| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300053
Identifier: 146300053
GI number: 146300053
Start: 2771590
End: 2772381
Strand: Direct
Name: 146300053
Synonym: Fjoh_2298
Alternate gene names: NA
Gene position: 2771590-2772381 (Clockwise)
Preceding gene: 146300052
Following gene: 146300057
Centisome position: 45.46
GC content: 36.11
Gene sequence:
>792_bases ATGAGTATGAAACAAGCCAAAAATATAAACGAAGTAATTCTGTTATTAGATCAAATAATAGAAAAATCAAAAATAGACCA AAGCAATTTAGGTTTATTTGCTATTCTGTACCGTGAAGTTACCGTAAGAGTAAAAGAAGGCATACAGAATGGTTCTTTTC AAAATGGCGAGCGAATGGAAAAACTCGACGTTATTTTTGCCAACAGATATCTAAAAGCCTATTATGAATATCAGGCCAAA GAAAAACCATCAGAATGCTGGGGATTTGCCTTTGAACAAGCCGATAAATTTTGGCCTATAGTATTGCAGCATTTACTTTT GGGAATGAATGCTCATATTAACCTTGACTTGGGAATTGCCTCGGCAGAAATTTGCACAGTTGAAGATATAAAGGATTTAC AAGCCGACTTTGATAAAATAAATGCCATTTTGAGCAATTTGGTTGGCGGTGTCGAAAAATGCCTAATCAAAATTTGGCCG ACACTTACGTGGATATTAAAATTTACTGGAAAAATAGATACTTTTTTTATTGATTTCAGCATGGAAACGGCAAGAAACGG AGCTTGGAAATTTGCCAACGAATTTGTAGCTGTTCCCGAAAATGAAAGAGAAGCCTGCATACAGTTGAGAGACCAAAGAA TTACAGAAATCGCCCGACTGGTTTCGAACCCCGGATATTTTGTGAGCGCTGTTTTTAAATTCATCCGTTTATTTGAAAGA GGAACGATCGCTCAAAAAATAATTGATATGCAGATTGCCGAACAAAATAATGTGGAATGTGTTGCTGCGTGA
Upstream 100 bases:
>100_bases ACCAAAAGAAATAATAAGATAATTACTTCAAAAAAACGTTCATCGAAAGCTTAAAATAATTAAATTCGTTTTACCAAAAA CAAACCATAACCAATTATAA
Downstream 100 bases:
>100_bases TTTTGTCTTAAATTATTGATTTAAGATTTCGTTTTCATCACTTTTATTAATTTCTCATTACGCTTATCTGCTCTTGAATT CTGCAAAGAAATAACAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MSMKQAKNINEVILLLDQIIEKSKIDQSNLGLFAILYREVTVRVKEGIQNGSFQNGERMEKLDVIFANRYLKAYYEYQAK EKPSECWGFAFEQADKFWPIVLQHLLLGMNAHINLDLGIASAEICTVEDIKDLQADFDKINAILSNLVGGVEKCLIKIWP TLTWILKFTGKIDTFFIDFSMETARNGAWKFANEFVAVPENEREACIQLRDQRITEIARLVSNPGYFVSAVFKFIRLFER GTIAQKIIDMQIAEQNNVECVAA
Sequences:
>Translated_263_residues MSMKQAKNINEVILLLDQIIEKSKIDQSNLGLFAILYREVTVRVKEGIQNGSFQNGERMEKLDVIFANRYLKAYYEYQAK EKPSECWGFAFEQADKFWPIVLQHLLLGMNAHINLDLGIASAEICTVEDIKDLQADFDKINAILSNLVGGVEKCLIKIWP TLTWILKFTGKIDTFFIDFSMETARNGAWKFANEFVAVPENEREACIQLRDQRITEIARLVSNPGYFVSAVFKFIRLFER GTIAQKIIDMQIAEQNNVECVAA >Mature_262_residues SMKQAKNINEVILLLDQIIEKSKIDQSNLGLFAILYREVTVRVKEGIQNGSFQNGERMEKLDVIFANRYLKAYYEYQAKE KPSECWGFAFEQADKFWPIVLQHLLLGMNAHINLDLGIASAEICTVEDIKDLQADFDKINAILSNLVGGVEKCLIKIWPT LTWILKFTGKIDTFFIDFSMETARNGAWKFANEFVAVPENEREACIQLRDQRITEIARLVSNPGYFVSAVFKFIRLFERG TIAQKIIDMQIAEQNNVECVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30117; Mature: 29986
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMKQAKNINEVILLLDQIIEKSKIDQSNLGLFAILYREVTVRVKEGIQNGSFQNGERME CCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHH KLDVIFANRYLKAYYEYQAKEKPSECWGFAFEQADKFWPIVLQHLLLGMNAHINLDLGIA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEECC SAEICTVEDIKDLQADFDKINAILSNLVGGVEKCLIKIWPTLTWILKFTGKIDTFFIDFS CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEE METARNGAWKFANEFVAVPENEREACIQLRDQRITEIARLVSNPGYFVSAVFKFIRLFER HHHHCCCCHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC GTIAQKIIDMQIAEQNNVECVAA CHHHHHHHHHHHCCCCCCEEEEC >Mature Secondary Structure SMKQAKNINEVILLLDQIIEKSKIDQSNLGLFAILYREVTVRVKEGIQNGSFQNGERME CCHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHH KLDVIFANRYLKAYYEYQAKEKPSECWGFAFEQADKFWPIVLQHLLLGMNAHINLDLGIA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEECC SAEICTVEDIKDLQADFDKINAILSNLVGGVEKCLIKIWPTLTWILKFTGKIDTFFIDFS CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEE METARNGAWKFANEFVAVPENEREACIQLRDQRITEIARLVSNPGYFVSAVFKFIRLFER HHHHCCCCHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC GTIAQKIIDMQIAEQNNVECVAA CHHHHHHHHHHHCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA