Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is nahA [H]

Identifier: 146299798

GI number: 146299798

Start: 2397653

End: 2399971

Strand: Direct

Name: nahA [H]

Synonym: Fjoh_2039

Alternate gene names: 146299798

Gene position: 2397653-2399971 (Clockwise)

Preceding gene: 146299797

Following gene: 146299799

Centisome position: 39.33

GC content: 35.75

Gene sequence:

>2319_bases
ATGAGAATTATAAAATCTTATTTGATAATCGGTTTTCTTGCTCTTGTAACTTCTTCGTATGCACAGAAAGTTTTCACAGA
GAAAGACATTCGTATCATTCCAAAACCAACTCAGACTCTAATAAAAACCGGTGTTTTTGAATTTAATAAAGATACAAAGT
TTGTTACCGGAAATGATTTCCAAAAAGACGCTGCGAATGCTTTGGCTTCTAAATTAGCCATTGCAGCAGGATGGAAACCA
GAAACAACAACAAAAGCTCCGGCAAGTAATTTTGTTCAGTTTAAAACAGATCCAAACTTAAAAAATGAAGCTTATATTTT
AGACGTAAATCCAAATAGTATTGTTATTTCGGCTAAAGGAAATACAGGTTTTTTATACGGTCTGGAAAGCATCAGACAAT
TACTTCCTGAAGCAATCGAAAGCCAATATGCCGTAACATCTGCAAAATGGCAGATTCCAAGTTTAACGATAAATGATGAA
CCTCGATTTAAATGGAGAGGTTTAATGCTGGATTTATCACGTCATTTCTTCGATAAAAATTATATTCTGACTACAATTGA
TCGTTTGGCAATGCACAAAATGAATGTTTTGCATTTGCATTTAGTAGACGATCAGGGCTGGAGAATCGAAATTAAAAAAT
ATCCAAAACTAACAGAAGTCGGAGCCTGGAGAGTTGATCAGGAAAACTTGTCTTGGAACGCCAGACTTGCTGTAAGTGCA
GATCAAAAAGGAACTTACGGGGGATTTTTTACGCAGGACGAATTAAGAGAAATTGTAAAATATGCTGCAACAAAAGGCAT
CGAAGTAATTCCTGAAATCGAAATGCCTGCTCACGTAAGCAGTGCCATTGCATCATATCCTGAACTGGCTTGTTTTGATC
AGAAAATTGGAGTTCCTTCTGGCGGAGTTTGGCCTTTAACAGATATTTATTGTGCAGGAAAAGAAACTACGTTTGAGTTT
TTACAAAATGTAATCGATGAAGTAATTACCATTTTCCCTTCAAAATATATTCATATTGGAGGAGATGAAGCGACTAAAAC
CAATTGGGCAAAATGTCCGCACTGCCAAAAAAGAATTAAAGATGAACACTTAAAAAGTGTAGACGAATTACAAAGTTATT
TTGTAAAACGTATGGAAAAATACATCAATTCTAAAGGCAAAAAAGTAATTGGCTGGGATGAAATTTTAGAAGGAGGTCTG
GCTCCGGATGCAACAGTAATGAGCTGGAGAGGAACAAAAGGCGGAATTGAAGCGGCAGATCAGGGACACGATGTTATTAT
GACTCCTGAAACACCTTGTTATTTCAACTTTTATCAAGGTCCGCAAAACGAAGAACCTTTAGCTTTTGATGCTTATAACC
CGTTAAATGAAGTTTACAAATTTGATCCTGTAGTGCCGACTATGACTCCTCAGGAAGCTGGACACGTTTTAGGCGGACAG
GCAAATTTATGGGCAGAACATATTTCTGGGCCAAAAGATTCTGAGTATATGATTTTTCCAAGATTAGCCGCGTTATCAGA
AACATTATGGAGTCCGAAAGAAAAGCGTAATTGGAATGATTTTACAACAAGATTATTCTCAATGTTCAAGCGTTATGATT
ATCAAGGATTAAATTATGCAAAAAGCGCTTATTTGGTAACCGCTTCTTCTACTGCAGATTTAGCTAACAAACAAGTGAAA
GTGGAATTAAAGAATGAATTTCCAAATCCGGATATCCGTTATGTTTTAGGAGATAAAAATATAGATCATCACGCTGTAAA
ATATACAAGTCCAATTGAGTTTAAAGAAACAACTGTTTTAAAAGCTTCTTTGTTTCAGGATGAAAAACCAGTTGGAAAAA
CATTCACAGACACGATTATTTTCCATAAAGCTGTTGCACACAAAGTTAAGTACTTAACGCCTTTTAATCAAAGTTACAAA
GGAGATGCCAATACGATGGTTAATACAATTAGAGGAAGTAAAAATTTCCATGACGGACAATGGCAGGCTTGGCTTGTAAA
CGATATGGAGCTGGTAATTGATTTCGAAAAACAGGAAAGTATCGAGCAGGTAATCGTAGGAACTTTAGAAAGTCAGGGCG
CTGGAGTTAATTTTCCAATCGAAGTAAAAGTACTGGTTTCTAATGACGGAATTAAATACAAGCAAGTTGGAAAAATAACA
CGTCCGTATGCAGTAAATGCTGTTCCTGAACTGAAAGATTTTAAAATCAATTTTCAGAAACAAAACGCACGCTTTGTTAA
AGTGATTGCAGGCAACTTAAAGAAAAGTCCTAAAGGAGAAAGCTCTTGGTTATTCGTAGATGAAATTCTAGTAAACTAA

Upstream 100 bases:

>100_bases
TAGACAGCTGGCAGGCATGGCCAATGGAAAAATATCTTTTGAGAGGAAAAAATTATCAGTATCAATTTAAAATAACACCA
TCATTAAAATAATTTAGAAT

Downstream 100 bases:

>100_bases
TTTTCTAACATATAGAAACATAGATTTATTTCTTGAATGAATAAAAAAGGTATAAAAAAAAACTAGTTTCTAACACATAT
TTCTATGTGTGTTAATGCAA

Product: beta-N-acetylhexosaminidase

Products: NA

Alternate protein names: Beta-GlcNAcase; Beta-N-acetylhexosaminidase; Beta-NAHase; N-acetyl-beta-glucosaminidase [H]

Number of amino acids: Translated: 772; Mature: 772

Protein sequence:

>772_residues
MRIIKSYLIIGFLALVTSSYAQKVFTEKDIRIIPKPTQTLIKTGVFEFNKDTKFVTGNDFQKDAANALASKLAIAAGWKP
ETTTKAPASNFVQFKTDPNLKNEAYILDVNPNSIVISAKGNTGFLYGLESIRQLLPEAIESQYAVTSAKWQIPSLTINDE
PRFKWRGLMLDLSRHFFDKNYILTTIDRLAMHKMNVLHLHLVDDQGWRIEIKKYPKLTEVGAWRVDQENLSWNARLAVSA
DQKGTYGGFFTQDELREIVKYAATKGIEVIPEIEMPAHVSSAIASYPELACFDQKIGVPSGGVWPLTDIYCAGKETTFEF
LQNVIDEVITIFPSKYIHIGGDEATKTNWAKCPHCQKRIKDEHLKSVDELQSYFVKRMEKYINSKGKKVIGWDEILEGGL
APDATVMSWRGTKGGIEAADQGHDVIMTPETPCYFNFYQGPQNEEPLAFDAYNPLNEVYKFDPVVPTMTPQEAGHVLGGQ
ANLWAEHISGPKDSEYMIFPRLAALSETLWSPKEKRNWNDFTTRLFSMFKRYDYQGLNYAKSAYLVTASSTADLANKQVK
VELKNEFPNPDIRYVLGDKNIDHHAVKYTSPIEFKETTVLKASLFQDEKPVGKTFTDTIIFHKAVAHKVKYLTPFNQSYK
GDANTMVNTIRGSKNFHDGQWQAWLVNDMELVIDFEKQESIEQVIVGTLESQGAGVNFPIEVKVLVSNDGIKYKQVGKIT
RPYAVNAVPELKDFKINFQKQNARFVKVIAGNLKKSPKGESSWLFVDEILVN

Sequences:

>Translated_772_residues
MRIIKSYLIIGFLALVTSSYAQKVFTEKDIRIIPKPTQTLIKTGVFEFNKDTKFVTGNDFQKDAANALASKLAIAAGWKP
ETTTKAPASNFVQFKTDPNLKNEAYILDVNPNSIVISAKGNTGFLYGLESIRQLLPEAIESQYAVTSAKWQIPSLTINDE
PRFKWRGLMLDLSRHFFDKNYILTTIDRLAMHKMNVLHLHLVDDQGWRIEIKKYPKLTEVGAWRVDQENLSWNARLAVSA
DQKGTYGGFFTQDELREIVKYAATKGIEVIPEIEMPAHVSSAIASYPELACFDQKIGVPSGGVWPLTDIYCAGKETTFEF
LQNVIDEVITIFPSKYIHIGGDEATKTNWAKCPHCQKRIKDEHLKSVDELQSYFVKRMEKYINSKGKKVIGWDEILEGGL
APDATVMSWRGTKGGIEAADQGHDVIMTPETPCYFNFYQGPQNEEPLAFDAYNPLNEVYKFDPVVPTMTPQEAGHVLGGQ
ANLWAEHISGPKDSEYMIFPRLAALSETLWSPKEKRNWNDFTTRLFSMFKRYDYQGLNYAKSAYLVTASSTADLANKQVK
VELKNEFPNPDIRYVLGDKNIDHHAVKYTSPIEFKETTVLKASLFQDEKPVGKTFTDTIIFHKAVAHKVKYLTPFNQSYK
GDANTMVNTIRGSKNFHDGQWQAWLVNDMELVIDFEKQESIEQVIVGTLESQGAGVNFPIEVKVLVSNDGIKYKQVGKIT
RPYAVNAVPELKDFKINFQKQNARFVKVIAGNLKKSPKGESSWLFVDEILVN
>Mature_772_residues
MRIIKSYLIIGFLALVTSSYAQKVFTEKDIRIIPKPTQTLIKTGVFEFNKDTKFVTGNDFQKDAANALASKLAIAAGWKP
ETTTKAPASNFVQFKTDPNLKNEAYILDVNPNSIVISAKGNTGFLYGLESIRQLLPEAIESQYAVTSAKWQIPSLTINDE
PRFKWRGLMLDLSRHFFDKNYILTTIDRLAMHKMNVLHLHLVDDQGWRIEIKKYPKLTEVGAWRVDQENLSWNARLAVSA
DQKGTYGGFFTQDELREIVKYAATKGIEVIPEIEMPAHVSSAIASYPELACFDQKIGVPSGGVWPLTDIYCAGKETTFEF
LQNVIDEVITIFPSKYIHIGGDEATKTNWAKCPHCQKRIKDEHLKSVDELQSYFVKRMEKYINSKGKKVIGWDEILEGGL
APDATVMSWRGTKGGIEAADQGHDVIMTPETPCYFNFYQGPQNEEPLAFDAYNPLNEVYKFDPVVPTMTPQEAGHVLGGQ
ANLWAEHISGPKDSEYMIFPRLAALSETLWSPKEKRNWNDFTTRLFSMFKRYDYQGLNYAKSAYLVTASSTADLANKQVK
VELKNEFPNPDIRYVLGDKNIDHHAVKYTSPIEFKETTVLKASLFQDEKPVGKTFTDTIIFHKAVAHKVKYLTPFNQSYK
GDANTMVNTIRGSKNFHDGQWQAWLVNDMELVIDFEKQESIEQVIVGTLESQGAGVNFPIEVKVLVSNDGIKYKQVGKIT
RPYAVNAVPELKDFKINFQKQNARFVKVIAGNLKKSPKGESSWLFVDEILVN

Specific function: Unknown

COG id: COG3525

COG function: function code G; N-acetyl-beta-hexosaminidase

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 20 family [H]

Homologues:

Organism=Homo sapiens, GI4504373, Length=437, Percent_Identity=27.6887871853547, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI189181666, Length=434, Percent_Identity=27.4193548387097, Blast_Score=164, Evalue=4e-40,
Organism=Caenorhabditis elegans, GI17569815, Length=429, Percent_Identity=28.4382284382284, Blast_Score=155, Evalue=1e-37,
Organism=Drosophila melanogaster, GI281365639, Length=469, Percent_Identity=24.9466950959488, Blast_Score=131, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24657474, Length=469, Percent_Identity=24.9466950959488, Blast_Score=131, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24657468, Length=469, Percent_Identity=24.9466950959488, Blast_Score=131, Evalue=2e-30,
Organism=Drosophila melanogaster, GI17647501, Length=469, Percent_Identity=24.9466950959488, Blast_Score=131, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24653074, Length=421, Percent_Identity=27.0783847980998, Blast_Score=118, Evalue=2e-26,
Organism=Drosophila melanogaster, GI45551090, Length=421, Percent_Identity=27.0783847980998, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI17933586, Length=457, Percent_Identity=22.1006564551422, Blast_Score=97, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015882
- InterPro:   IPR001540
- InterPro:   IPR015883
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR011658 [H]

Pfam domain/function: PF00728 Glyco_hydro_20; PF02838 Glyco_hydro_20b [H]

EC number: =3.2.1.52 [H]

Molecular weight: Translated: 87327; Mature: 87327

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIIKSYLIIGFLALVTSSYAQKVFTEKDIRIIPKPTQTLIKTGVFEFNKDTKFVTGNDF
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHCCEEECCCCEEEECCCC
QKDAANALASKLAIAAGWKPETTTKAPASNFVQFKTDPNLKNEAYILDVNPNSIVISAKG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCEEEEEECC
NTGFLYGLESIRQLLPEAIESQYAVTSAKWQIPSLTINDEPRFKWRGLMLDLSRHFFDKN
CCEEEECHHHHHHHHHHHHHCCCEEEECCEECCEEEECCCCCEEEEHHHHHHHHHHCCCC
YILTTIDRLAMHKMNVLHLHLVDDQGWRIEIKKYPKLTEVGAWRVDQENLSWNARLAVSA
HHHHHHHHHHHHHCCEEEEEEECCCCCEEEEECCCCCHHCCCEEECCCCCCEEEEEEEEC
DQKGTYGGFFTQDELREIVKYAATKGIEVIPEIEMPAHVSSAIASYPELACFDQKIGVPS
CCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCHHHHHHHCCCCC
GGVWPLTDIYCAGKETTFEFLQNVIDEVITIFPSKYIHIGGDEATKTNWAKCPHCQKRIK
CCCCCCHHEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHH
DEHLKSVDELQSYFVKRMEKYINSKGKKVIGWDEILEGGLAPDATVMSWRGTKGGIEAAD
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHCCCCCCCCEEEEECCCCCCCCCCC
QGHDVIMTPETPCYFNFYQGPQNEEPLAFDAYNPLNEVYKFDPVVPTMTPQEAGHVLGGQ
CCCEEEECCCCCEEEEECCCCCCCCCEEEECCCCHHHHHCCCCCCCCCCHHHCCCCCCCC
ANLWAEHISGPKDSEYMIFPRLAALSETLWSPKEKRNWNDFTTRLFSMFKRYDYQGLNYA
HHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHCCCCCCCCC
KSAYLVTASSTADLANKQVKVELKNEFPNPDIRYVLGDKNIDHHAVKYTSPIEFKETTVL
CCEEEEEECCCHHHCCCEEEEEECCCCCCCCEEEEECCCCCCCCEEEECCCCCCCHHHEE
KASLFQDEKPVGKTFTDTIIFHKAVAHKVKYLTPFNQSYKGDANTMVNTIRGSKNFHDGQ
EHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHCCCCCCCCCC
WQAWLVNDMELVIDFEKQESIEQVIVGTLESQGAGVNFPIEVKVLVSNDGIKYKQVGKIT
EEEEEECCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHCCCC
RPYAVNAVPELKDFKINFQKQNARFVKVIAGNLKKSPKGESSWLFVDEILVN
CCEEECCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEHHHHHCC
>Mature Secondary Structure
MRIIKSYLIIGFLALVTSSYAQKVFTEKDIRIIPKPTQTLIKTGVFEFNKDTKFVTGNDF
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHCCEEECCCCEEEECCCC
QKDAANALASKLAIAAGWKPETTTKAPASNFVQFKTDPNLKNEAYILDVNPNSIVISAKG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCEEEEEECC
NTGFLYGLESIRQLLPEAIESQYAVTSAKWQIPSLTINDEPRFKWRGLMLDLSRHFFDKN
CCEEEECHHHHHHHHHHHHHCCCEEEECCEECCEEEECCCCCEEEEHHHHHHHHHHCCCC
YILTTIDRLAMHKMNVLHLHLVDDQGWRIEIKKYPKLTEVGAWRVDQENLSWNARLAVSA
HHHHHHHHHHHHHCCEEEEEEECCCCCEEEEECCCCCHHCCCEEECCCCCCEEEEEEEEC
DQKGTYGGFFTQDELREIVKYAATKGIEVIPEIEMPAHVSSAIASYPELACFDQKIGVPS
CCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCHHHHHHHCCCCC
GGVWPLTDIYCAGKETTFEFLQNVIDEVITIFPSKYIHIGGDEATKTNWAKCPHCQKRIK
CCCCCCHHEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHH
DEHLKSVDELQSYFVKRMEKYINSKGKKVIGWDEILEGGLAPDATVMSWRGTKGGIEAAD
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHCCCCCCCCEEEEECCCCCCCCCCC
QGHDVIMTPETPCYFNFYQGPQNEEPLAFDAYNPLNEVYKFDPVVPTMTPQEAGHVLGGQ
CCCEEEECCCCCEEEEECCCCCCCCCEEEECCCCHHHHHCCCCCCCCCCHHHCCCCCCCC
ANLWAEHISGPKDSEYMIFPRLAALSETLWSPKEKRNWNDFTTRLFSMFKRYDYQGLNYA
HHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHCCCCCCCCC
KSAYLVTASSTADLANKQVKVELKNEFPNPDIRYVLGDKNIDHHAVKYTSPIEFKETTVL
CCEEEEEECCCHHHCCCEEEEEECCCCCCCCEEEEECCCCCCCCEEEECCCCCCCHHHEE
KASLFQDEKPVGKTFTDTIIFHKAVAHKVKYLTPFNQSYKGDANTMVNTIRGSKNFHDGQ
EHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHCCCCCCCCCC
WQAWLVNDMELVIDFEKQESIEQVIVGTLESQGAGVNFPIEVKVLVSNDGIKYKQVGKIT
EEEEEECCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHCCCC
RPYAVNAVPELKDFKINFQKQNARFVKVIAGNLKKSPKGESSWLFVDEILVN
CCEEECCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7881557; 12949112 [H]