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The map label for this gene is blc [C]

Identifier: 146299890

GI number: 146299890

Start: 2584127

End: 2584669

Strand: Direct

Name: blc [C]

Synonym: Fjoh_2134

Alternate gene names: 146299890

Gene position: 2584127-2584669 (Clockwise)

Preceding gene: 146299889

Following gene: 146299893

Centisome position: 42.38

GC content: 33.33

Gene sequence:

>543_bases
ATGAAAAGTAAATATATAGTTCCAGTTTTGATTGGAGCAGGAATTGGTCTCGCATTGTATTCTTGCGGAGGAGGAATTCC
AGAGAAAGCAAAAGCTGTAACAAATTTTGACAGCGCAAAATATCTCGGAAAATGGTATGAAATTGCCAGATTAGATTACA
AATGGGAAAGAGATTTGAACAATGTAACAGCCGAGTATTCTTTAAACGAAGATAAAACTATAAAAGTCGATAATAAGGGC
TATAATGTCAAAAAAGACAAATGGGAACAAAGTGTCGGGAAAGCTAAATTTGTCAAAAAAGACAACATTGGTATGCTAAA
AGTCTCATTTTTTGGTCCTTTTTATTCTGGTTACAATGTCGTAGCAATCGATCCTGATTATAAATATGCACTTGTAGCTG
GAGAAAGTTTAAAATATATGTGGATACTTTCCAGAGAAAAAACAATTCCGGAAAGTGTAAAAGCAGATTTTCTTATCAAA
GCTCAGGAAATCGGATATAAAGTAACTGATTTGGTTTGGGTAAAGCATGATAAGTTGAATTAA

Upstream 100 bases:

>100_bases
AATATTTTTAAGCGTTATATAATATAATAATCAAAAATAATTTTGTAAATTAGATGTAGATTTCAGGTGCTATCTTTATG
ATAATTAAAAAGATAGTATT

Downstream 100 bases:

>100_bases
ATAAAAACGCCGATATTTTAAATATCGGCGTTTTTTATTTTTATCTGTATGAATCAAGGAGTAAATACAGTTTTATAATT
ATCCCAATATCTGTAAATCA

Product: Lipocalin family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKSKYIVPVLIGAGIGLALYSCGGGIPEKAKAVTNFDSAKYLGKWYEIARLDYKWERDLNNVTAEYSLNEDKTIKVDNKG
YNVKKDKWEQSVGKAKFVKKDNIGMLKVSFFGPFYSGYNVVAIDPDYKYALVAGESLKYMWILSREKTIPESVKADFLIK
AQEIGYKVTDLVWVKHDKLN

Sequences:

>Translated_180_residues
MKSKYIVPVLIGAGIGLALYSCGGGIPEKAKAVTNFDSAKYLGKWYEIARLDYKWERDLNNVTAEYSLNEDKTIKVDNKG
YNVKKDKWEQSVGKAKFVKKDNIGMLKVSFFGPFYSGYNVVAIDPDYKYALVAGESLKYMWILSREKTIPESVKADFLIK
AQEIGYKVTDLVWVKHDKLN
>Mature_180_residues
MKSKYIVPVLIGAGIGLALYSCGGGIPEKAKAVTNFDSAKYLGKWYEIARLDYKWERDLNNVTAEYSLNEDKTIKVDNKG
YNVKKDKWEQSVGKAKFVKKDNIGMLKVSFFGPFYSGYNVVAIDPDYKYALVAGESLKYMWILSREKTIPESVKADFLIK
AQEIGYKVTDLVWVKHDKLN

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Escherichia coli, GI1790592, Length=172, Percent_Identity=45.3488372093023, Blast_Score=166, Evalue=7e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272
- InterPro:   IPR002449 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 20457; Mature: 20457

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKYIVPVLIGAGIGLALYSCGGGIPEKAKAVTNFDSAKYLGKWYEIARLDYKWERDLN
CCCCEEEEEEECCCHHEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEECCCCC
NVTAEYSLNEDKTIKVDNKGYNVKKDKWEQSVGKAKFVKKDNIGMLKVSFFGPFYSGYNV
CEEEEEECCCCCEEEECCCCCCCCHHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCEE
VAIDPDYKYALVAGESLKYMWILSREKTIPESVKADFLIKAQEIGYKVTDLVWVKHDKLN
EEECCCCEEEEEECCCEEEEEEEECCCCCCCCCCCEEEEEHHHCCEEEEEEEEEEECCCC
>Mature Secondary Structure
MKSKYIVPVLIGAGIGLALYSCGGGIPEKAKAVTNFDSAKYLGKWYEIARLDYKWERDLN
CCCCEEEEEEECCCHHEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEECCCCC
NVTAEYSLNEDKTIKVDNKGYNVKKDKWEQSVGKAKFVKKDNIGMLKVSFFGPFYSGYNV
CEEEEEECCCCCEEEECCCCCCCCHHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCEE
VAIDPDYKYALVAGESLKYMWILSREKTIPESVKADFLIKAQEIGYKVTDLVWVKHDKLN
EEECCCCEEEEEECCCEEEEEEEECCCCCCCCCCCEEEEEHHHCCEEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7559452 [H]