| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300166
Identifier: 146300166
GI number: 146300166
Start: 2885386
End: 2885835
Strand: Direct
Name: 146300166
Synonym: Fjoh_2411
Alternate gene names: NA
Gene position: 2885386-2885835 (Clockwise)
Preceding gene: 146300163
Following gene: 146300167
Centisome position: 47.33
GC content: 34.44
Gene sequence:
>450_bases ATGTTTTCAAAAGCGTGTGAGTACGGAATCAGAGCTTCTATTTTTATTGCTACCAAATCTTCAAAAGGGATTCGGGTGGG AATAAAAGATGTTGCCAAAGAAATTGATTCGCCGGAACCATTTACTGCCAAGATTATGCAGATTTTAACCAAAAACGGCA TTATTCATTCAGCTAAAGGAGTAGGAGGCGGTTTTGAAGTTTCAAAGGAAGCATTAAAGTCAATAAAACTAATTCAGATT GTTGATGCAATCGACGGTGATAAAATTTACAGAGGATGCGGTATTGGTTTAAAAGAATGTTCAGAAGAACATCCATGTCC TGTGCATTTTGAATTTAAAAAAATAAGAGGTCTTCTTTTACAAATGCTTTCAACAACAACTTTAGAACAGCTTGCTTTGG GAGTAAAATCAGGAGACTTTTTTCTAAAAACAGTAAATACAAACGATTAA
Upstream 100 bases:
>100_bases CATTATAAATAAGGTTTTTCTTCAATAAAATTAATTAAAGATAAATTTGTCTTTTATTTTAAACTTTAATACATTTGTAA AGAATTAATCCAATCAGTGT
Downstream 100 bases:
>100_bases CATTAAATAAATTACTTAAAAATGAATACAAAAACCAAAATTTCACTATTGATCCTAATGGGATTTTTAACTATAACTTC TTGCGGTAAAAAAGAAACAG
Product: BadM/Rrf2 family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator BadM/Rrf2 Family; Transcriptional Regulator Badm/Rrf2 Family; Rrf2 Family Protein; Rrf2-Like Transcriptional Regulator Protein; Transcriptional Regulator; Rrf2 Family Transcriptional Regulator
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MFSKACEYGIRASIFIATKSSKGIRVGIKDVAKEIDSPEPFTAKIMQILTKNGIIHSAKGVGGGFEVSKEALKSIKLIQI VDAIDGDKIYRGCGIGLKECSEEHPCPVHFEFKKIRGLLLQMLSTTTLEQLALGVKSGDFFLKTVNTND
Sequences:
>Translated_149_residues MFSKACEYGIRASIFIATKSSKGIRVGIKDVAKEIDSPEPFTAKIMQILTKNGIIHSAKGVGGGFEVSKEALKSIKLIQI VDAIDGDKIYRGCGIGLKECSEEHPCPVHFEFKKIRGLLLQMLSTTTLEQLALGVKSGDFFLKTVNTND >Mature_149_residues MFSKACEYGIRASIFIATKSSKGIRVGIKDVAKEIDSPEPFTAKIMQILTKNGIIHSAKGVGGGFEVSKEALKSIKLIQI VDAIDGDKIYRGCGIGLKECSEEHPCPVHFEFKKIRGLLLQMLSTTTLEQLALGVKSGDFFLKTVNTND
Specific function: Unknown
COG id: COG1959
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16220; Mature: 16220
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSKACEYGIRASIFIATKSSKGIRVGIKDVAKEIDSPEPFTAKIMQILTKNGIIHSAKG CCCCHHCCCCEEEEEEEECCCCCEEECHHHHHHHCCCCCCHHHHHHHHHHHCCCEECCCC VGGGFEVSKEALKSIKLIQIVDAIDGDKIYRGCGIGLKECSEEHPCPVHFEFKKIRGLLL CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCHHHCCCCCCCCCEEHHHHHHHHHH QMLSTTTLEQLALGVKSGDFFLKTVNTND HHHHHHHHHHHHHCCCCCCEEEEEECCCC >Mature Secondary Structure MFSKACEYGIRASIFIATKSSKGIRVGIKDVAKEIDSPEPFTAKIMQILTKNGIIHSAKG CCCCHHCCCCEEEEEEEECCCCCEEECHHHHHHHCCCCCCHHHHHHHHHHHCCCEECCCC VGGGFEVSKEALKSIKLIQIVDAIDGDKIYRGCGIGLKECSEEHPCPVHFEFKKIRGLLL CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCHHHCCCCCCCCCEEHHHHHHHHHH QMLSTTTLEQLALGVKSGDFFLKTVNTND HHHHHHHHHHHHHCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA