Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146300014

Identifier: 146300014

GI number: 146300014

Start: 2722903

End: 2723901

Strand: Direct

Name: 146300014

Synonym: Fjoh_2258

Alternate gene names: NA

Gene position: 2722903-2723901 (Clockwise)

Preceding gene: 146300013

Following gene: 146300015

Centisome position: 44.66

GC content: 31.83

Gene sequence:

>999_bases
ATGGTAAAAAAACATGTATTGAGTCTTATTGATATCAGGCTCATTGTATTCTTAATTGTAATTGTGGCACTGTGTGCTAT
TCTAACCCTGCTGATTAGTGATAAAGTAGAAGATTTTGCGAAAAAGTACAAAAAGAAATTTTATGGATATATCTTATTAT
TTGTTTTAATCTATACCCTTATAGCATTTTTAGGATACAATAAACTCTTTATTGAACTTAGAAATGAATTTATTTTTTAT
CAGGCAGCTTCTTTGTTATTAGGAAGTTTACATGCATGGTTCTATCGTGAATTTTTTCAGGAGTTTAATCTAAAAAAATA
TAGTGTTGAGTTACTATTTTCTTTTATCGTTCCGCTGTATTCAAGCATTTTATTTGTCATTATTTATACATTTTTAAACG
GAATAAATTTTACGCTTTTAATGAGCGCGCATTTTTTGGTCTTCGTTATTCCAACTTGTATCTATATGGTATTTTGTTTT
ATGATGCTGATACCGCCAAGAAAATATATTACATGGACCCCCGAAAAATCGTATTCAGCAATAAAAGACGACGAAATGGA
GGCTATTGTATTGATTACTTTTTTAATAAAGAAAAGTTACGATGATACAGAATATACTTCAATAAGAGTACAAGCCCCTG
TGAAAGTAAGTTTTGGACGCTTGTTTTTTCTTGCCGTTGCAGGATATAACAGGCAAAACGAAGGTGAACATATCGATTTG
CAGATGCCTGATGGAAAAGACTATAACTGGGTATTTTATTTACAGTCTAAATGGTATGAAAACACCCGCTATATAGATGC
TGCATACGATGGAGCAATGAATCAAATTACAGAAAACTCAGTAGTAATATGCCAGCGTGAAATTGAGAAAAATGCACCTC
CGGAAAAAAAGAAAAAAACAGATCAAAAACTGTATGGTGTCGATTCGCATAATGAGGGGGCTGATCAGGAAAAGTTTGAC
GAATTAAAAGAAACAGAAAAGGAAGCAGCTATAAAATAA

Upstream 100 bases:

>100_bases
TTTTATTTAAATGAAATAAAAAGACTACATTAGTCGCAATAACAAAGTGTAGGTTATAATCTACATTTTGTTTTAGTGAA
TTTATATATGATAGTTTGAA

Downstream 100 bases:

>100_bases
TCTTTGGAATCAATAAACATTTAAAAATTTAACCGCCGTTAACGAATATGGAAAAAAACGAAGACAAAGAAAAAAAGAAA
CAACAGGTTTTATTTGTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MVKKHVLSLIDIRLIVFLIVIVALCAILTLLISDKVEDFAKKYKKKFYGYILLFVLIYTLIAFLGYNKLFIELRNEFIFY
QAASLLLGSLHAWFYREFFQEFNLKKYSVELLFSFIVPLYSSILFVIIYTFLNGINFTLLMSAHFLVFVIPTCIYMVFCF
MMLIPPRKYITWTPEKSYSAIKDDEMEAIVLITFLIKKSYDDTEYTSIRVQAPVKVSFGRLFFLAVAGYNRQNEGEHIDL
QMPDGKDYNWVFYLQSKWYENTRYIDAAYDGAMNQITENSVVICQREIEKNAPPEKKKKTDQKLYGVDSHNEGADQEKFD
ELKETEKEAAIK

Sequences:

>Translated_332_residues
MVKKHVLSLIDIRLIVFLIVIVALCAILTLLISDKVEDFAKKYKKKFYGYILLFVLIYTLIAFLGYNKLFIELRNEFIFY
QAASLLLGSLHAWFYREFFQEFNLKKYSVELLFSFIVPLYSSILFVIIYTFLNGINFTLLMSAHFLVFVIPTCIYMVFCF
MMLIPPRKYITWTPEKSYSAIKDDEMEAIVLITFLIKKSYDDTEYTSIRVQAPVKVSFGRLFFLAVAGYNRQNEGEHIDL
QMPDGKDYNWVFYLQSKWYENTRYIDAAYDGAMNQITENSVVICQREIEKNAPPEKKKKTDQKLYGVDSHNEGADQEKFD
ELKETEKEAAIK
>Mature_332_residues
MVKKHVLSLIDIRLIVFLIVIVALCAILTLLISDKVEDFAKKYKKKFYGYILLFVLIYTLIAFLGYNKLFIELRNEFIFY
QAASLLLGSLHAWFYREFFQEFNLKKYSVELLFSFIVPLYSSILFVIIYTFLNGINFTLLMSAHFLVFVIPTCIYMVFCF
MMLIPPRKYITWTPEKSYSAIKDDEMEAIVLITFLIKKSYDDTEYTSIRVQAPVKVSFGRLFFLAVAGYNRQNEGEHIDL
QMPDGKDYNWVFYLQSKWYENTRYIDAAYDGAMNQITENSVVICQREIEKNAPPEKKKKTDQKLYGVDSHNEGADQEKFD
ELKETEKEAAIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38981; Mature: 38981

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKHVLSLIDIRLIVFLIVIVALCAILTLLISDKVEDFAKKYKKKFYGYILLFVLIYTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAFLGYNKLFIELRNEFIFYQAASLLLGSLHAWFYREFFQEFNLKKYSVELLFSFIVPLY
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
SSILFVIIYTFLNGINFTLLMSAHFLVFVIPTCIYMVFCFMMLIPPRKYITWTPEKSYSA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCC
IKDDEMEAIVLITFLIKKSYDDTEYTSIRVQAPVKVSFGRLFFLAVAGYNRQNEGEHIDL
CCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEHHHHHHHHHHHCCCCCCCCCEEEE
QMPDGKDYNWVFYLQSKWYENTRYIDAAYDGAMNQITENSVVICQREIEKNAPPEKKKKT
ECCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHCCCCEEEEEHHHHCCCCCCHHHHH
DQKLYGVDSHNEGADQEKFDELKETEKEAAIK
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKKHVLSLIDIRLIVFLIVIVALCAILTLLISDKVEDFAKKYKKKFYGYILLFVLIYTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAFLGYNKLFIELRNEFIFYQAASLLLGSLHAWFYREFFQEFNLKKYSVELLFSFIVPLY
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
SSILFVIIYTFLNGINFTLLMSAHFLVFVIPTCIYMVFCFMMLIPPRKYITWTPEKSYSA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCC
IKDDEMEAIVLITFLIKKSYDDTEYTSIRVQAPVKVSFGRLFFLAVAGYNRQNEGEHIDL
CCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEHHHHHHHHHHHCCCCCCCCCEEEE
QMPDGKDYNWVFYLQSKWYENTRYIDAAYDGAMNQITENSVVICQREIEKNAPPEKKKKT
ECCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHCCCCEEEEEHHHHCCCCCCHHHHH
DQKLYGVDSHNEGADQEKFDELKETEKEAAIK
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA