| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300019
Identifier: 146300019
GI number: 146300019
Start: 2729029
End: 2730189
Strand: Direct
Name: 146300019
Synonym: Fjoh_2263
Alternate gene names: NA
Gene position: 2729029-2730189 (Clockwise)
Preceding gene: 146300018
Following gene: 146300020
Centisome position: 44.76
GC content: 25.67
Gene sequence:
>1161_bases ATGAAAACATATAATTTATTACTATTTTGTTTTTTTACATTTTTTTTAAGCTGTAAAGACAAAGTAAATGATGAAAAAAT AGTCAACAATCAAAAAAAAGATAGTTTAAATATTGATGTAGCAGAAATAAAAAAAATAATACAGCTTCAGAAAAATGCAA ATTATATAGATTACCGTCCTGATAATCCTTATCTCCCTACAGAAAAAGATCTTCTGATTCTTATTCCATTTGTGGAGCAG GAATTAAAAAAAGCGGGCTATAAAACTTTACCAAGTAATCAGTTTGAAAGCAGAATAAAAAATCTTGTAAAAGATAATAA AACCAAAAACTACAATTCTTTTACTACAATTTTTTTAAATAAACTGGATAGGACGGATAAAACATTAAATGAATTTGAAT TTGATTTAAATAATCAATTTGCTGTTAAAAAATATAATTTTATGACTCCAATGCTGTTTTTGGAAGATGTTATAAAAATT AAAAAAGATAACAGCTATTCAATTAGTGTTCCTCATTATATAATTGCAAGAAATAAATATTTATTCAATGACAGCAAATC TGATTTGGACTGGCTTCTTGTTAATGATCAGGATTTTTTAAAAAGTTTAGTTAATTCTTTAGGATATGATAAAGAACCCC GAATAAATAAATTGTTGTTGGAAGATTATTATAAAATGCTTAGTACATCAAAGCCTTCTAAAAAAGAAAAAATAGGAGCA TTTTTCTTTACAATAGATCTCAATAATAATTTTTGTATTAGGCAAGGTTTGATTGATTATGTGAAAAATAATACTACTGT AAATGATAATAGACTTTTATATGCTTTAGACGATTATTCTTATGCTTTATATGGCGATAATTTGAATAAAATTTATGGAA GCGATGATCCTGCTAAAATGTTTAATGATGTAGATAAAGCTCATATTGTTGCTGTAATTGCAAGTATTGAGGTTCCTGCA ATTGTAAAGTATAAATCAGAGAATCCGGAATTATGGAATAATGTGGTATCAGCACTTTATAATCTTCTTGTGGCACATCC TGAAATAAAAGATATTATAATAAAAAACAATTATTTTGGTATAAAGAACATGAAGCAGGTTTTAGAGGACACTATTGATG AAATTGATGTGGATAAAATTAAAAGAGGTGAAGATTTCTAG
Upstream 100 bases:
>100_bases GAAGATTTTAATTTTTGGAATTCTTAATAGATTTCATCAATTAACACATGAGAGTATACTGTTGGGTACATATTCAAACA AGATAAAAAATAGATATTTT
Downstream 100 bases:
>100_bases ATTATGAAAAAAGATGCCTTACTACTACTTTGTTTTTTTGCATTTTTTTTAAGCTGTAAAGACAAAGTAAATGATGAAAA AATAGTCTACATTCAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MKTYNLLLFCFFTFFLSCKDKVNDEKIVNNQKKDSLNIDVAEIKKIIQLQKNANYIDYRPDNPYLPTEKDLLILIPFVEQ ELKKAGYKTLPSNQFESRIKNLVKDNKTKNYNSFTTIFLNKLDRTDKTLNEFEFDLNNQFAVKKYNFMTPMLFLEDVIKI KKDNSYSISVPHYIIARNKYLFNDSKSDLDWLLVNDQDFLKSLVNSLGYDKEPRINKLLLEDYYKMLSTSKPSKKEKIGA FFFTIDLNNNFCIRQGLIDYVKNNTTVNDNRLLYALDDYSYALYGDNLNKIYGSDDPAKMFNDVDKAHIVAVIASIEVPA IVKYKSENPELWNNVVSALYNLLVAHPEIKDIIIKNNYFGIKNMKQVLEDTIDEIDVDKIKRGEDF
Sequences:
>Translated_386_residues MKTYNLLLFCFFTFFLSCKDKVNDEKIVNNQKKDSLNIDVAEIKKIIQLQKNANYIDYRPDNPYLPTEKDLLILIPFVEQ ELKKAGYKTLPSNQFESRIKNLVKDNKTKNYNSFTTIFLNKLDRTDKTLNEFEFDLNNQFAVKKYNFMTPMLFLEDVIKI KKDNSYSISVPHYIIARNKYLFNDSKSDLDWLLVNDQDFLKSLVNSLGYDKEPRINKLLLEDYYKMLSTSKPSKKEKIGA FFFTIDLNNNFCIRQGLIDYVKNNTTVNDNRLLYALDDYSYALYGDNLNKIYGSDDPAKMFNDVDKAHIVAVIASIEVPA IVKYKSENPELWNNVVSALYNLLVAHPEIKDIIIKNNYFGIKNMKQVLEDTIDEIDVDKIKRGEDF >Mature_386_residues MKTYNLLLFCFFTFFLSCKDKVNDEKIVNNQKKDSLNIDVAEIKKIIQLQKNANYIDYRPDNPYLPTEKDLLILIPFVEQ ELKKAGYKTLPSNQFESRIKNLVKDNKTKNYNSFTTIFLNKLDRTDKTLNEFEFDLNNQFAVKKYNFMTPMLFLEDVIKI KKDNSYSISVPHYIIARNKYLFNDSKSDLDWLLVNDQDFLKSLVNSLGYDKEPRINKLLLEDYYKMLSTSKPSKKEKIGA FFFTIDLNNNFCIRQGLIDYVKNNTTVNDNRLLYALDDYSYALYGDNLNKIYGSDDPAKMFNDVDKAHIVAVIASIEVPA IVKYKSENPELWNNVVSALYNLLVAHPEIKDIIIKNNYFGIKNMKQVLEDTIDEIDVDKIKRGEDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45158; Mature: 45158
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTYNLLLFCFFTFFLSCKDKVNDEKIVNNQKKDSLNIDVAEIKKIIQLQKNANYIDYRP CCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECC DNPYLPTEKDLLILIPFVEQELKKAGYKTLPSNQFESRIKNLVKDNKTKNYNSFTTIFLN CCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH KLDRTDKTLNEFEFDLNNQFAVKKYNFMTPMLFLEDVIKIKKDNSYSISVPHYIIARNKY HHCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCCE LFNDSKSDLDWLLVNDQDFLKSLVNSLGYDKEPRINKLLLEDYYKMLSTSKPSKKEKIGA EECCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCEE FFFTIDLNNNFCIRQGLIDYVKNNTTVNDNRLLYALDDYSYALYGDNLNKIYGSDDPAKM EEEEEECCCCEEHHHHHHHHHHCCCEECCCEEEEEEECCEEEEECCCCCCCCCCCCHHHH FNDVDKAHIVAVIASIEVPAIVKYKSENPELWNNVVSALYNLLVAHPEIKDIIIKNNYFG HHCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHEEEEECCCCC IKNMKQVLEDTIDEIDVDKIKRGEDF HHHHHHHHHHHHHHCCHHHHHCCCCC >Mature Secondary Structure MKTYNLLLFCFFTFFLSCKDKVNDEKIVNNQKKDSLNIDVAEIKKIIQLQKNANYIDYRP CCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECC DNPYLPTEKDLLILIPFVEQELKKAGYKTLPSNQFESRIKNLVKDNKTKNYNSFTTIFLN CCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH KLDRTDKTLNEFEFDLNNQFAVKKYNFMTPMLFLEDVIKIKKDNSYSISVPHYIIARNKY HHCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCCE LFNDSKSDLDWLLVNDQDFLKSLVNSLGYDKEPRINKLLLEDYYKMLSTSKPSKKEKIGA EECCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCEE FFFTIDLNNNFCIRQGLIDYVKNNTTVNDNRLLYALDDYSYALYGDNLNKIYGSDDPAKM EEEEEECCCCEEHHHHHHHHHHCCCEECCCEEEEEEECCEEEEECCCCCCCCCCCCHHHH FNDVDKAHIVAVIASIEVPAIVKYKSENPELWNNVVSALYNLLVAHPEIKDIIIKNNYFG HHCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHEEEEECCCCC IKNMKQVLEDTIDEIDVDKIKRGEDF HHHHHHHHHHHHHHCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA