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The map label for this gene is rfaB [C]

Identifier: 146299999

GI number: 146299999

Start: 2698561

End: 2699652

Strand: Direct

Name: rfaB [C]

Synonym: Fjoh_2243

Alternate gene names: 146299999

Gene position: 2698561-2699652 (Clockwise)

Preceding gene: 146299998

Following gene: 146300002

Centisome position: 44.26

GC content: 29.58

Gene sequence:

>1092_bases
ATGAAATTACTCTACATAACACAAAGGGCAAATGAAGAAGGAGGAGTACAGAGAGTACTTTCAATAAAAACCAATTATTT
AATCGAAAAGTTTAATTATGAGGTTTGTATTATTACTCAAAATGGAGGGAATGATGATCTGTTTTTTGAGTTTAATGAAA
AGATAGAATTTCATGATATTATACTAAAAAGTAATAAGATATTCAATTTACTTCATTATAAAAAAGCACTGCTGGAACAC
ATCAAAAAAATACAGCCCGATTGTATTATTGTTTGTGATTTTGCTTTAAAATCGTTTTCAATTCCTCTGTTTATTAAAAC
CCAAATTCCTATCATTTTTGAAGCGCATGGTTCTAAATTTAATGAATATAAAGAGTCTCGCTTTTTTGGTTTTATTAATA
ACCTTAAGTACAAATACCGAAATTATTGTGCTTCGCAATTTTTGTATTTTACTGCATTATCACAAGAAAGCCTTAACGAA
TGGTCGGTCAAAAACGGAATTGTAATTTCTAATCCTTTATGGATAGAAACAAGATCTTTTTCTGATCTGGAATCAAAAAA
AATTATTGCCGTAGCAAGACATTCTTATGAGAAAGGAATCGACAGGTTATTGGAAATATGGCAATTAATTTCTGAAAAAC
ATCCTGACTGGCAATTGGAAATTTATGGTAAACCAAGCGAAGATTTACAATTTTTAAACTTGGCAAAAAAATTAAAGATT
GAAAAAAATACCAAATTTTTAGATCCGGTAAAAGATATTGCCGAAAAATATAAAACCGCATCAATATTGGTTATGACTTC
CAGAAACGAAGCGCAGCCGATGGTTTTAATTGAAGGGATGGCTTGTGGTCTGCCTTCTGTTGCTTATGATTGTCCTATTG
GTCCAAGAACAATTATACAAAATAATAAAAACGGATTTTTGATAGAAGATGGAAATAAAGATTCTTTTGTTGAAAAATTA
AATCTTTTAATAAAAAATCGCAATTTGAGAATTAATATGGGCTTGGAAGCACAACAAAGTGTTCAAAAATATAATTTGGA
TTCCATAATGCATCAATGGAAGTCCTTGTTTGAATCAATAACAAAGTCTTAG

Upstream 100 bases:

>100_bases
AAAATTTTTCATCTGGAGCAGTTTGTCTCGTTTTAGCTTCGGAAATTTTTGATGAAGATGATTATTTAAGGGATTATAAT
GATTTTTTGAAATCAAAAAA

Downstream 100 bases:

>100_bases
TTTATACTGCAATAATACCCCAAACGATAAAGATCAAAAAGCAAAAGAGAAGGGTTTTTGCTAAAGAGCTGTTTTACAAA
TAAAGATTTGAAAACTCTAA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKLLYITQRANEEGGVQRVLSIKTNYLIEKFNYEVCIITQNGGNDDLFFEFNEKIEFHDIILKSNKIFNLLHYKKALLEH
IKKIQPDCIIVCDFALKSFSIPLFIKTQIPIIFEAHGSKFNEYKESRFFGFINNLKYKYRNYCASQFLYFTALSQESLNE
WSVKNGIVISNPLWIETRSFSDLESKKIIAVARHSYEKGIDRLLEIWQLISEKHPDWQLEIYGKPSEDLQFLNLAKKLKI
EKNTKFLDPVKDIAEKYKTASILVMTSRNEAQPMVLIEGMACGLPSVAYDCPIGPRTIIQNNKNGFLIEDGNKDSFVEKL
NLLIKNRNLRINMGLEAQQSVQKYNLDSIMHQWKSLFESITKS

Sequences:

>Translated_363_residues
MKLLYITQRANEEGGVQRVLSIKTNYLIEKFNYEVCIITQNGGNDDLFFEFNEKIEFHDIILKSNKIFNLLHYKKALLEH
IKKIQPDCIIVCDFALKSFSIPLFIKTQIPIIFEAHGSKFNEYKESRFFGFINNLKYKYRNYCASQFLYFTALSQESLNE
WSVKNGIVISNPLWIETRSFSDLESKKIIAVARHSYEKGIDRLLEIWQLISEKHPDWQLEIYGKPSEDLQFLNLAKKLKI
EKNTKFLDPVKDIAEKYKTASILVMTSRNEAQPMVLIEGMACGLPSVAYDCPIGPRTIIQNNKNGFLIEDGNKDSFVEKL
NLLIKNRNLRINMGLEAQQSVQKYNLDSIMHQWKSLFESITKS
>Mature_363_residues
MKLLYITQRANEEGGVQRVLSIKTNYLIEKFNYEVCIITQNGGNDDLFFEFNEKIEFHDIILKSNKIFNLLHYKKALLEH
IKKIQPDCIIVCDFALKSFSIPLFIKTQIPIIFEAHGSKFNEYKESRFFGFINNLKYKYRNYCASQFLYFTALSQESLNE
WSVKNGIVISNPLWIETRSFSDLESKKIIAVARHSYEKGIDRLLEIWQLISEKHPDWQLEIYGKPSEDLQFLNLAKKLKI
EKNTKFLDPVKDIAEKYKTASILVMTSRNEAQPMVLIEGMACGLPSVAYDCPIGPRTIIQNNKNGFLIEDGNKDSFVEKL
NLLIKNRNLRINMGLEAQQSVQKYNLDSIMHQWKSLFESITKS

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI226510984, Length=341, Percent_Identity=24.3401759530792, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 42252; Mature: 42252

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLYITQRANEEGGVQRVLSIKTNYLIEKFNYEVCIITQNGGNDDLFFEFNEKIEFHDI
CEEEEEEECCCCCCCHHHHHHHHHHHEEEECCCEEEEEECCCCCCCEEEEECCCEEEEEE
ILKSNKIFNLLHYKKALLEHIKKIQPDCIIVCDFALKSFSIPLFIKTQIPIIFEAHGSKF
EEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCEEEEECCCEEEEECCCCH
NEYKESRFFGFINNLKYKYRNYCASQFLYFTALSQESLNEWSVKNGIVISNPLWIETRSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHCCHHHCCCCEEECCCEEEEECCC
SDLESKKIIAVARHSYEKGIDRLLEIWQLISEKHPDWQLEIYGKPSEDLQFLNLAKKLKI
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHEE
EKNTKFLDPVKDIAEKYKTASILVMTSRNEAQPMVLIEGMACGLPSVAYDCPIGPRTIIQ
CCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCEEEEECCCCCCCCCEEECCCCCHHHEE
NNKNGFLIEDGNKDSFVEKLNLLIKNRNLRINMGLEAQQSVQKYNLDSIMHQWKSLFESI
CCCCEEEEECCCCHHHHHHHHHHEECCCEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHH
TKS
HCC
>Mature Secondary Structure
MKLLYITQRANEEGGVQRVLSIKTNYLIEKFNYEVCIITQNGGNDDLFFEFNEKIEFHDI
CEEEEEEECCCCCCCHHHHHHHHHHHEEEECCCEEEEEECCCCCCCEEEEECCCEEEEEE
ILKSNKIFNLLHYKKALLEHIKKIQPDCIIVCDFALKSFSIPLFIKTQIPIIFEAHGSKF
EEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCEEEEECCCEEEEECCCCH
NEYKESRFFGFINNLKYKYRNYCASQFLYFTALSQESLNEWSVKNGIVISNPLWIETRSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHCCHHHCCCCEEECCCEEEEECCC
SDLESKKIIAVARHSYEKGIDRLLEIWQLISEKHPDWQLEIYGKPSEDLQFLNLAKKLKI
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHEE
EKNTKFLDPVKDIAEKYKTASILVMTSRNEAQPMVLIEGMACGLPSVAYDCPIGPRTIIQ
CCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCEEEEECCCCCCCCCEEECCCCCHHHEE
NNKNGFLIEDGNKDSFVEKLNLLIKNRNLRINMGLEAQQSVQKYNLDSIMHQWKSLFESI
CCCCEEEEECCCCHHHHHHHHHHEECCCEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHH
TKS
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]