| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300018
Identifier: 146300018
GI number: 146300018
Start: 2727678
End: 2728871
Strand: Direct
Name: 146300018
Synonym: Fjoh_2262
Alternate gene names: NA
Gene position: 2727678-2728871 (Clockwise)
Preceding gene: 146300017
Following gene: 146300019
Centisome position: 44.74
GC content: 22.95
Gene sequence:
>1194_bases ATGGAAAAGATTAAATTGATAAAATTTGCTTTATTATTTATTTGTTTCCTTACAATGATAAATTGTAAGGATGATAACAA AAGTGTGATTTCAAATATTAAAATAGAGACTACTAAAAAATATAAAGAAGTGGTTTTTACAAAAAAATATGAGAAAAGAG ATGGTGTAAAAGAATTAAATATTAGATATAAGAATTTTAAACTTAAGTTTAGATTTATTGAAGACATTACATTGTTACAA TTTATTGTAGATGATAACATTGTTTCTAATTGGAAACAAATTTTATTCAATTTTGAATATTTGCCTGATAACTATGATGG AATTAGATTATTATTTGATGAGAGTAATTCTAATGGATTATTATTATTGCCAGGTTATACAGAGGAGTTTCCTAATTTGA TTGTTTATGAATTTGATAAGAGTCATTTTTCATATTCTAATAATTCCAATATAAAGAATGAAGATTTAAATAAAATACCT TTTGAAAAATTAAATGAAGAATGGAAGAAAGGCTCTTTTGAAGCAAATAAAAAATCCAATAAATATTTTTTAACTTTTTT TGATGCTTCAAAAAAGACCAACTTAAATTTTGAAAACTCCAAATCTTATGAACTATTACAGGAAACAGAAATAAAAAAAT ATATAGATAAAGTTTTATTATTTGAAAAAGATAATTCTGATCATCAGTCTTTTCTTGAAGAATTTGAAAAGAGAATCGAA AAGGAAGGGTTCAAAATTATTTTTGACAAGAACTGTGATCTTAATGATGATAAAATTCAAGATAAAATACTTGTTTTTTC TAATGAATTAGCTGAAAATTTCAAGCCAAGTGATTACGAAGAATCTATTGTTTGTGTTTCTATTTTAGGAAAATTATATC AAAATAAAAATATTATTGTAAAACACTATATAGGTAATGTTGCAGTTGGGTTTAATGATATTAAAATAAAAGACAATTTT TTTACAATAGAACAAGTAAATAGTGATGGTTATTCAACGGTTAAAGAATACACGACATTTAAGTTTTTTAGAGAGATCAA TCAAATTATTCTTTATAAATATACTAGAATTGAAACTTCAAGGAGTGGAGAAAATGAGAGCGAAAAAAGCTATAATTATG AAGTGAAAAATTTCGGAAATATTTTATTTGAAGACTATAATTCTGAAACTATTTTAGAGAAGTGTAAGGGATAA
Upstream 100 bases:
>100_bases CCTGGGTTTTATGTGCACTTTAAAGGTGCATCAGAACAATCAAAACAAGAAAAAGACTTACAAAAGAAAATATCAGAAAA AGGAAAAACCATAGAGATTA
Downstream 100 bases:
>100_bases ATAAACTTTATGAGTGTAAAATTGTTGTAATTGATTATTCAAGGCAAAGAATTAGTTGAAGATTTTAATTTTTGGAATTC TTAATAGATTTCATCAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MEKIKLIKFALLFICFLTMINCKDDNKSVISNIKIETTKKYKEVVFTKKYEKRDGVKELNIRYKNFKLKFRFIEDITLLQ FIVDDNIVSNWKQILFNFEYLPDNYDGIRLLFDESNSNGLLLLPGYTEEFPNLIVYEFDKSHFSYSNNSNIKNEDLNKIP FEKLNEEWKKGSFEANKKSNKYFLTFFDASKKTNLNFENSKSYELLQETEIKKYIDKVLLFEKDNSDHQSFLEEFEKRIE KEGFKIIFDKNCDLNDDKIQDKILVFSNELAENFKPSDYEESIVCVSILGKLYQNKNIIVKHYIGNVAVGFNDIKIKDNF FTIEQVNSDGYSTVKEYTTFKFFREINQIILYKYTRIETSRSGENESEKSYNYEVKNFGNILFEDYNSETILEKCKG
Sequences:
>Translated_397_residues MEKIKLIKFALLFICFLTMINCKDDNKSVISNIKIETTKKYKEVVFTKKYEKRDGVKELNIRYKNFKLKFRFIEDITLLQ FIVDDNIVSNWKQILFNFEYLPDNYDGIRLLFDESNSNGLLLLPGYTEEFPNLIVYEFDKSHFSYSNNSNIKNEDLNKIP FEKLNEEWKKGSFEANKKSNKYFLTFFDASKKTNLNFENSKSYELLQETEIKKYIDKVLLFEKDNSDHQSFLEEFEKRIE KEGFKIIFDKNCDLNDDKIQDKILVFSNELAENFKPSDYEESIVCVSILGKLYQNKNIIVKHYIGNVAVGFNDIKIKDNF FTIEQVNSDGYSTVKEYTTFKFFREINQIILYKYTRIETSRSGENESEKSYNYEVKNFGNILFEDYNSETILEKCKG >Mature_397_residues MEKIKLIKFALLFICFLTMINCKDDNKSVISNIKIETTKKYKEVVFTKKYEKRDGVKELNIRYKNFKLKFRFIEDITLLQ FIVDDNIVSNWKQILFNFEYLPDNYDGIRLLFDESNSNGLLLLPGYTEEFPNLIVYEFDKSHFSYSNNSNIKNEDLNKIP FEKLNEEWKKGSFEANKKSNKYFLTFFDASKKTNLNFENSKSYELLQETEIKKYIDKVLLFEKDNSDHQSFLEEFEKRIE KEGFKIIFDKNCDLNDDKIQDKILVFSNELAENFKPSDYEESIVCVSILGKLYQNKNIIVKHYIGNVAVGFNDIKIKDNF FTIEQVNSDGYSTVKEYTTFKFFREINQIILYKYTRIETSRSGENESEKSYNYEVKNFGNILFEDYNSETILEKCKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47217; Mature: 47217
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKIKLIKFALLFICFLTMINCKDDNKSVISNIKIETTKKYKEVVFTKKYEKRDGVKELN CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCEEEEEHHHHHHHHHHHHHHHHCCCEEEE IRYKNFKLKFRFIEDITLLQFIVDDNIVSNWKQILFNFEYLPDNYDGIRLLFDESNSNGL EEEEEEEEEEEEEHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCCEEEEEECCCCCCE LLLPGYTEEFPNLIVYEFDKSHFSYSNNSNIKNEDLNKIPFEKLNEEWKKGSFEANKKSN EEECCCHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC KYFLTFFDASKKTNLNFENSKSYELLQETEIKKYIDKVLLFEKDNSDHQSFLEEFEKRIE EEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHH KEGFKIIFDKNCDLNDDKIQDKILVFSNELAENFKPSDYEESIVCVSILGKLYQNKNIIV HCCCEEEEECCCCCCCCHHHCEEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEE KHYIGNVAVGFNDIKIKDNFFTIEQVNSDGYSTVKEYTTFKFFREINQIILYKYTRIETS EEECCCEEECCEEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEECC RSGENESEKSYNYEVKNFGNILFEDYNSETILEKCKG CCCCCCCCCCCCEEHHHCCCEEEECCCCHHHHHHHCC >Mature Secondary Structure MEKIKLIKFALLFICFLTMINCKDDNKSVISNIKIETTKKYKEVVFTKKYEKRDGVKELN CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCEEEEEHHHHHHHHHHHHHHHHCCCEEEE IRYKNFKLKFRFIEDITLLQFIVDDNIVSNWKQILFNFEYLPDNYDGIRLLFDESNSNGL EEEEEEEEEEEEEHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCCEEEEEECCCCCCE LLLPGYTEEFPNLIVYEFDKSHFSYSNNSNIKNEDLNKIPFEKLNEEWKKGSFEANKKSN EEECCCHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC KYFLTFFDASKKTNLNFENSKSYELLQETEIKKYIDKVLLFEKDNSDHQSFLEEFEKRIE EEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHH KEGFKIIFDKNCDLNDDKIQDKILVFSNELAENFKPSDYEESIVCVSILGKLYQNKNIIV HCCCEEEEECCCCCCCCHHHCEEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEE KHYIGNVAVGFNDIKIKDNFFTIEQVNSDGYSTVKEYTTFKFFREINQIILYKYTRIETS EEECCCEEECCEEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEECC RSGENESEKSYNYEVKNFGNILFEDYNSETILEKCKG CCCCCCCCCCCCEEHHHCCCEEEECCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA