| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is resA [H]
Identifier: 146299771
GI number: 146299771
Start: 2349575
End: 2350711
Strand: Direct
Name: resA [H]
Synonym: Fjoh_2011
Alternate gene names: 146299771
Gene position: 2349575-2350711 (Clockwise)
Preceding gene: 146299770
Following gene: 146299772
Centisome position: 38.54
GC content: 33.6
Gene sequence:
>1137_bases ATGAAAAGTACAATCTTAAAATCGTCATTAATTGTATTGGCACTTGCATCTGTAACTACTTCTTGCTCTAAAAAAGAAGG TTACACAATCAACGGTACTATTGCCGGATTAGATAAAGGAATGGTTTATCTTGAAAACACAGATGAAAAAGGAAATAAAC AAATAGCAGATTCTGCACAAATTAAAGAAGGAGGAACTTTTACTTTTGAAGGAAAAGTTTCAGAACCTTTACTATATACT CTTAAATTAAAAGGAGAAGATTATGGAGCTTTCTTTCTTTTAGAGAACGAAGACATTAAAATTGAAGCTAAAAAAGATTC TATTTTTAAAGCTAAAATCAGTGGAGCGCGGCAAAATGATATTTACAAATCATACTACGATAACGAATTCAAAAAAATCC AGAATATCGCTGGTCCTGTTTATAAATTATCTGACTCCTTAACTCAAAACGGAAAAGTAAAATTAACAGCTGAACAGCAA ACCATGATGGATAAAAAATGGAAAGATCTTGCCGCTTTTGCTGATGATTTAACCGATAAATACATCCGAAAAAATAAAGA TAAAGTAGGTGCTGCTTTAATAATCAATGACCGAATTGTATCGTATGGAACTCCGGAACAGGTAAAAATGTATTATGCCG TTTTATCTCCAGACGTACAAAAATCAATTTACGGAAAACAGTTAAAAGAAGCCATCGACCTTAACGAAAAAACAGCAGTA GGCGTTACAGCTCCAGAGTTTTCTCAAACCGATATTGACGGAAAAGTAGTGAATCTTTCAGATTACAAAGGAAAATATGT TTTAGTTGATTTTTGGGCTTCTTGGTGCGGACCATGCCGAAAAGAAAATCCAAACGTAGTTTTAGCTTATAAAACCTATC ACGAAAAAGGATTTGATGTTTTGGGAGTTTCTTTAGATGATAAAAAGAACCTTTGGCAGAAAGCAATCGAAAAAGACGGT TTAACCTGGACTCATGTTTCTGATTTAAAAGGATGGCAGAACGAAGCTGCTGTTTTATACGGAGTAAAAATGGTGCCAAC GAATTACTTAATTGGTCCAGACGGAAAAATCGTTGCTAAAAACCTTAGAGAAGCAGAATTACAATCTAAACTAAAAGAAA TCTTCAGCAAATCGTAA
Upstream 100 bases:
>100_bases TTAATTTTAAGTTTATAGCCGCAGTTTACAGTCTCAATCAACACTGTAACTGAAAACTGGGACTGAAAACTGAGACAAAA AAACTAAAAAAATAACTCAC
Downstream 100 bases:
>100_bases ATTAGTATTCAGTCGCAGTTTTCAGTCGCAGTCTCAGTTTGGTTTAATCTGTTCAGTCGATAACTGAAAACTGCGACTGC GACTGAAAACTCAAGAAAAA
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: Acceptor; H2O; oxidized thioredoxin [C]
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MKSTILKSSLIVLALASVTTSCSKKEGYTINGTIAGLDKGMVYLENTDEKGNKQIADSAQIKEGGTFTFEGKVSEPLLYT LKLKGEDYGAFFLLENEDIKIEAKKDSIFKAKISGARQNDIYKSYYDNEFKKIQNIAGPVYKLSDSLTQNGKVKLTAEQQ TMMDKKWKDLAAFADDLTDKYIRKNKDKVGAALIINDRIVSYGTPEQVKMYYAVLSPDVQKSIYGKQLKEAIDLNEKTAV GVTAPEFSQTDIDGKVVNLSDYKGKYVLVDFWASWCGPCRKENPNVVLAYKTYHEKGFDVLGVSLDDKKNLWQKAIEKDG LTWTHVSDLKGWQNEAAVLYGVKMVPTNYLIGPDGKIVAKNLREAELQSKLKEIFSKS
Sequences:
>Translated_378_residues MKSTILKSSLIVLALASVTTSCSKKEGYTINGTIAGLDKGMVYLENTDEKGNKQIADSAQIKEGGTFTFEGKVSEPLLYT LKLKGEDYGAFFLLENEDIKIEAKKDSIFKAKISGARQNDIYKSYYDNEFKKIQNIAGPVYKLSDSLTQNGKVKLTAEQQ TMMDKKWKDLAAFADDLTDKYIRKNKDKVGAALIINDRIVSYGTPEQVKMYYAVLSPDVQKSIYGKQLKEAIDLNEKTAV GVTAPEFSQTDIDGKVVNLSDYKGKYVLVDFWASWCGPCRKENPNVVLAYKTYHEKGFDVLGVSLDDKKNLWQKAIEKDG LTWTHVSDLKGWQNEAAVLYGVKMVPTNYLIGPDGKIVAKNLREAELQSKLKEIFSKS >Mature_378_residues MKSTILKSSLIVLALASVTTSCSKKEGYTINGTIAGLDKGMVYLENTDEKGNKQIADSAQIKEGGTFTFEGKVSEPLLYT LKLKGEDYGAFFLLENEDIKIEAKKDSIFKAKISGARQNDIYKSYYDNEFKKIQNIAGPVYKLSDSLTQNGKVKLTAEQQ TMMDKKWKDLAAFADDLTDKYIRKNKDKVGAALIINDRIVSYGTPEQVKMYYAVLSPDVQKSIYGKQLKEAIDLNEKTAV GVTAPEFSQTDIDGKVVNLSDYKGKYVLVDFWASWCGPCRKENPNVVLAYKTYHEKGFDVLGVSLDDKKNLWQKAIEKDG LTWTHVSDLKGWQNEAAVLYGVKMVPTNYLIGPDGKIVAKNLREAELQSKLKEIFSKS
Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 42271; Mature: 42271
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSTILKSSLIVLALASVTTSCSKKEGYTINGTIAGLDKGMVYLENTDEKGNKQIADSAQ CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCC IKEGGTFTFEGKVSEPLLYTLKLKGEDYGAFFLLENEDIKIEAKKDSIFKAKISGARQND CCCCCEEEECCCCCCCEEEEEEECCCCCEEEEEEECCCEEEEECCCCEEEEEECCCCCCC IYKSYYDNEFKKIQNIAGPVYKLSDSLTQNGKVKLTAEQQTMMDKKWKDLAAFADDLTDK HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH YIRKNKDKVGAALIINDRIVSYGTPEQVKMYYAVLSPDVQKSIYGKQLKEAIDLNEKTAV HHHCCCCCCCEEEEEECEEEECCCCHHHEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEE GVTAPEFSQTDIDGKVVNLSDYKGKYVLVDFWASWCGPCRKENPNVVLAYKTYHEKGFDV EEECCCCCCCCCCCEEEEECCCCCCEEEEEEHHHHCCCCCCCCCCEEEEEEEECCCCCEE LGVSLDDKKNLWQKAIEKDGLTWTHVSDLKGWQNEAAVLYGVKMVPTNYLIGPDGKIVAK EEEEECCHHHHHHHHHHHCCCEEEEHHHCCCCCCCCEEEEEEEECCCCEEECCCCCEEHH NLREAELQSKLKEIFSKS HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKSTILKSSLIVLALASVTTSCSKKEGYTINGTIAGLDKGMVYLENTDEKGNKQIADSAQ CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCC IKEGGTFTFEGKVSEPLLYTLKLKGEDYGAFFLLENEDIKIEAKKDSIFKAKISGARQND CCCCCEEEECCCCCCCEEEEEEECCCCCEEEEEEECCCEEEEECCCCEEEEEECCCCCCC IYKSYYDNEFKKIQNIAGPVYKLSDSLTQNGKVKLTAEQQTMMDKKWKDLAAFADDLTDK HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH YIRKNKDKVGAALIINDRIVSYGTPEQVKMYYAVLSPDVQKSIYGKQLKEAIDLNEKTAV HHHCCCCCCCEEEEEECEEEECCCCHHHEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEE GVTAPEFSQTDIDGKVVNLSDYKGKYVLVDFWASWCGPCRKENPNVVLAYKTYHEKGFDV EEECCCCCCCCCCCEEEEECCCCCCEEEEEEHHHHCCCCCCCCCCEEEEEEEECCCCCEE LGVSLDDKKNLWQKAIEKDGLTWTHVSDLKGWQNEAAVLYGVKMVPTNYLIGPDGKIVAK EEEEECCHHHHHHHHHHHCCCEEEEHHHCCCCCCCCEEEEEEEECCCCEEECCCCCEEHH NLREAELQSKLKEIFSKS HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: reduced acceptor; H2O2; reduced thioredoxin [C]
Specific reaction: reduced acceptor + H2O2 = Acceptor + H2O reduced thioredoxin + H2O2 = oxidized thioredoxin + H2O [C]
General reaction: Oxidoreductases; Acting on a peroxide as acceptor; Peroxidase [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA