| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is celB [H]
Identifier: 146299837
GI number: 146299837
Start: 2465322
End: 2466416
Strand: Direct
Name: celB [H]
Synonym: Fjoh_2079
Alternate gene names: 146299837
Gene position: 2465322-2466416 (Clockwise)
Preceding gene: 146299836
Following gene: 146299838
Centisome position: 40.44
GC content: 35.89
Gene sequence:
>1095_bases ATGAAAAGTAAACAATATATTTTAGGAGTATTAACCGCTTTGCTGTTTGCCTCTTGCAGCAACGATGAAAAAGTAGTTTT GAAATATGCAGATGAAGGCGATTCAGGCAATCCGAATCCGATTACGCAGACTTTAAAAGAAAAAGCAAAATTTAAAATTG GAGCTGCTGTAAAAATGAAAGATCTCCAAAACGAAGCCAATTATAAAAATGCTGTTTTAAAACATTACAATCAGATTACA GCCGAATTTGAAATGAAAATGGCAAGCATCTGGACATCTTCAACAGCATATAATTATACTGCAGCGGATTATTTAGTAGG ATTTGCCCAAGATAATAAGATGGAAGTTCACGGACATACTTTGGTTTGGTACGATTCATTTCCGGAATGGTTTAAAAAAG CCCAATACGATTCGATTGCATTTGAAGCCAAAGTAAAAGTCTACATTACTGATGTCGTAGGACGCTACAAAGGAAAAGTA AAAAGCTGGGATGTTGTTAATGAAGTTTTTGCAGACGGCGGTGCCATGAGAAACGAAACGGTTATCAATTCACTGTTTAA AGATCCAATTGGATTTTACGGAAGATGTTTTCGCTATGCAAAAGCTGCAGATCCTGATGCTAAATTATTTTACAACGATT ACAGCGTAGTTCTGGATGCAGGAAAAAGAGCCTCAATCAAAAAAATGGTAGCAAGATTCAAGGCAAACGGAGTACCAATT GACGGTTTAGGAGATCAGTTTCATTATGCCACAGATACCAACAGGCAAACGATGAAAACCGGTTTTACAGATCTTGCTTC AACAGGATTGTTAATTCATATTTCAGAGTTGGATATTAAAGTCAATACTGGAAAATCAGATTCGTATGTTTTTAATGATG TTGAAAATCAGAAACAGGCAGAAACCTATAAATACATTACAACTATGTATGAAGAGCTGCCTCAAACCCAAAAGTTTGCC ATTTCAACCTGGGGAGTAACAGATAAATATACATGGCTTACAAGTTTCTGGCACTCAAAAGAATATCCATTGCTTTTAGA TGCTGATTATAATAAAAAACCAGCTTATCAGGGATTCTTAGACGGATTGAAGTAG
Upstream 100 bases:
>100_bases TTAGAAAAATATATAGAATGAGTTAAGGTTAAAGTTAGTAATAACCCGTCCGGAAGTTAGAATATTCCTGATCTGACTTC CGGATTTAAAAAGAAAACAC
Downstream 100 bases:
>100_bases AATTTTAGAATAAAGAGAATAGAATATAGAAAAGAAAAAATTCTAAGAAAAGTCTTTTCTCTATGTTCTTTCTTTTATTC TCTAAAAAATTAACCAAAAA
Product: endo-1,4-beta-xylanase
Products: NA
Alternate protein names: Endoglucanase; Cellobiohydrolase; Cellulase; Endo-1,4-beta-glucanase; Exoglucanase; 1,4-beta-cellobiohydrolase; Exocellobiohydrolase [H]
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MKSKQYILGVLTALLFASCSNDEKVVLKYADEGDSGNPNPITQTLKEKAKFKIGAAVKMKDLQNEANYKNAVLKHYNQIT AEFEMKMASIWTSSTAYNYTAADYLVGFAQDNKMEVHGHTLVWYDSFPEWFKKAQYDSIAFEAKVKVYITDVVGRYKGKV KSWDVVNEVFADGGAMRNETVINSLFKDPIGFYGRCFRYAKAADPDAKLFYNDYSVVLDAGKRASIKKMVARFKANGVPI DGLGDQFHYATDTNRQTMKTGFTDLASTGLLIHISELDIKVNTGKSDSYVFNDVENQKQAETYKYITTMYEELPQTQKFA ISTWGVTDKYTWLTSFWHSKEYPLLLDADYNKKPAYQGFLDGLK
Sequences:
>Translated_364_residues MKSKQYILGVLTALLFASCSNDEKVVLKYADEGDSGNPNPITQTLKEKAKFKIGAAVKMKDLQNEANYKNAVLKHYNQIT AEFEMKMASIWTSSTAYNYTAADYLVGFAQDNKMEVHGHTLVWYDSFPEWFKKAQYDSIAFEAKVKVYITDVVGRYKGKV KSWDVVNEVFADGGAMRNETVINSLFKDPIGFYGRCFRYAKAADPDAKLFYNDYSVVLDAGKRASIKKMVARFKANGVPI DGLGDQFHYATDTNRQTMKTGFTDLASTGLLIHISELDIKVNTGKSDSYVFNDVENQKQAETYKYITTMYEELPQTQKFA ISTWGVTDKYTWLTSFWHSKEYPLLLDADYNKKPAYQGFLDGLK >Mature_364_residues MKSKQYILGVLTALLFASCSNDEKVVLKYADEGDSGNPNPITQTLKEKAKFKIGAAVKMKDLQNEANYKNAVLKHYNQIT AEFEMKMASIWTSSTAYNYTAADYLVGFAQDNKMEVHGHTLVWYDSFPEWFKKAQYDSIAFEAKVKVYITDVVGRYKGKV KSWDVVNEVFADGGAMRNETVINSLFKDPIGFYGRCFRYAKAADPDAKLFYNDYSVVLDAGKRASIKKMVARFKANGVPI DGLGDQFHYATDTNRQTMKTGFTDLASTGLLIHISELDIKVNTGKSDSYVFNDVENQKQAETYKYITTMYEELPQTQKFA ISTWGVTDKYTWLTSFWHSKEYPLLLDADYNKKPAYQGFLDGLK
Specific function: This protein is made up of two domains:the N-terminal domain has exoglucanase activity while the C-terminal domain is an endoglucanase [H]
COG id: COG3693
COG function: function code G; Beta-1,4-xylanase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CBM3 (carbohydrate binding type-3) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008965 - InterPro: IPR001956 - InterPro: IPR001000 - InterPro: IPR001547 - InterPro: IPR018087 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00942 CBM_3; PF00150 Cellulase; PF00331 Glyco_hydro_10 [H]
EC number: =3.2.1.4; =3.2.1.91 [H]
Molecular weight: Translated: 41334; Mature: 41334
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00591 GLYCOSYL_HYDROL_F10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKQYILGVLTALLFASCSNDEKVVLKYADEGDSGNPNPITQTLKEKAKFKIGAAVKMK CCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHEEECCEEEHH DLQNEANYKNAVLKHYNQITAEFEMKMASIWTSSTAYNYTAADYLVGFAQDNKMEVHGHT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHEEEECCCCEEEECCCE LVWYDSFPEWFKKAQYDSIAFEAKVKVYITDVVGRYKGKVKSWDVVNEVFADGGAMRNET EEEECCCHHHHHHCCCCCEEEEEEEEEEEEEHHHHHCCCCCCHHHHHHHHHCCCCCCHHH VINSLFKDPIGFYGRCFRYAKAADPDAKLFYNDYSVVLDAGKRASIKKMVARFKANGVPI HHHHHHHCHHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCHHHHHHHHHHHCCCCCC DGLGDQFHYATDTNRQTMKTGFTDLASTGLLIHISELDIKVNTGKSDSYVFNDVENQKQA CCCCCCEEEECCCCCHHHHHCCHHHHCCCEEEEEEEEEEEEECCCCCCEEECCCCCHHHH ETYKYITTMYEELPQTQKFAISTWGVTDKYTWLTSFWHSKEYPLLLDADYNKKPAYQGFL HHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCHHHHH DGLK CCCC >Mature Secondary Structure MKSKQYILGVLTALLFASCSNDEKVVLKYADEGDSGNPNPITQTLKEKAKFKIGAAVKMK CCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHEEECCEEEHH DLQNEANYKNAVLKHYNQITAEFEMKMASIWTSSTAYNYTAADYLVGFAQDNKMEVHGHT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHEEEECCCCEEEECCCE LVWYDSFPEWFKKAQYDSIAFEAKVKVYITDVVGRYKGKVKSWDVVNEVFADGGAMRNET EEEECCCHHHHHHCCCCCEEEEEEEEEEEEEHHHHHCCCCCCHHHHHHHHHCCCCCCHHH VINSLFKDPIGFYGRCFRYAKAADPDAKLFYNDYSVVLDAGKRASIKKMVARFKANGVPI HHHHHHHCHHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCHHHHHHHHHHHCCCCCC DGLGDQFHYATDTNRQTMKTGFTDLASTGLLIHISELDIKVNTGKSDSYVFNDVENQKQA CCCCCCEEEECCCCCHHHHHCCHHHHCCCEEEEEEEEEEEEECCCCCCEEECCCCCHHHH ETYKYITTMYEELPQTQKFAISTWGVTDKYTWLTSFWHSKEYPLLLDADYNKKPAYQGFL HHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCHHHHH DGLK CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2789517 [H]