| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is resA [H]
Identifier: 146299770
GI number: 146299770
Start: 2348279
End: 2349478
Strand: Direct
Name: resA [H]
Synonym: Fjoh_2010
Alternate gene names: 146299770
Gene position: 2348279-2349478 (Clockwise)
Preceding gene: 146299769
Following gene: 146299771
Centisome position: 38.52
GC content: 32.33
Gene sequence:
>1200_bases ATGAATACAATTAAATATAAAATAACAGCTTTGTGCATCTGTTTGTTTATGGTTTCAAACACTCAGGCACAAAAGAAAAA AACAGCTGCTCCGGTGGCGGCATCTTATACAATTGAAGGAAACGTTACAGGTCTTGAAGAAGGAACAACTGTAAAATTAA TTCCGGGTGGTACACATTCATCAGAATTACCGGTTGCAGAAACTACGCTGAAAGATGGTAAATTTACCTTTACAGGAAAA TTAAAAGAACCGAGATATTTCTATATATCGTTTGGAAAAAATAAAGGAATTATTCCGGTAATGGCAGAAAATTCTAAAAT AAAAATTACTGCTTCGGGCAGTGTTTCAAATGATGAAGGACAGTATATTAAATTTAAAGACATAGCAGTTACAGGTTCTA AATCACATGATTTTTACACAAAAGAAACGGCTTTTAAAGCAGAGTTAGATAAAGATTATGCTGCTTATCATGTTGGAATA GATGAATTGAGCAATAAAGTAGGCAAAGCCAGAAAAGAAGGAAATAAAAAAGCTTTAGACTCTCTTTATGGCACTGAACA ATGGAAAGTTTTTGAAGCAAAAGAAAAAGCATTTTTTACCAAAGTAGAAAAAACAACATTAGATCTTATTGCAAAACATA AAGAAACCTGGTGGGGACCGTTTTTTATGATGACAAATTACAGTTATTTTACACCCGAACAAAAACCATTGTACGATCAG TTTTCTGAAACAGCAAAGAAAAGTTACTACGGGCAAATTTTAGATAAAGATTTAAATCCGAAATCATTAATTGGAACCAG CATTGCTAATTTCAGTTTAAAAGACAAAGACGGAAAACCATATGCTGCAAAAGATATTACAGCAGGGAAAAAATACATTT TGGTTGATTTTTGGGCTTCTTGGTGCGGACCATGCCGAAAAGAAATTCCAAACCTAAAAACAGCCTATTCAGAATATTCT GGAAAAGGATTTGAAATTTTAAGTATTTCAATTGACAAAGATGAAAAAGCCTGGCAGAAAGCATTAGGACAAGAAAATAT GCAATGGCATAATCTTTTAGATGATGACAAAGTAAGCAAATCATTTAACGTAAAAGCAATTCCGGCAACCTATTTAGTTG ATAGTAAAGGTGTAATTATCAGCGATAATTTAAGAGGTGCAGAATTAGAAGCAAAATTAAAAGAACTATTAAAATCTTAA
Upstream 100 bases:
>100_bases GAAACGGAACATTAACACAAAACGTAGATAAATAATAACTCAAAAGCTTCCTGATTAGGAACTCCAAAAGGGAAGCTTTT CTATAAAACATCGATCAAAA
Downstream 100 bases:
>100_bases TTTTAAGTTTATAGCCGCAGTTTACAGTCTCAATCAACACTGTAACTGAAAACTGGGACTGAAAACTGAGACAAAAAAAC TAAAAAAATAACTCACATGA
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MNTIKYKITALCICLFMVSNTQAQKKKTAAPVAASYTIEGNVTGLEEGTTVKLIPGGTHSSELPVAETTLKDGKFTFTGK LKEPRYFYISFGKNKGIIPVMAENSKIKITASGSVSNDEGQYIKFKDIAVTGSKSHDFYTKETAFKAELDKDYAAYHVGI DELSNKVGKARKEGNKKALDSLYGTEQWKVFEAKEKAFFTKVEKTTLDLIAKHKETWWGPFFMMTNYSYFTPEQKPLYDQ FSETAKKSYYGQILDKDLNPKSLIGTSIANFSLKDKDGKPYAAKDITAGKKYILVDFWASWCGPCRKEIPNLKTAYSEYS GKGFEILSISIDKDEKAWQKALGQENMQWHNLLDDDKVSKSFNVKAIPATYLVDSKGVIISDNLRGAELEAKLKELLKS
Sequences:
>Translated_399_residues MNTIKYKITALCICLFMVSNTQAQKKKTAAPVAASYTIEGNVTGLEEGTTVKLIPGGTHSSELPVAETTLKDGKFTFTGK LKEPRYFYISFGKNKGIIPVMAENSKIKITASGSVSNDEGQYIKFKDIAVTGSKSHDFYTKETAFKAELDKDYAAYHVGI DELSNKVGKARKEGNKKALDSLYGTEQWKVFEAKEKAFFTKVEKTTLDLIAKHKETWWGPFFMMTNYSYFTPEQKPLYDQ FSETAKKSYYGQILDKDLNPKSLIGTSIANFSLKDKDGKPYAAKDITAGKKYILVDFWASWCGPCRKEIPNLKTAYSEYS GKGFEILSISIDKDEKAWQKALGQENMQWHNLLDDDKVSKSFNVKAIPATYLVDSKGVIISDNLRGAELEAKLKELLKS >Mature_399_residues MNTIKYKITALCICLFMVSNTQAQKKKTAAPVAASYTIEGNVTGLEEGTTVKLIPGGTHSSELPVAETTLKDGKFTFTGK LKEPRYFYISFGKNKGIIPVMAENSKIKITASGSVSNDEGQYIKFKDIAVTGSKSHDFYTKETAFKAELDKDYAAYHVGI DELSNKVGKARKEGNKKALDSLYGTEQWKVFEAKEKAFFTKVEKTTLDLIAKHKETWWGPFFMMTNYSYFTPEQKPLYDQ FSETAKKSYYGQILDKDLNPKSLIGTSIANFSLKDKDGKPYAAKDITAGKKYILVDFWASWCGPCRKEIPNLKTAYSEYS GKGFEILSISIDKDEKAWQKALGQENMQWHNLLDDDKVSKSFNVKAIPATYLVDSKGVIISDNLRGAELEAKLKELLKS
Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 44703; Mature: 44703
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTIKYKITALCICLFMVSNTQAQKKKTAAPVAASYTIEGNVTGLEEGTTVKLIPGGTHS CCCEEHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEEECCEEECCCCCEEEEEECCCCC SELPVAETTLKDGKFTFTGKLKEPRYFYISFGKNKGIIPVMAENSKIKITASGSVSNDEG CCCCCHHHCCCCCEEEEEEECCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCC QYIKFKDIAVTGSKSHDFYTKETAFKAELDKDYAAYHVGIDELSNKVGKARKEGNKKALD CEEEEEEEEEECCCCCCCEECCHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCHHHHH SLYGTEQWKVFEAKEKAFFTKVEKTTLDLIAKHKETWWGPFFMMTNYSYFTPEQKPLYDQ HHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCHHHH FSETAKKSYYGQILDKDLNPKSLIGTSIANFSLKDKDGKPYAAKDITAGKKYILVDFWAS HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCEECCCCCCCCEEEEEEEHHH WCGPCRKEIPNLKTAYSEYSGKGFEILSISIDKDEKAWQKALGQENMQWHNLLDDDKVSK HCCHHHHHCCCHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHCCCCCHHHCCCCCHHCCC SFNVKAIPATYLVDSKGVIISDNLRGAELEAKLKELLKS CCCEEECCEEEEECCCCEEEECCCCCCHHHHHHHHHHCC >Mature Secondary Structure MNTIKYKITALCICLFMVSNTQAQKKKTAAPVAASYTIEGNVTGLEEGTTVKLIPGGTHS CCCEEHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEEECCEEECCCCCEEEEEECCCCC SELPVAETTLKDGKFTFTGKLKEPRYFYISFGKNKGIIPVMAENSKIKITASGSVSNDEG CCCCCHHHCCCCCEEEEEEECCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCC QYIKFKDIAVTGSKSHDFYTKETAFKAELDKDYAAYHVGIDELSNKVGKARKEGNKKALD CEEEEEEEEEECCCCCCCEECCHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCHHHHH SLYGTEQWKVFEAKEKAFFTKVEKTTLDLIAKHKETWWGPFFMMTNYSYFTPEQKPLYDQ HHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCHHHH FSETAKKSYYGQILDKDLNPKSLIGTSIANFSLKDKDGKPYAAKDITAGKKYILVDFWAS HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCEECCCCCCCCEEEEEEEHHH WCGPCRKEIPNLKTAYSEYSGKGFEILSISIDKDEKAWQKALGQENMQWHNLLDDDKVSK HCCHHHHHCCCHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHCCCCCHHHCCCCCHHCCC SFNVKAIPATYLVDSKGVIISDNLRGAELEAKLKELLKS CCCEEECCEEEEECCCCEEEECCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA