| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300107
Identifier: 146300107
GI number: 146300107
Start: 2822931
End: 2824415
Strand: Direct
Name: 146300107
Synonym: Fjoh_2352
Alternate gene names: NA
Gene position: 2822931-2824415 (Clockwise)
Preceding gene: 146300106
Following gene: 146300108
Centisome position: 46.3
GC content: 35.29
Gene sequence:
>1485_bases ATGAAGTATTTATACAAAATAGCAAGTGTACTTTTTTTATTGTTTTTGGTTTCGTGCAGTGAAGAAAAAATAGGAGAGTC GGAGTTTGGAACCGTTACCGGAAAAGTAGTTTCGGCAGATACTTTTGAGCCGATGGAAAACGTAAAAATATTATCCAGCC CAACATCAAGTACCGTATTTACAGATGAAACCGGGAAATTTACAGTTTCAAATGTAAAAGTAGGCGAATATTCTTTTCAG GCTCAAAAAGACGGATATGTTGCAAAATTTGAAGCCGTAACCATTACAGCAAATAATACATCTGAAATTGTTTTTGAACT CAGTAAATCAACGGCAAATAATAAACCGCCAACAGTTCCGGTGTTAGTAAGTCCAATTGATAACAGTACAGCACAAGCTG TTTCGCTTGATTTAACCTGGACGGCTACAGATCCTAATAATGATGTGCTGACCTTTAAAGTAACGCTTAGAAATGACAGT AATAGTGATGTAAAAACTTTTGAAAATATAAAAGAGAAAAAAATAACCTTAACAGATCTTTTATTCGGAACAAAATATTA CTGGCAGGTTGAGGTTAATGACGGTATAAATACACCTGTTTTGAGTACTATCAGCGCTTTTACAACTTTACAATTTCCAA CAACACGTTATTTGTTTGTAAAAAAGATAAGCGATAACAATGTAATTTTTGCCGCAGATGATGCCGGAAAACAATATCAG TTAACCAGTTCCGATAAAAATTCCTGGCGTCCGAGGAGAAATAATCAGGCGCAAAAAATTGCTTTTATTGCCACAAACGG TTCGCAAAATGATATTTACACAATGAATTTTGACGGAACAGGAATAAAAAAAGTAACCAGTTCAGTGCCAATCGCAGGTT TCAATTCAGATTATATAGGTTATTCCTGGAATGCTTCGGGAAGTGAGTTTATTTATCCGAGTTTTGATAAACTGTACAGA ATTAACAGTGATGGAAGCGGTTTAACCAAAATATTCCAAACACCAAACGGCAAATTTATATCAGAATGCGACTGGAGTGC CGACGGAACTAAAATTGCCTTAAAAGTAAATGATGCCAATGGTTATAATGCAGAGGTGTATGTTATTGATACTTCGGGTA CGATAACAGCTTCAATACTTTCCGGACAACCAGGCGCAGTAGGCGGTTTAAATTTCTCTGTTACTGGATTAAAATTAATT TACACCAGAGATATAACCGGTTTTGAAAATTCGACTTACCGCCAGCTTGATACCAGAATTTTCGAATATAGTTTTGTAAC ATCATCGTCTTATCAAATTGTAACTGAGAAAATTTCGGGAACCAACGATTTGGATGTACGATATGCTCCAAACGAATCAG AATTAATTTTTACCAATACATCAAATGATGGTATTTCGGTAAAAAATATTCTAAAAACCAGTATAGGAGTTGCAAATTCC AGAGTTGTATTATTCTCCGGAACTTCAATGCCAGACTGGGAATAA
Upstream 100 bases:
>100_bases TTTGGTTTTGGACTTACTTATTATTTTGGTAAAAAGAAGAACAAGTAAGGAGATCAAATCTGAAATATAAAATGAAATTT AAATTTAAAAAAAAGGAATA
Downstream 100 bases:
>100_bases AGAGAAAATACCATAATAACCAACATAATTTAATCGGAGAAAATCGGCAGTATTCAAAATCTGCCGATTTTTTTATGAAT CATACAGACGAATCAATCGA
Product: fibronectin, type III domain-containing protein
Products: NA
Alternate protein names: Fibronectin Type III Domain-Containing Protein; Fibronectin Type III Domain Protein
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MKYLYKIASVLFLLFLVSCSEEKIGESEFGTVTGKVVSADTFEPMENVKILSSPTSSTVFTDETGKFTVSNVKVGEYSFQ AQKDGYVAKFEAVTITANNTSEIVFELSKSTANNKPPTVPVLVSPIDNSTAQAVSLDLTWTATDPNNDVLTFKVTLRNDS NSDVKTFENIKEKKITLTDLLFGTKYYWQVEVNDGINTPVLSTISAFTTLQFPTTRYLFVKKISDNNVIFAADDAGKQYQ LTSSDKNSWRPRRNNQAQKIAFIATNGSQNDIYTMNFDGTGIKKVTSSVPIAGFNSDYIGYSWNASGSEFIYPSFDKLYR INSDGSGLTKIFQTPNGKFISECDWSADGTKIALKVNDANGYNAEVYVIDTSGTITASILSGQPGAVGGLNFSVTGLKLI YTRDITGFENSTYRQLDTRIFEYSFVTSSSYQIVTEKISGTNDLDVRYAPNESELIFTNTSNDGISVKNILKTSIGVANS RVVLFSGTSMPDWE
Sequences:
>Translated_494_residues MKYLYKIASVLFLLFLVSCSEEKIGESEFGTVTGKVVSADTFEPMENVKILSSPTSSTVFTDETGKFTVSNVKVGEYSFQ AQKDGYVAKFEAVTITANNTSEIVFELSKSTANNKPPTVPVLVSPIDNSTAQAVSLDLTWTATDPNNDVLTFKVTLRNDS NSDVKTFENIKEKKITLTDLLFGTKYYWQVEVNDGINTPVLSTISAFTTLQFPTTRYLFVKKISDNNVIFAADDAGKQYQ LTSSDKNSWRPRRNNQAQKIAFIATNGSQNDIYTMNFDGTGIKKVTSSVPIAGFNSDYIGYSWNASGSEFIYPSFDKLYR INSDGSGLTKIFQTPNGKFISECDWSADGTKIALKVNDANGYNAEVYVIDTSGTITASILSGQPGAVGGLNFSVTGLKLI YTRDITGFENSTYRQLDTRIFEYSFVTSSSYQIVTEKISGTNDLDVRYAPNESELIFTNTSNDGISVKNILKTSIGVANS RVVLFSGTSMPDWE >Mature_494_residues MKYLYKIASVLFLLFLVSCSEEKIGESEFGTVTGKVVSADTFEPMENVKILSSPTSSTVFTDETGKFTVSNVKVGEYSFQ AQKDGYVAKFEAVTITANNTSEIVFELSKSTANNKPPTVPVLVSPIDNSTAQAVSLDLTWTATDPNNDVLTFKVTLRNDS NSDVKTFENIKEKKITLTDLLFGTKYYWQVEVNDGINTPVLSTISAFTTLQFPTTRYLFVKKISDNNVIFAADDAGKQYQ LTSSDKNSWRPRRNNQAQKIAFIATNGSQNDIYTMNFDGTGIKKVTSSVPIAGFNSDYIGYSWNASGSEFIYPSFDKLYR INSDGSGLTKIFQTPNGKFISECDWSADGTKIALKVNDANGYNAEVYVIDTSGTITASILSGQPGAVGGLNFSVTGLKLI YTRDITGFENSTYRQLDTRIFEYSFVTSSSYQIVTEKISGTNDLDVRYAPNESELIFTNTSNDGISVKNILKTSIGVANS RVVLFSGTSMPDWE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54320; Mature: 54320
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLYKIASVLFLLFLVSCSEEKIGESEFGTVTGKVVSADTFEPMENVKILSSPTSSTVF CHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCEEE TDETGKFTVSNVKVGEYSFQAQKDGYVAKFEAVTITANNTSEIVFELSKSTANNKPPTVP ECCCCCEEEEEEEECCEEEEECCCCEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCEEE VLVSPIDNSTAQAVSLDLTWTATDPNNDVLTFKVTLRNDSNSDVKTFENIKEKKITLTDL EEEECCCCCCCEEEEEEEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHCEEEEEHE LFGTKYYWQVEVNDGINTPVLSTISAFTTLQFPTTRYLFVKKISDNNVIFAADDAGKQYQ EECCEEEEEEEECCCCCCCHHHHHHHHEEEECCCEEEEEEEEECCCCEEEEECCCCCEEE LTSSDKNSWRPRRNNQAQKIAFIATNGSQNDIYTMNFDGTGIKKVTSSVPIAGFNSDYIG EECCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCHHHHHCCCCEECCCCCCCE YSWNASGSEFIYPSFDKLYRINSDGSGLTKIFQTPNGKFISECDWSADGTKIALKVNDAN EEECCCCCEEECCCHHHEEEECCCCCCEEEEEECCCCCEEEECCCCCCCCEEEEEEECCC GYNAEVYVIDTSGTITASILSGQPGAVGGLNFSVTGLKLIYTRDITGFENSTYRQLDTRI CCEEEEEEEECCCEEEEEEECCCCCCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHEE FEYSFVTSSSYQIVTEKISGTNDLDVRYAPNESELIFTNTSNDGISVKNILKTSIGVANS EEEEEEECCCEEEEEEECCCCCCEEEEECCCCCCEEEEECCCCCEEHHHHHHHHCCCCCC RVVLFSGTSMPDWE EEEEEECCCCCCCC >Mature Secondary Structure MKYLYKIASVLFLLFLVSCSEEKIGESEFGTVTGKVVSADTFEPMENVKILSSPTSSTVF CHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCEEE TDETGKFTVSNVKVGEYSFQAQKDGYVAKFEAVTITANNTSEIVFELSKSTANNKPPTVP ECCCCCEEEEEEEECCEEEEECCCCEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCEEE VLVSPIDNSTAQAVSLDLTWTATDPNNDVLTFKVTLRNDSNSDVKTFENIKEKKITLTDL EEEECCCCCCCEEEEEEEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHCEEEEEHE LFGTKYYWQVEVNDGINTPVLSTISAFTTLQFPTTRYLFVKKISDNNVIFAADDAGKQYQ EECCEEEEEEEECCCCCCCHHHHHHHHEEEECCCEEEEEEEEECCCCEEEEECCCCCEEE LTSSDKNSWRPRRNNQAQKIAFIATNGSQNDIYTMNFDGTGIKKVTSSVPIAGFNSDYIG EECCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCHHHHHCCCCEECCCCCCCE YSWNASGSEFIYPSFDKLYRINSDGSGLTKIFQTPNGKFISECDWSADGTKIALKVNDAN EEECCCCCEEECCCHHHEEEECCCCCCEEEEEECCCCCEEEECCCCCCCCEEEEEEECCC GYNAEVYVIDTSGTITASILSGQPGAVGGLNFSVTGLKLIYTRDITGFENSTYRQLDTRI CCEEEEEEEECCCEEEEEEECCCCCCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHEE FEYSFVTSSSYQIVTEKISGTNDLDVRYAPNESELIFTNTSNDGISVKNILKTSIGVANS EEEEEEECCCEEEEEEECCCCCCEEEEECCCCCCEEEEECCCCCEEHHHHHHHHCCCCCC RVVLFSGTSMPDWE EEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA