Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300166

Identifier: 146300166

GI number: 146300166

Start: 2885386

End: 2885835

Strand: Direct

Name: 146300166

Synonym: Fjoh_2411

Alternate gene names: NA

Gene position: 2885386-2885835 (Clockwise)

Preceding gene: 146300163

Following gene: 146300167

Centisome position: 47.33

GC content: 34.44

Gene sequence:

>450_bases
ATGTTTTCAAAAGCGTGTGAGTACGGAATCAGAGCTTCTATTTTTATTGCTACCAAATCTTCAAAAGGGATTCGGGTGGG
AATAAAAGATGTTGCCAAAGAAATTGATTCGCCGGAACCATTTACTGCCAAGATTATGCAGATTTTAACCAAAAACGGCA
TTATTCATTCAGCTAAAGGAGTAGGAGGCGGTTTTGAAGTTTCAAAGGAAGCATTAAAGTCAATAAAACTAATTCAGATT
GTTGATGCAATCGACGGTGATAAAATTTACAGAGGATGCGGTATTGGTTTAAAAGAATGTTCAGAAGAACATCCATGTCC
TGTGCATTTTGAATTTAAAAAAATAAGAGGTCTTCTTTTACAAATGCTTTCAACAACAACTTTAGAACAGCTTGCTTTGG
GAGTAAAATCAGGAGACTTTTTTCTAAAAACAGTAAATACAAACGATTAA

Upstream 100 bases:

>100_bases
CATTATAAATAAGGTTTTTCTTCAATAAAATTAATTAAAGATAAATTTGTCTTTTATTTTAAACTTTAATACATTTGTAA
AGAATTAATCCAATCAGTGT

Downstream 100 bases:

>100_bases
CATTAAATAAATTACTTAAAAATGAATACAAAAACCAAAATTTCACTATTGATCCTAATGGGATTTTTAACTATAACTTC
TTGCGGTAAAAAAGAAACAG

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator BadM/Rrf2 Family; Transcriptional Regulator Badm/Rrf2 Family; Rrf2 Family Protein; Rrf2-Like Transcriptional Regulator Protein; Transcriptional Regulator; Rrf2 Family Transcriptional Regulator

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MFSKACEYGIRASIFIATKSSKGIRVGIKDVAKEIDSPEPFTAKIMQILTKNGIIHSAKGVGGGFEVSKEALKSIKLIQI
VDAIDGDKIYRGCGIGLKECSEEHPCPVHFEFKKIRGLLLQMLSTTTLEQLALGVKSGDFFLKTVNTND

Sequences:

>Translated_149_residues
MFSKACEYGIRASIFIATKSSKGIRVGIKDVAKEIDSPEPFTAKIMQILTKNGIIHSAKGVGGGFEVSKEALKSIKLIQI
VDAIDGDKIYRGCGIGLKECSEEHPCPVHFEFKKIRGLLLQMLSTTTLEQLALGVKSGDFFLKTVNTND
>Mature_149_residues
MFSKACEYGIRASIFIATKSSKGIRVGIKDVAKEIDSPEPFTAKIMQILTKNGIIHSAKGVGGGFEVSKEALKSIKLIQI
VDAIDGDKIYRGCGIGLKECSEEHPCPVHFEFKKIRGLLLQMLSTTTLEQLALGVKSGDFFLKTVNTND

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16220; Mature: 16220

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSKACEYGIRASIFIATKSSKGIRVGIKDVAKEIDSPEPFTAKIMQILTKNGIIHSAKG
CCCCHHCCCCEEEEEEEECCCCCEEECHHHHHHHCCCCCCHHHHHHHHHHHCCCEECCCC
VGGGFEVSKEALKSIKLIQIVDAIDGDKIYRGCGIGLKECSEEHPCPVHFEFKKIRGLLL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCHHHCCCCCCCCCEEHHHHHHHHHH
QMLSTTTLEQLALGVKSGDFFLKTVNTND
HHHHHHHHHHHHHCCCCCCEEEEEECCCC
>Mature Secondary Structure
MFSKACEYGIRASIFIATKSSKGIRVGIKDVAKEIDSPEPFTAKIMQILTKNGIIHSAKG
CCCCHHCCCCEEEEEEEECCCCCEEECHHHHHHHCCCCCCHHHHHHHHHHHCCCEECCCC
VGGGFEVSKEALKSIKLIQIVDAIDGDKIYRGCGIGLKECSEEHPCPVHFEFKKIRGLLL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCHHHCCCCCCCCCEEHHHHHHHHHH
QMLSTTTLEQLALGVKSGDFFLKTVNTND
HHHHHHHHHHHHHCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA