure MKKIHFIINFFVLAVLIGCANDDLDIDLDGIAAPANISVLTTVTQDNTGKVTFLPKGEGA CCEEEHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEEEECCCCCEEEEEECCCCC TQFKISFGDGTPDSDYIGVGSTVSHVYKEGVYKSKIIASGLSGKTAEIEKEVVVSFRAPE EEEEEEECCCCCCCCEEECCHHHHHHHHCCCHHHHHEECCCCCCCHHCCEEEEEEEECCC NLQVVVTNDKLVSNKITVTATADFALFYDVYFGEAGHPDPVSANNGEPVSYTYQAAGVYT CCEEEEECCEEEECEEEEEEEECEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCEEE IKVVSKSAAIKTTEHTEEVTAKLVLNPTTSAPAQPGRQAGDVISIFSSKYTDIAGTNFYP EEEEECCCEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC NWGQSTGFAEFDLDGDKMLNYTNLNYQGIALADNVTIDVSGMEYLHMDIWTADLDKLAIF CCCCCCCEEEEECCCCCEEEEECCCEEEEEEECCEEEEECCCEEEEEEEEECCCCCEEEE PISKSNGERKVVKDLTANQWTSIDIPISDFTSQSGFTVADIFQLKLDAVTAGKSVYIDNI EECCCCCCHHHHHHCCCCCCEEEEEEHHHCCCCCCCEEEHEEEEEEEEEECCCEEEEEEE YFYKTAAETIGLPIDFESAALTYAWGGFGNVDASVVTNPNKTGLNVSNKVVKIDKKNGAE EEEEEHHHHCCCCEECCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCC TWGGASLNLENPFDGTKGTKVKVAVWSPKVGAPILYKMELSTSPKDGNGNPTVNFEVQVL CCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEE TTVANAWEVLTFDLTSAASFNSSIKYDRVILFPDFGKNGLGETYYFDDIKQSN EEECCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA