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The map label for this gene is nlpC [H]

Identifier: 146299714

GI number: 146299714

Start: 2266712

End: 2267866

Strand: Direct

Name: nlpC [H]

Synonym: Fjoh_1954

Alternate gene names: 146299714

Gene position: 2266712-2267866 (Clockwise)

Preceding gene: 146299712

Following gene: 146299721

Centisome position: 37.18

GC content: 33.51

Gene sequence:

>1155_bases
ATGGTTTTTAGATTAATTATAGTATTGTTTTTTTTTAGTGTTGGTGTTTTTTCTCAGGAAAAATTTATCAAACATAAAAT
TTCAAAAGGAGAAAACCTTACTGTAATTGCTAAAAAATATGGAGTAAAGGCAAAAGACATTCAAGAAGCGAATCCAAATG
CTCCTAAAATTTTAAAACTAAATTCGGTTTTATTGATCCCGAATAAAAATGTAAAGTCAGCTCAAAATTCTACACCATCA
ATAGCGAACAATACTTCTGTAAATACTACTCCTGGTTCGCACGAAGTTTTACAAAAAGAAACACTTTGGGGAATCTCTAA
AAAATACAATGTTAGTGTTGATGATTTGAAAAAAGCAAATCCTGCGCTGGAAACGGAGGGACTGAAAATTGGACAGCAAA
TCGTTATTCCAGTAAATACAGCAGCCATTGCTGAAAATACAGCTCCGGAAACAGAAAAACCGGAAATCATTTCTTCTACA
GATGTTGACCTTGAGGTTAAAGTACAGCCAAAAGAAACAAAATACGCAATCGCAAAAAAATACGGAATAACAGTAAAAGA
ACTGGAGCGTCAAAATCCTTCTATAAAAGCTAAACTTCCAGTTGGATATGTTTTGAAAATCAAAACAACAAAAGAGAAAG
CAGATGCTGTAAATGCTTTGAATGAACCTAAGACATTATTAGACGAAAGTTTTGGTTCTGAGCCTCAAATTGCAGATAAT
AATACAGCAGTTAAAAAAGATTCTACATTTGTTTATAATGGAAATCATTCTGGATTAATCGACCAGATTATTGTAAGTGC
AACTGAAAATATTGGAACCCGTTATCGTTCAGGCGGTACTACAAAAGCAGGTTTTGACTGTTCAGGTTTAATGTTCTGCA
CTTTTGGAAATTTTGATATAAAACTGCCAAGAAGTTCAATCGAACAATCTCGTATAGGAACTAAAGTAGCTTCTGCAGAA
GCGCAAAAAGGAGATTTGATTTTCTTTAAAACTAACGGCAGACGTCATATTAATCATGTAGGAATGGTGGTTGAAGCAGC
TGACGGAGAAATTAAGTTTGTGCACTCATCAACACATGGCGGAGTTATGATTTCTTCTACAAAAGAACCTTATTATCAAA
GAACTTTTTCTCAGGTAAACCGTATTTTAGAATAA

Upstream 100 bases:

>100_bases
TAAAAAGTTAAATTCGCCTTTTAGGCAATATATTTGTGCTTTTTGAGTTTCAAAATAGTGTCTAAACTTAAAAAAGGAGT
TATAACTTTAATAGGTGAGT

Downstream 100 bases:

>100_bases
GAAACTATTTAAAAATTGCTTTTTTAATTCTTCAACCGGAATAGGTTTGTTTAAAAAATCACAAACATATTCGTTTTTTC
TAATTTGTTCTATTTCATCA

Product: NLP/P60 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MVFRLIIVLFFFSVGVFSQEKFIKHKISKGENLTVIAKKYGVKAKDIQEANPNAPKILKLNSVLLIPNKNVKSAQNSTPS
IANNTSVNTTPGSHEVLQKETLWGISKKYNVSVDDLKKANPALETEGLKIGQQIVIPVNTAAIAENTAPETEKPEIISST
DVDLEVKVQPKETKYAIAKKYGITVKELERQNPSIKAKLPVGYVLKIKTTKEKADAVNALNEPKTLLDESFGSEPQIADN
NTAVKKDSTFVYNGNHSGLIDQIIVSATENIGTRYRSGGTTKAGFDCSGLMFCTFGNFDIKLPRSSIEQSRIGTKVASAE
AQKGDLIFFKTNGRRHINHVGMVVEAADGEIKFVHSSTHGGVMISSTKEPYYQRTFSQVNRILE

Sequences:

>Translated_384_residues
MVFRLIIVLFFFSVGVFSQEKFIKHKISKGENLTVIAKKYGVKAKDIQEANPNAPKILKLNSVLLIPNKNVKSAQNSTPS
IANNTSVNTTPGSHEVLQKETLWGISKKYNVSVDDLKKANPALETEGLKIGQQIVIPVNTAAIAENTAPETEKPEIISST
DVDLEVKVQPKETKYAIAKKYGITVKELERQNPSIKAKLPVGYVLKIKTTKEKADAVNALNEPKTLLDESFGSEPQIADN
NTAVKKDSTFVYNGNHSGLIDQIIVSATENIGTRYRSGGTTKAGFDCSGLMFCTFGNFDIKLPRSSIEQSRIGTKVASAE
AQKGDLIFFKTNGRRHINHVGMVVEAADGEIKFVHSSTHGGVMISSTKEPYYQRTFSQVNRILE
>Mature_384_residues
MVFRLIIVLFFFSVGVFSQEKFIKHKISKGENLTVIAKKYGVKAKDIQEANPNAPKILKLNSVLLIPNKNVKSAQNSTPS
IANNTSVNTTPGSHEVLQKETLWGISKKYNVSVDDLKKANPALETEGLKIGQQIVIPVNTAAIAENTAPETEKPEIISST
DVDLEVKVQPKETKYAIAKKYGITVKELERQNPSIKAKLPVGYVLKIKTTKEKADAVNALNEPKTLLDESFGSEPQIADN
NTAVKKDSTFVYNGNHSGLIDQIIVSATENIGTRYRSGGTTKAGFDCSGLMFCTFGNFDIKLPRSSIEQSRIGTKVASAE
AQKGDLIFFKTNGRRHINHVGMVVEAADGEIKFVHSSTHGGVMISSTKEPYYQRTFSQVNRILE

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=115, Percent_Identity=42.6086956521739, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1788001, Length=127, Percent_Identity=41.7322834645669, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1787944, Length=120, Percent_Identity=35.8333333333333, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1786421, Length=161, Percent_Identity=30.4347826086957, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 42131; Mature: 42131

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFRLIIVLFFFSVGVFSQEKFIKHKISKGENLTVIAKKYGVKAKDIQEANPNAPKILKL
CHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEHHHCCCHHHHHCCCCCCCEEEEE
NSVLLIPNKNVKSAQNSTPSIANNTSVNTTPGSHEVLQKETLWGISKKYNVSVDDLKKAN
CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCHHHHHHCC
PALETEGLKIGQQIVIPVNTAAIAENTAPETEKPEIISSTDVDLEVKVQPKETKYAIAKK
CCCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCHHHEEEHHH
YGITVKELERQNPSIKAKLPVGYVLKIKTTKEKADAVNALNEPKTLLDESFGSEPQIADN
HCCCHHHHHHCCCCEEEECCEEEEEEEECCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCC
NTAVKKDSTFVYNGNHSGLIDQIIVSATENIGTRYRSGGTTKAGFDCSGLMFCTFGNFDI
CCEEECCCEEEECCCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCEEEEEECCEEE
KLPRSSIEQSRIGTKVASAEAQKGDLIFFKTNGRRHINHVGMVVEAADGEIKFVHSSTHG
ECCHHHHHHHHHCCHHHHCCCCCCCEEEEECCCCCEEEEEEEEEEECCCEEEEEEECCCC
GVMISSTKEPYYQRTFSQVNRILE
CEEEECCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVFRLIIVLFFFSVGVFSQEKFIKHKISKGENLTVIAKKYGVKAKDIQEANPNAPKILKL
CHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEHHHCCCHHHHHCCCCCCCEEEEE
NSVLLIPNKNVKSAQNSTPSIANNTSVNTTPGSHEVLQKETLWGISKKYNVSVDDLKKAN
CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCHHHHHHCC
PALETEGLKIGQQIVIPVNTAAIAENTAPETEKPEIISSTDVDLEVKVQPKETKYAIAKK
CCCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCHHHEEEHHH
YGITVKELERQNPSIKAKLPVGYVLKIKTTKEKADAVNALNEPKTLLDESFGSEPQIADN
HCCCHHHHHHCCCCEEEECCEEEEEEEECCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCC
NTAVKKDSTFVYNGNHSGLIDQIIVSATENIGTRYRSGGTTKAGFDCSGLMFCTFGNFDI
CCEEECCCEEEECCCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCEEEEEECCEEE
KLPRSSIEQSRIGTKVASAEAQKGDLIFFKTNGRRHINHVGMVVEAADGEIKFVHSSTHG
ECCHHHHHHHHHCCHHHHCCCCCCCEEEEECCCCCEEEEEEEEEEECCCEEEEEEECCCC
GVMISSTKEPYYQRTFSQVNRILE
CEEEECCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]