Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is resA [H]

Identifier: 146299770

GI number: 146299770

Start: 2348279

End: 2349478

Strand: Direct

Name: resA [H]

Synonym: Fjoh_2010

Alternate gene names: 146299770

Gene position: 2348279-2349478 (Clockwise)

Preceding gene: 146299769

Following gene: 146299771

Centisome position: 38.52

GC content: 32.33

Gene sequence:

>1200_bases
ATGAATACAATTAAATATAAAATAACAGCTTTGTGCATCTGTTTGTTTATGGTTTCAAACACTCAGGCACAAAAGAAAAA
AACAGCTGCTCCGGTGGCGGCATCTTATACAATTGAAGGAAACGTTACAGGTCTTGAAGAAGGAACAACTGTAAAATTAA
TTCCGGGTGGTACACATTCATCAGAATTACCGGTTGCAGAAACTACGCTGAAAGATGGTAAATTTACCTTTACAGGAAAA
TTAAAAGAACCGAGATATTTCTATATATCGTTTGGAAAAAATAAAGGAATTATTCCGGTAATGGCAGAAAATTCTAAAAT
AAAAATTACTGCTTCGGGCAGTGTTTCAAATGATGAAGGACAGTATATTAAATTTAAAGACATAGCAGTTACAGGTTCTA
AATCACATGATTTTTACACAAAAGAAACGGCTTTTAAAGCAGAGTTAGATAAAGATTATGCTGCTTATCATGTTGGAATA
GATGAATTGAGCAATAAAGTAGGCAAAGCCAGAAAAGAAGGAAATAAAAAAGCTTTAGACTCTCTTTATGGCACTGAACA
ATGGAAAGTTTTTGAAGCAAAAGAAAAAGCATTTTTTACCAAAGTAGAAAAAACAACATTAGATCTTATTGCAAAACATA
AAGAAACCTGGTGGGGACCGTTTTTTATGATGACAAATTACAGTTATTTTACACCCGAACAAAAACCATTGTACGATCAG
TTTTCTGAAACAGCAAAGAAAAGTTACTACGGGCAAATTTTAGATAAAGATTTAAATCCGAAATCATTAATTGGAACCAG
CATTGCTAATTTCAGTTTAAAAGACAAAGACGGAAAACCATATGCTGCAAAAGATATTACAGCAGGGAAAAAATACATTT
TGGTTGATTTTTGGGCTTCTTGGTGCGGACCATGCCGAAAAGAAATTCCAAACCTAAAAACAGCCTATTCAGAATATTCT
GGAAAAGGATTTGAAATTTTAAGTATTTCAATTGACAAAGATGAAAAAGCCTGGCAGAAAGCATTAGGACAAGAAAATAT
GCAATGGCATAATCTTTTAGATGATGACAAAGTAAGCAAATCATTTAACGTAAAAGCAATTCCGGCAACCTATTTAGTTG
ATAGTAAAGGTGTAATTATCAGCGATAATTTAAGAGGTGCAGAATTAGAAGCAAAATTAAAAGAACTATTAAAATCTTAA

Upstream 100 bases:

>100_bases
GAAACGGAACATTAACACAAAACGTAGATAAATAATAACTCAAAAGCTTCCTGATTAGGAACTCCAAAAGGGAAGCTTTT
CTATAAAACATCGATCAAAA

Downstream 100 bases:

>100_bases
TTTTAAGTTTATAGCCGCAGTTTACAGTCTCAATCAACACTGTAACTGAAAACTGGGACTGAAAACTGAGACAAAAAAAC
TAAAAAAATAACTCACATGA

Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MNTIKYKITALCICLFMVSNTQAQKKKTAAPVAASYTIEGNVTGLEEGTTVKLIPGGTHSSELPVAETTLKDGKFTFTGK
LKEPRYFYISFGKNKGIIPVMAENSKIKITASGSVSNDEGQYIKFKDIAVTGSKSHDFYTKETAFKAELDKDYAAYHVGI
DELSNKVGKARKEGNKKALDSLYGTEQWKVFEAKEKAFFTKVEKTTLDLIAKHKETWWGPFFMMTNYSYFTPEQKPLYDQ
FSETAKKSYYGQILDKDLNPKSLIGTSIANFSLKDKDGKPYAAKDITAGKKYILVDFWASWCGPCRKEIPNLKTAYSEYS
GKGFEILSISIDKDEKAWQKALGQENMQWHNLLDDDKVSKSFNVKAIPATYLVDSKGVIISDNLRGAELEAKLKELLKS

Sequences:

>Translated_399_residues
MNTIKYKITALCICLFMVSNTQAQKKKTAAPVAASYTIEGNVTGLEEGTTVKLIPGGTHSSELPVAETTLKDGKFTFTGK
LKEPRYFYISFGKNKGIIPVMAENSKIKITASGSVSNDEGQYIKFKDIAVTGSKSHDFYTKETAFKAELDKDYAAYHVGI
DELSNKVGKARKEGNKKALDSLYGTEQWKVFEAKEKAFFTKVEKTTLDLIAKHKETWWGPFFMMTNYSYFTPEQKPLYDQ
FSETAKKSYYGQILDKDLNPKSLIGTSIANFSLKDKDGKPYAAKDITAGKKYILVDFWASWCGPCRKEIPNLKTAYSEYS
GKGFEILSISIDKDEKAWQKALGQENMQWHNLLDDDKVSKSFNVKAIPATYLVDSKGVIISDNLRGAELEAKLKELLKS
>Mature_399_residues
MNTIKYKITALCICLFMVSNTQAQKKKTAAPVAASYTIEGNVTGLEEGTTVKLIPGGTHSSELPVAETTLKDGKFTFTGK
LKEPRYFYISFGKNKGIIPVMAENSKIKITASGSVSNDEGQYIKFKDIAVTGSKSHDFYTKETAFKAELDKDYAAYHVGI
DELSNKVGKARKEGNKKALDSLYGTEQWKVFEAKEKAFFTKVEKTTLDLIAKHKETWWGPFFMMTNYSYFTPEQKPLYDQ
FSETAKKSYYGQILDKDLNPKSLIGTSIANFSLKDKDGKPYAAKDITAGKKYILVDFWASWCGPCRKEIPNLKTAYSEYS
GKGFEILSISIDKDEKAWQKALGQENMQWHNLLDDDKVSKSFNVKAIPATYLVDSKGVIISDNLRGAELEAKLKELLKS

Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: NA

Molecular weight: Translated: 44703; Mature: 44703

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTIKYKITALCICLFMVSNTQAQKKKTAAPVAASYTIEGNVTGLEEGTTVKLIPGGTHS
CCCEEHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEEECCEEECCCCCEEEEEECCCCC
SELPVAETTLKDGKFTFTGKLKEPRYFYISFGKNKGIIPVMAENSKIKITASGSVSNDEG
CCCCCHHHCCCCCEEEEEEECCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCC
QYIKFKDIAVTGSKSHDFYTKETAFKAELDKDYAAYHVGIDELSNKVGKARKEGNKKALD
CEEEEEEEEEECCCCCCCEECCHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCHHHHH
SLYGTEQWKVFEAKEKAFFTKVEKTTLDLIAKHKETWWGPFFMMTNYSYFTPEQKPLYDQ
HHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCHHHH
FSETAKKSYYGQILDKDLNPKSLIGTSIANFSLKDKDGKPYAAKDITAGKKYILVDFWAS
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCEECCCCCCCCEEEEEEEHHH
WCGPCRKEIPNLKTAYSEYSGKGFEILSISIDKDEKAWQKALGQENMQWHNLLDDDKVSK
HCCHHHHHCCCHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHCCCCCHHHCCCCCHHCCC
SFNVKAIPATYLVDSKGVIISDNLRGAELEAKLKELLKS
CCCEEECCEEEEECCCCEEEECCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNTIKYKITALCICLFMVSNTQAQKKKTAAPVAASYTIEGNVTGLEEGTTVKLIPGGTHS
CCCEEHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEEECCEEECCCCCEEEEEECCCCC
SELPVAETTLKDGKFTFTGKLKEPRYFYISFGKNKGIIPVMAENSKIKITASGSVSNDEG
CCCCCHHHCCCCCEEEEEEECCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCC
QYIKFKDIAVTGSKSHDFYTKETAFKAELDKDYAAYHVGIDELSNKVGKARKEGNKKALD
CEEEEEEEEEECCCCCCCEECCHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCHHHHH
SLYGTEQWKVFEAKEKAFFTKVEKTTLDLIAKHKETWWGPFFMMTNYSYFTPEQKPLYDQ
HHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCHHHH
FSETAKKSYYGQILDKDLNPKSLIGTSIANFSLKDKDGKPYAAKDITAGKKYILVDFWAS
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCEECCCCCCCCEEEEEEEHHH
WCGPCRKEIPNLKTAYSEYSGKGFEILSISIDKDEKAWQKALGQENMQWHNLLDDDKVSK
HCCHHHHHCCCHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHCCCCCHHHCCCCCHHCCC
SFNVKAIPATYLVDSKGVIISDNLRGAELEAKLKELLKS
CCCEEECCEEEEECCCCEEEECCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA