Click here to switch to the map view.

The map label for this gene is 146299836

Identifier: 146299836

GI number: 146299836

Start: 2463548

End: 2465140

Strand: Direct

Name: 146299836

Synonym: Fjoh_2078

Alternate gene names: NA

Gene position: 2463548-2465140 (Clockwise)

Preceding gene: 146299835

Following gene: 146299837

Centisome position: 40.41

GC content: 37.41

Gene sequence:

>1593_bases
ATGAAAAATATAAATTTTCTATTTGTTTTGATATTCGGACTTTCTTTAGGACTTACTTCATGCGAAGATTTTCTGGAAGA
AAACGTAAAAGATCAGGTTTCTGTAGATTATATCTACAATTCTCCTGCAGGATTAGAAGTAGGAGTAAATGCACTTTACA
ACCAAATGCGTTTTTATAATCTGCCGTCTGGCGATAACAGCGATTTGTGGGCGAATGTTTTCTTTATGGTCGCAACTGAT
TTAGGATTGCACAGAACCTGGAATACACCTTACGGAACAGGACATAATCCGCAGTCATATACAGGCTCAAAATGGATTCA
GGGCTATAAAATTATTGATAGATGTTCGGCAATTATTACATCGGCAAGAACTATAAAAATGGATGAAAATGCCAAAAAAA
GATTAGTAGCGCAGGCACGCGTTATTAGAGGAGAATTGTATCTGGATTTAAAACAAATGTATGGAGGTATTTTAATTGAT
ACTATCCCAACAACTCCTCAAAACATCAATGATCCGGTAGAATATAAAGTAGCCAGCGATGCTGATGTATATCGATTAAT
CGATGCTGATTTAGACTATGCGATTGCCAATCTTCCTTTTAAAGTAGATCCGGGACGTTATGGTCAGGGAGTTGCGAGAC
ACATTCGCGGAAAAAGCGCATTATGGCAGGAAGACTGGACAGAAGCTGCAGCACAATTTGACGCCATTATTAACGACGGA
ACACATGGTTTAGTGGCTCTTGTTGATGTTTGGGGACAAAATGCCAATCATAAAGAATCTCTTTTTACTTATCAAAAAGA
CTTTTTATTAGGACCGGAAGATGGGTTAGCTGGCGGCGGCGGTTCGTGGTTAAGCAGCGTTTTTACACACAGAACTTACG
AATTAAACGCAAACGAACTAATTCAGGATGTGGCTTATGGAGGTCAGGCTTTAGGATGGTTTTATCCAAATAATTACTTG
AAATCACTTTACGATCAGGCAAACGATCTTCGATTCAAAACTTATTATTATTCAGATAATTATCAAGATTATAAAATCAA
TGTTCCGGGAAATCCAAAATTTGGACAGCCAATTACCAATCCGGCTATTGCTGCACCAAATGGAAATTACAGAGCATGGC
ATTGGAGTTTGAAAAAATACCATGATACAGAAAAACTGCCAATGACCTCAAACAGTTACAAAGATTATATGTATTACAGA
CTGGCAGAAACGTATCTGCTGGCATCAGAAGCACATCATAATTTAGGCAACGATACAAAAGCATTAGCATATTTAAACAA
AGTAAGAAGAAGAGGTTATACAGGAAATCCTGAAAGCACCGTAACCACTTTTGATTTGACTGCCTGGACTTTAAACAACT
ATTTAGACGAATCGGCAAGAGAATTAGCTTTTGAAAACAACAGATGGTTCTTGTTAAAAAGATTAGGGCTTTTGGTAGAA
AGACAAAATTTATATTTCCGTTCAAGCCCGTCTGGAACTATTTCGGGAGAAGTACCTTTAAAAATGACACCGGCAATGGT
AAACATGCCAATTCCGCAGAGCCAGATAGATTTAATGGGAAAACCAGAAGGATTTAATGTTGGATACAATTAA

Upstream 100 bases:

>100_bases
ATAAACGATTATCCGGAACCTGTTACTTGTGTTATAGGCTTACAAGTAGGTTTTTAATAACACAGTTTAAGACATTAAAT
AAAATAAAAATAACAAGATC

Downstream 100 bases:

>100_bases
TGATTTAACACATAGAAACATAGATTGAAAACTAATAAAAGAGTTTAAAAAGAGAAAATATTTTCTCTATGTTTCTATGT
GTTAGAAAAATATATAGAAT

Product: RagB/SusD domain-containing protein

Products: NA

Alternate protein names: RagB/SusD Domain-Containing Protein; Ragb/Susd Domain Protein; Outer Membrane Protein; SusD/RagB Family Protein

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MKNINFLFVLIFGLSLGLTSCEDFLEENVKDQVSVDYIYNSPAGLEVGVNALYNQMRFYNLPSGDNSDLWANVFFMVATD
LGLHRTWNTPYGTGHNPQSYTGSKWIQGYKIIDRCSAIITSARTIKMDENAKKRLVAQARVIRGELYLDLKQMYGGILID
TIPTTPQNINDPVEYKVASDADVYRLIDADLDYAIANLPFKVDPGRYGQGVARHIRGKSALWQEDWTEAAAQFDAIINDG
THGLVALVDVWGQNANHKESLFTYQKDFLLGPEDGLAGGGGSWLSSVFTHRTYELNANELIQDVAYGGQALGWFYPNNYL
KSLYDQANDLRFKTYYYSDNYQDYKINVPGNPKFGQPITNPAIAAPNGNYRAWHWSLKKYHDTEKLPMTSNSYKDYMYYR
LAETYLLASEAHHNLGNDTKALAYLNKVRRRGYTGNPESTVTTFDLTAWTLNNYLDESARELAFENNRWFLLKRLGLLVE
RQNLYFRSSPSGTISGEVPLKMTPAMVNMPIPQSQIDLMGKPEGFNVGYN

Sequences:

>Translated_530_residues
MKNINFLFVLIFGLSLGLTSCEDFLEENVKDQVSVDYIYNSPAGLEVGVNALYNQMRFYNLPSGDNSDLWANVFFMVATD
LGLHRTWNTPYGTGHNPQSYTGSKWIQGYKIIDRCSAIITSARTIKMDENAKKRLVAQARVIRGELYLDLKQMYGGILID
TIPTTPQNINDPVEYKVASDADVYRLIDADLDYAIANLPFKVDPGRYGQGVARHIRGKSALWQEDWTEAAAQFDAIINDG
THGLVALVDVWGQNANHKESLFTYQKDFLLGPEDGLAGGGGSWLSSVFTHRTYELNANELIQDVAYGGQALGWFYPNNYL
KSLYDQANDLRFKTYYYSDNYQDYKINVPGNPKFGQPITNPAIAAPNGNYRAWHWSLKKYHDTEKLPMTSNSYKDYMYYR
LAETYLLASEAHHNLGNDTKALAYLNKVRRRGYTGNPESTVTTFDLTAWTLNNYLDESARELAFENNRWFLLKRLGLLVE
RQNLYFRSSPSGTISGEVPLKMTPAMVNMPIPQSQIDLMGKPEGFNVGYN
>Mature_530_residues
MKNINFLFVLIFGLSLGLTSCEDFLEENVKDQVSVDYIYNSPAGLEVGVNALYNQMRFYNLPSGDNSDLWANVFFMVATD
LGLHRTWNTPYGTGHNPQSYTGSKWIQGYKIIDRCSAIITSARTIKMDENAKKRLVAQARVIRGELYLDLKQMYGGILID
TIPTTPQNINDPVEYKVASDADVYRLIDADLDYAIANLPFKVDPGRYGQGVARHIRGKSALWQEDWTEAAAQFDAIINDG
THGLVALVDVWGQNANHKESLFTYQKDFLLGPEDGLAGGGGSWLSSVFTHRTYELNANELIQDVAYGGQALGWFYPNNYL
KSLYDQANDLRFKTYYYSDNYQDYKINVPGNPKFGQPITNPAIAAPNGNYRAWHWSLKKYHDTEKLPMTSNSYKDYMYYR
LAETYLLASEAHHNLGNDTKALAYLNKVRRRGYTGNPESTVTTFDLTAWTLNNYLDESARELAFENNRWFLLKRLGLLVE
RQNLYFRSSPSGTISGEVPLKMTPAMVNMPIPQSQIDLMGKPEGFNVGYN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60055; Mature: 60055

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNINFLFVLIFGLSLGLTSCEDFLEENVKDQVSVDYIYNSPAGLEVGVNALYNQMRFYN
CCCCCEEHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHEEE
LPSGDNSDLWANVFFMVATDLGLHRTWNTPYGTGHNPQSYTGSKWIQGYKIIDRCSAIIT
CCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
SARTIKMDENAKKRLVAQARVIRGELYLDLKQMYGGILIDTIPTTPQNINDPVEYKVASD
CCEEEEECCCHHHHHHHHHHHHHHHHEEEHHHHCCCEEEECCCCCCCCCCCCCEEEECCC
ADVYRLIDADLDYAIANLPFKVDPGRYGQGVARHIRGKSALWQEDWTEAAAQFDAIINDG
CCEEEEECCCCCHHHHCCCEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
THGLVALVDVWGQNANHKESLFTYQKDFLLGPEDGLAGGGGSWLSSVFTHRTYELNANEL
CCCEEEEEEHHCCCCCCHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHCCEEECCHHHH
IQDVAYGGQALGWFYPNNYLKSLYDQANDLRFKTYYYSDNYQDYKINVPGNPKFGQPITN
HHHHHCCCCEEEEECCHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCC
PAIAAPNGNYRAWHWSLKKYHDTEKLPMTSNSYKDYMYYRLAETYLLASEAHHNLGNDTK
CEEECCCCCEEEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
ALAYLNKVRRRGYTGNPESTVTTFDLTAWTLNNYLDESARELAFENNRWFLLKRLGLLVE
HHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHEE
RQNLYFRSSPSGTISGEVPLKMTPAMVNMPIPQSQIDLMGKPEGFNVGYN
CCCEEEECCCCCCCCCCCCEEECCCEEECCCCHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKNINFLFVLIFGLSLGLTSCEDFLEENVKDQVSVDYIYNSPAGLEVGVNALYNQMRFYN
CCCCCEEHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHEEE
LPSGDNSDLWANVFFMVATDLGLHRTWNTPYGTGHNPQSYTGSKWIQGYKIIDRCSAIIT
CCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
SARTIKMDENAKKRLVAQARVIRGELYLDLKQMYGGILIDTIPTTPQNINDPVEYKVASD
CCEEEEECCCHHHHHHHHHHHHHHHHEEEHHHHCCCEEEECCCCCCCCCCCCCEEEECCC
ADVYRLIDADLDYAIANLPFKVDPGRYGQGVARHIRGKSALWQEDWTEAAAQFDAIINDG
CCEEEEECCCCCHHHHCCCEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
THGLVALVDVWGQNANHKESLFTYQKDFLLGPEDGLAGGGGSWLSSVFTHRTYELNANEL
CCCEEEEEEHHCCCCCCHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHCCEEECCHHHH
IQDVAYGGQALGWFYPNNYLKSLYDQANDLRFKTYYYSDNYQDYKINVPGNPKFGQPITN
HHHHHCCCCEEEEECCHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCC
PAIAAPNGNYRAWHWSLKKYHDTEKLPMTSNSYKDYMYYRLAETYLLASEAHHNLGNDTK
CEEECCCCCEEEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
ALAYLNKVRRRGYTGNPESTVTTFDLTAWTLNNYLDESARELAFENNRWFLLKRLGLLVE
HHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHEE
RQNLYFRSSPSGTISGEVPLKMTPAMVNMPIPQSQIDLMGKPEGFNVGYN
CCCEEEECCCCCCCCCCCCEEECCCEEECCCCHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA