| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300015
Identifier: 146300015
GI number: 146300015
Start: 2723949
End: 2724812
Strand: Direct
Name: 146300015
Synonym: Fjoh_2259
Alternate gene names: NA
Gene position: 2723949-2724812 (Clockwise)
Preceding gene: 146300014
Following gene: 146300016
Centisome position: 44.68
GC content: 31.02
Gene sequence:
>864_bases ATGGAAAAAAACGAAGACAAAGAAAAAAAGAAACAACAGGTTTTATTTGTAAGCCAGGATTATATACTGCCGTTTCGGCC TCTTGAACTCAATCACGAGTATTCAGTTTTGTACACAATCGAAAAAGGAGATAAAAAAGAAACCTTTGAGCAAAATTTTA GTTTAAGGAGATTAAAACCTGACAGCAGTCAAAATAAATATCATTTTATTCAAATTGATAAAATATCAGAATTATTGGTT GATGGAAAACCCGTAGATTCAAGAGCTTACAAAGTGGCTGAAAAAACTGCCGAACTGCTGTATCCCTTAAGAATCGTGGT AAACAAATACGGAAAATGGGTAGACATAAATAGTTACTATAAACTAAAAGAACGCTGGGAAAATCAAAAAGAAGCCATTA AAGAACTATTTGATGGAAAAACCTTTGAGATGTTAGCCCAAAATATCGAAAATGCTATCGAAGATGACAAATCTCTAGTA GGATTAATTTCCGGAAATTGGTTTTTAAGAGCCTATTTTAATGGAATACACAGAGCCTATACCCGAAAGTTTGAAAGAGA AAGAACCTTGTATTTTCCTGTTGCTGCCGAAGTTGAGGATATTGAATTTTCGATTGTTCAAAAAGTAAATCCTTATTTAA ATGACTTAAACCAAATAGAAGTAACTCAAACAGGAGAATCAGAAAGTGAATATTTGAATGGAAACTATACAGCAGGATAT TTTTTAAATCCTAATAATTATATCATTGAGTATTTGCATTTAGAATGTGATTTTGAGGATATAGATCAAAGAAATACAAT AGAGGTTAAAAATCTGGACGAAAGTGAAATTTTTGTTGATTCAGGTATATCACTTTTAATATAA
Upstream 100 bases:
>100_bases AGGAAAAGTTTGACGAATTAAAAGAAACAGAAAAGGAAGCAGCTATAAAATAATCTTTGGAATCAATAAACATTTAAAAA TTTAACCGCCGTTAACGAAT
Downstream 100 bases:
>100_bases AATAAAAAAATATTCATTATGAGTTCAAAATATGTTGTTGTAGACGGTGCTTTGTGCAAGTGTAAGTTTAGTGAAGACAC AAAAGCCACTGATATTTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MEKNEDKEKKKQQVLFVSQDYILPFRPLELNHEYSVLYTIEKGDKKETFEQNFSLRRLKPDSSQNKYHFIQIDKISELLV DGKPVDSRAYKVAEKTAELLYPLRIVVNKYGKWVDINSYYKLKERWENQKEAIKELFDGKTFEMLAQNIENAIEDDKSLV GLISGNWFLRAYFNGIHRAYTRKFERERTLYFPVAAEVEDIEFSIVQKVNPYLNDLNQIEVTQTGESESEYLNGNYTAGY FLNPNNYIIEYLHLECDFEDIDQRNTIEVKNLDESEIFVDSGISLLI
Sequences:
>Translated_287_residues MEKNEDKEKKKQQVLFVSQDYILPFRPLELNHEYSVLYTIEKGDKKETFEQNFSLRRLKPDSSQNKYHFIQIDKISELLV DGKPVDSRAYKVAEKTAELLYPLRIVVNKYGKWVDINSYYKLKERWENQKEAIKELFDGKTFEMLAQNIENAIEDDKSLV GLISGNWFLRAYFNGIHRAYTRKFERERTLYFPVAAEVEDIEFSIVQKVNPYLNDLNQIEVTQTGESESEYLNGNYTAGY FLNPNNYIIEYLHLECDFEDIDQRNTIEVKNLDESEIFVDSGISLLI >Mature_287_residues MEKNEDKEKKKQQVLFVSQDYILPFRPLELNHEYSVLYTIEKGDKKETFEQNFSLRRLKPDSSQNKYHFIQIDKISELLV DGKPVDSRAYKVAEKTAELLYPLRIVVNKYGKWVDINSYYKLKERWENQKEAIKELFDGKTFEMLAQNIENAIEDDKSLV GLISGNWFLRAYFNGIHRAYTRKFERERTLYFPVAAEVEDIEFSIVQKVNPYLNDLNQIEVTQTGESESEYLNGNYTAGY FLNPNNYIIEYLHLECDFEDIDQRNTIEVKNLDESEIFVDSGISLLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33915; Mature: 33915
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKNEDKEKKKQQVLFVSQDYILPFRPLELNHEYSVLYTIEKGDKKETFEQNFSLRRLKP CCCCCHHHHHHHEEEEEECCCCCCCEEEECCCCEEEEEEEECCCCHHHHHHCCCEEEECC DSSQNKYHFIQIDKISELLVDGKPVDSRAYKVAEKTAELLYPLRIVVNKYGKWVDINSYY CCCCCCEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHH KLKERWENQKEAIKELFDGKTFEMLAQNIENAIEDDKSLVGLISGNWFLRAYFNGIHRAY HHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCEEEEHHHHHHHHHH TRKFERERTLYFPVAAEVEDIEFSIVQKVNPYLNDLNQIEVTQTGESESEYLNGNYTAGY HHHHHCCCEEEEEEECCCCHHHHHHHHHCCHHHCCCCEEEEEECCCCCHHHCCCCEEEEE FLNPNNYIIEYLHLECDFEDIDQRNTIEVKNLDESEIFVDSGISLLI EECCCCEEEEEEEEEECHHHCCCCCEEEEECCCCCCEEEECCCEECC >Mature Secondary Structure MEKNEDKEKKKQQVLFVSQDYILPFRPLELNHEYSVLYTIEKGDKKETFEQNFSLRRLKP CCCCCHHHHHHHEEEEEECCCCCCCEEEECCCCEEEEEEEECCCCHHHHHHCCCEEEECC DSSQNKYHFIQIDKISELLVDGKPVDSRAYKVAEKTAELLYPLRIVVNKYGKWVDINSYY CCCCCCEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHH KLKERWENQKEAIKELFDGKTFEMLAQNIENAIEDDKSLVGLISGNWFLRAYFNGIHRAY HHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCEEEEHHHHHHHHHH TRKFERERTLYFPVAAEVEDIEFSIVQKVNPYLNDLNQIEVTQTGESESEYLNGNYTAGY HHHHHCCCEEEEEEECCCCHHHHHHHHHCCHHHCCCCEEEEEECCCCCHHHCCCCEEEEE FLNPNNYIIEYLHLECDFEDIDQRNTIEVKNLDESEIFVDSGISLLI EECCCCEEEEEEEEEECHHHCCCCCEEEEECCCCCCEEEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA