Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146300163

Identifier: 146300163

GI number: 146300163

Start: 2882370

End: 2882804

Strand: Direct

Name: 146300163

Synonym: Fjoh_2408

Alternate gene names: NA

Gene position: 2882370-2882804 (Clockwise)

Preceding gene: 146300162

Following gene: 146300166

Centisome position: 47.28

GC content: 30.34

Gene sequence:

>435_bases
ATGAAAAAAATTACCCAAATCGCATTTATTTTTGCAACAATGTTAGTATTGGTAAGCTGTAAAAATACCAAACAAAAAAT
TCAGGAGCACGTAAGTACTTATAATAATTCATCAACAATAAAAGGACACGGAATTACAAGTACAGCGGCTAAAGCATTTC
TAAATGACAATAAAATCGAGATTAGAATTGAAACTAATTTAGAAGAAAATGATTCTAATAAAGCAGCCTACAAAGAATCA
TTCCCTGATTTATTAAAAGAAATGATTCAAAACAATCAGATTTCGACAGAACTAATCGACGAAGGAGTAAAATTTGACGT
ATATTTCCTGGCTTATAATAATGCAATATTAGCCCAGCAATTAGTTGATAAAGAAGAATTAGCTGTTTTAGAAAGCGGAG
CTGCCACAGATAATAAAGAAACTGCAAAACTCTAA

Upstream 100 bases:

>100_bases
AGTTAAATAATTACATTTTTTAAAAATCTGATTTGATGTTGTTTTTTTATTTTAATTTCATTATGTTTGAGTTAAAAATT
AACTAATAAACCAAAAAATT

Downstream 100 bases:

>100_bases
GATTTAATATAAAAAATAAAAGCCTCTTTGAATTTCCAAAGAGGCTTTTATTTTTAGTTACGTTTGGTAACGTTCGTTAA
ATTATCAGGGAAATACAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKKITQIAFIFATMLVLVSCKNTKQKIQEHVSTYNNSSTIKGHGITSTAAKAFLNDNKIEIRIETNLEENDSNKAAYKES
FPDLLKEMIQNNQISTELIDEGVKFDVYFLAYNNAILAQQLVDKEELAVLESGAATDNKETAKL

Sequences:

>Translated_144_residues
MKKITQIAFIFATMLVLVSCKNTKQKIQEHVSTYNNSSTIKGHGITSTAAKAFLNDNKIEIRIETNLEENDSNKAAYKES
FPDLLKEMIQNNQISTELIDEGVKFDVYFLAYNNAILAQQLVDKEELAVLESGAATDNKETAKL
>Mature_144_residues
MKKITQIAFIFATMLVLVSCKNTKQKIQEHVSTYNNSSTIKGHGITSTAAKAFLNDNKIEIRIETNLEENDSNKAAYKES
FPDLLKEMIQNNQISTELIDEGVKFDVYFLAYNNAILAQQLVDKEELAVLESGAATDNKETAKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16120; Mature: 16120

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKITQIAFIFATMLVLVSCKNTKQKIQEHVSTYNNSSTIKGHGITSTAAKAFLNDNKIE
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHCCCEEE
IRIETNLEENDSNKAAYKESFPDLLKEMIQNNQISTELIDEGVKFDVYFLAYNNAILAQQ
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEEEECCHHHHHH
LVDKEELAVLESGAATDNKETAKL
HHCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKKITQIAFIFATMLVLVSCKNTKQKIQEHVSTYNNSSTIKGHGITSTAAKAFLNDNKIE
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHCCCEEE
IRIETNLEENDSNKAAYKESFPDLLKEMIQNNQISTELIDEGVKFDVYFLAYNNAILAQQ
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEEEECCHHHHHH
LVDKEELAVLESGAATDNKETAKL
HHCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA