| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is pabB [H]
Identifier: 146299893
GI number: 146299893
Start: 2586400
End: 2587686
Strand: Direct
Name: pabB [H]
Synonym: Fjoh_2137
Alternate gene names: 146299893
Gene position: 2586400-2587686 (Clockwise)
Preceding gene: 146299890
Following gene: 146299894
Centisome position: 42.42
GC content: 33.64
Gene sequence:
>1287_bases TTGAGAGTTTCTATTCATAAACATATTTCAAATCCTTTTGATTTTAAACAACAGCTATTAAGCTGGTCACAGCAGTTTCG AGAGGTTGTTTTTCTGGAAGGCAATGGCTATCCTGAGCAATATTCAAGTTTTGACTGTATTCTTGCTGTTGATGCTTTTA CATCAATTAAAACTGATTTTCATAATGCATTCGAAGATTTAAAACAATACCAGCAAACCACTAAGGACTGGTTGTTTGGC TATTTGTCGTATGACTTAAAAAATGATATTGAAGATTTAAAATCCAACAATTTTGACGGATTAGAATTTCCGGATTTGTT TTTCTTTCAGCCCAAAAAAGTATTTCTGCTTAAAGGAAATGAACTGGAAATACAATATCTGCTTTTTTGTAATGATGAAT TTGAAGATGATTTTAATGAGATAGTCGAAAATCAAAAGTCAAAAGCTGAAAGTTCTGCGTCTATAAAAATTGAACAGCGT ATTTCAAAAGATTTATACGTAGAAAAAGTAAACCAAATGCTTCATCATATTCATATTGGTGATATGTATGAAGCCAATTT CTGTATGGAATTTTATGCTGAAAATGTTGTTATAGATCCTCAGGAAAAATTCAGAAAACTAAATGAAATTTCGCAGGCGC CATTTTCGGTTTTCTTTAAAAATCATAAACATTTTCTGCTTTCGGCATCGCCGGAACGCTATTTAAAAAAAGTTGGAGAA ACTATTATTTCCCAGCCCATAAAAGGAACTTCAAAAAGAGCTGCAGACCCTGTAGAAGATGAAAAATCAAAAGTCATGCT GGCTTCAGATGAAAAAGAACGTGCAGAGAATATTATGATAACTGATTTGGTACGTAATGATCTTTCACATACAGCTCAAA AAGGTTCTGTTGAGGTAAAAGAACTCTGCGGTATTTATTCATTTCTGCAGGTGCATCAAATGATTTCGACCGTTGTTTCA AAATTAGACAAACAATATTCGGCTGTAGATGTTTTAAAATCTACTTTTCCAATGGGAAGCATGACTGGAGCACCAAAAAT TTCGGTAATGAAAATCATCGAAAATCTGGAAGAAACTAAACGCGGACTTTACAGTGGTGCTGTAGGATATTTTACGCCGG AAGGGGATTTTGATTTTAATGTGGTAATTAGAAGCATATTATACAATCAGGAAAAACAATATGTTTCGTTTTCGGTAGGA AGCGCTATAACATCTAAGTCGATCCCTGAAAAAGAATATGAAGAATGTTTGCTGAAAGCCAGAGCAATGCACGAAGTTTT GCGATAA
Upstream 100 bases:
>100_bases TCAAAAACGATATACTAAAAAGCGTGCCAATAATTTTAAGATATTCTTTTTATTGAAGGATTTTTTTTGTTGTAATTTTG AAGTTTAAAAAATATCATTT
Downstream 100 bases:
>100_bases TTTTTTTCGCTGTTAATGTCACGAATTTGCACGAATTACTTTTTTTGCCACAGATTAAAAGATTTACACAGATTTTTTTA ATCCTTTAATCTGCGACTAA
Product: anthranilate synthase component I/chorismate-binding protein
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MRVSIHKHISNPFDFKQQLLSWSQQFREVVFLEGNGYPEQYSSFDCILAVDAFTSIKTDFHNAFEDLKQYQQTTKDWLFG YLSYDLKNDIEDLKSNNFDGLEFPDLFFFQPKKVFLLKGNELEIQYLLFCNDEFEDDFNEIVENQKSKAESSASIKIEQR ISKDLYVEKVNQMLHHIHIGDMYEANFCMEFYAENVVIDPQEKFRKLNEISQAPFSVFFKNHKHFLLSASPERYLKKVGE TIISQPIKGTSKRAADPVEDEKSKVMLASDEKERAENIMITDLVRNDLSHTAQKGSVEVKELCGIYSFLQVHQMISTVVS KLDKQYSAVDVLKSTFPMGSMTGAPKISVMKIIENLEETKRGLYSGAVGYFTPEGDFDFNVVIRSILYNQEKQYVSFSVG SAITSKSIPEKEYEECLLKARAMHEVLR
Sequences:
>Translated_428_residues MRVSIHKHISNPFDFKQQLLSWSQQFREVVFLEGNGYPEQYSSFDCILAVDAFTSIKTDFHNAFEDLKQYQQTTKDWLFG YLSYDLKNDIEDLKSNNFDGLEFPDLFFFQPKKVFLLKGNELEIQYLLFCNDEFEDDFNEIVENQKSKAESSASIKIEQR ISKDLYVEKVNQMLHHIHIGDMYEANFCMEFYAENVVIDPQEKFRKLNEISQAPFSVFFKNHKHFLLSASPERYLKKVGE TIISQPIKGTSKRAADPVEDEKSKVMLASDEKERAENIMITDLVRNDLSHTAQKGSVEVKELCGIYSFLQVHQMISTVVS KLDKQYSAVDVLKSTFPMGSMTGAPKISVMKIIENLEETKRGLYSGAVGYFTPEGDFDFNVVIRSILYNQEKQYVSFSVG SAITSKSIPEKEYEECLLKARAMHEVLR >Mature_428_residues MRVSIHKHISNPFDFKQQLLSWSQQFREVVFLEGNGYPEQYSSFDCILAVDAFTSIKTDFHNAFEDLKQYQQTTKDWLFG YLSYDLKNDIEDLKSNNFDGLEFPDLFFFQPKKVFLLKGNELEIQYLLFCNDEFEDDFNEIVENQKSKAESSASIKIEQR ISKDLYVEKVNQMLHHIHIGDMYEANFCMEFYAENVVIDPQEKFRKLNEISQAPFSVFFKNHKHFLLSASPERYLKKVGE TIISQPIKGTSKRAADPVEDEKSKVMLASDEKERAENIMITDLVRNDLSHTAQKGSVEVKELCGIYSFLQVHQMISTVVS KLDKQYSAVDVLKSTFPMGSMTGAPKISVMKIIENLEETKRGLYSGAVGYFTPEGDFDFNVVIRSILYNQEKQYVSFSVG SAITSKSIPEKEYEECLLKARAMHEVLR
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=349, Percent_Identity=33.5243553008596, Blast_Score=198, Evalue=7e-52, Organism=Escherichia coli, GI1787518, Length=401, Percent_Identity=27.930174563591, Blast_Score=136, Evalue=2e-33, Organism=Escherichia coli, GI1786809, Length=220, Percent_Identity=26.8181818181818, Blast_Score=76, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6320935, Length=272, Percent_Identity=29.7794117647059, Blast_Score=131, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6324361, Length=280, Percent_Identity=32.8571428571429, Blast_Score=123, Evalue=5e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 - InterPro: IPR005802 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 49451; Mature: 49451
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVSIHKHISNPFDFKQQLLSWSQQFREVVFLEGNGYPEQYSSFDCILAVDAFTSIKTDF CCEEEHHHHCCHHHHHHHHHHHHHHHHEEEEECCCCCCHHHCCCCEEEEEHHHHHHHHHH HNAFEDLKQYQQTTKDWLFGYLSYDLKNDIEDLKSNNFDGLEFPDLFFFQPKKVFLLKGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECC ELEIQYLLFCNDEFEDDFNEIVENQKSKAESSASIKIEQRISKDLYVEKVNQMLHHIHIG CEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCC DMYEANFCMEFYAENVVIDPQEKFRKLNEISQAPFSVFFKNHKHFLLSASPERYLKKVGE CCHHHHHHHHHHHCCCEECCHHHHHHHHHHHHCCHHHHHHCCCEEEEECCHHHHHHHHHH TIISQPIKGTSKRAADPVEDEKSKVMLASDEKERAENIMITDLVRNDLSHTAQKGSVEVK HHHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCCHHHHHHHHHHHHHHHCCCCHHH ELCGIYSFLQVHQMISTVVSKLDKQYSAVDVLKSTFPMGSMTGAPKISVMKIIENLEETK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH RGLYSGAVGYFTPEGDFDFNVVIRSILYNQEKQYVSFSVGSAITSKSIPEKEYEECLLKA HHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHEEEEEHHHHHHHCCCCHHHHHHHHHHH RAMHEVLR HHHHHHHC >Mature Secondary Structure MRVSIHKHISNPFDFKQQLLSWSQQFREVVFLEGNGYPEQYSSFDCILAVDAFTSIKTDF CCEEEHHHHCCHHHHHHHHHHHHHHHHEEEEECCCCCCHHHCCCCEEEEEHHHHHHHHHH HNAFEDLKQYQQTTKDWLFGYLSYDLKNDIEDLKSNNFDGLEFPDLFFFQPKKVFLLKGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECC ELEIQYLLFCNDEFEDDFNEIVENQKSKAESSASIKIEQRISKDLYVEKVNQMLHHIHIG CEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCC DMYEANFCMEFYAENVVIDPQEKFRKLNEISQAPFSVFFKNHKHFLLSASPERYLKKVGE CCHHHHHHHHHHHCCCEECCHHHHHHHHHHHHCCHHHHHHCCCEEEEECCHHHHHHHHHH TIISQPIKGTSKRAADPVEDEKSKVMLASDEKERAENIMITDLVRNDLSHTAQKGSVEVK HHHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCCHHHHHHHHHHHHHHHCCCCHHH ELCGIYSFLQVHQMISTVVSKLDKQYSAVDVLKSTFPMGSMTGAPKISVMKIIENLEETK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH RGLYSGAVGYFTPEGDFDFNVVIRSILYNQEKQYVSFSVGSAITSKSIPEKEYEECLLKA HHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHEEEEEHHHHHHHCCCCHHHHHHHHHHH RAMHEVLR HHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3057324; 2251281 [H]