| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is acnB [H]
Identifier: 146299711
GI number: 146299711
Start: 2259879
End: 2262650
Strand: Direct
Name: acnB [H]
Synonym: Fjoh_1951
Alternate gene names: 146299711
Gene position: 2259879-2262650 (Clockwise)
Preceding gene: 146299710
Following gene: 146299712
Centisome position: 37.07
GC content: 36.65
Gene sequence:
>2772_bases ATGAACATTTATAAGGATTATATCCAAGAAATTGAAGAACGTAAAAATCAGGGACTTCACCCAAAACCAATTGATAGTGC TGAATTATTAAGCGAAATTATTGCACAAATTAAAGATACAAATAACGAATACAGAGAAGATTCTCTTAAGTTTTTTATTT ACAATACTTTACCAGGAACTACAAGTGCTGCTGGTGAAAAAGCTAAGTTTTTAAAAGAGATTATTCTGGGTCAGTCTGTT GTAGCAGAAATTACACCAGCATTTGCTTTTGAATTATTATCTCACATGAAAGGCGGGCCTTCTATCGAAGTGTTACTTGA TTTAGCTTTAGGTAATGATGCTGCTATAGCAAAAGAAGCAGCAAAAGTTCTTAAAACACAAGTTTTCCTTTACGAAGCAG ATACAGATCGTTTAGTAGAGGCATTCAAAAATAATAATACAATTGCTAAAGAAATCCTTGAGAGTTATGCTCAAGCAGAG TTCTTTACAAAACTTCCAGAAGTAGCTGACGAAATTAAGGTAGTTACATTTATTGCTGGTGAAGGTGATATTTCAACAGA TTTACTTTCTCCGGGTAACCAAGCGCACTCTCGTTCAGATCGTGAGCTTCACGGACAATGTATGATTACGCCTCAGGCAC AGCAGGAAATTAAAGCATTACAAGCACAGCATCCAGATAAAAGCGTAATGTTAATCGCTGAAAAAGGAACAATGGGAGTT GGTTCTTCTAGAATGTCAGGTGTAAACAACGTGGCACTTTGGACAGGAAAACAAGCAAGTCCTTATATTCCATTTGTTAA TATTGCTCCAATTGTTGGAGGAACAAACGGAATTTCTCCAATTTTCTTAACAACTGTAGATGTTACTGGCGGTATTGGTT TAGACCTTAAAAACTGGGTTAAAAAAGTTGATGCTGACGGAAATGTTATTCGTAACGAAAATGACGAACCAATTTTAGAG CAAACTTATTCTGTTGCTACAGGAACGGTTCTTACAATCAATATTAAAGAGAAAAAGCTTTATAACGGAGATCAGGAATT GATCGACATTTCTAAAGCATTTACTCCTCAAAAAATGGAATTTATCAAAGCAGGTGGTTCTTATGCTATCGTATTTGGTA AAAAACTTCAAACATTAGCAGCAAAAGTTTTAGATGTTGAGGCTCCTCTTGTATATGCTCCGTCAAAAGAAGTTTCTTAT GAAGGACAAGGCCTTACTGCAGTGGAAAAAATCTTCAACAAAAATGCAGTTGGAATCGCTCCGGGTAAAGTATTACACGC TGGTTCTGACGTTCGTGTTGAAGTTAATATTGTAGGTTCTCAGGATACTACAGGTTTAATGACTGCTCAGGAATTAGAAT CTATGGCAGCTACAGTAATTTCACCAATCGTTGATGGTGCTTACCAGTCAGGATGTCATACTGCTTCTGTTTGGGATAAA AAAGCACAGGCAAACATTCCAAAATTGATGAAATTCATGAACGATTTTGGTTTGATCACAGCTCGTGACCCAAAAGGTGT TTATCATTCAATGACAGACGTAATCCATAAAGTACTTAACGATATTACTATCGACGAGTGGGCAATCATTATTGGTGGTG ACTCTCATACAAGAATGTCAAAAGGTGTTGCTTTTGGTGCTGACTCAGGAACTGTTGCTCTTGCATTGGCTACTGGAGAA GCTTCAATGCCAATTCCAGAATCTGTAAAAGTTACTTTTAAAGGAGATATGAAAGGGTATATGGATTTCCGTGATGTGGT TCATGCTACTCAAGCGCAAATGCTTCACCAATTTGGAGGAGAAAATGTATTCCAAGGAAGAATTATTGAGGTTCACATTG GAACATTAACAGCTGACCAAGCCTTTACATTTACTGACTGGACTGCAGAGATGAAAGCAAAAGCTTCTATTTGTATTTCT GAAGATGATACTTTGATCGAATCATTGGAAATTGCTAAAGGCAGAATCCAAATCATGATCGACAAAGGAATGGATAACGA TAAACACGTTCTTCAAGGATTGATCAACAAAGCTGATAAGAGAATTGCTGAAATTAAATCGGCAGAGAAACCAGCTTTAA CTCCAGACGCAAATGCTAAATATTATGCTGAAGTTGTAGTTGATCTTGATTTAATTGCAGAGCCTATGATTGCTGATCCA GACGTAAATAATGCTGATGTTTCAAAAAGATACACGCACGATACTATTAGACCTTTATCTTTCTACGGTGGAGTGAAAAA AGTAGATCTTGGATTTATTGGATCTTGTATGGTTCATAAAGGAGATATGAAAATCCTTGCTCAAATGTTGAAAAATGTTG AAGCACAAACAGGAAAAGTGGAATTCAACGCTCCTCTTGTTGTTGCTCCTCCAACATATAACATTGTAGATGAATTGAAA GCTGAAGGTGACTGGGAAGTATTACAGAAATATTCTGGTTTTGAATTCGATGATAATGCTCCAAAAGGTGCTGCGCGTAC AGAATATGAAAACATGTTGTATTTAGAGCGTCCAGGTTGTAACCTTTGTATGGGTAACCAAGAAAAAGCTGCAAAAGGAG ATACGGTAATGGCAACTTCTACGCGTCTTTTCCAAGGAAGAGTTGTAGAAGATAAAGAGGGTAAAAAAGGAGAATCATTA CTTTCTTCTACTCCAGTTGTAGTATTGTCTACAATTTTAGGAAGAACTCCTACTATTGAAGAATATACAGCAGCTGTAGA TGGTATCAACTTAACTAAGTTTGCGCCTTCAAACAAATCGTTAGTAATGTAA
Upstream 100 bases:
>100_bases TAACAATAATAATTTTTGAAAAGGCGACTTCTATTATATTTTTTTTAATTATCGGCTTTAATGCTTAAATTTGCATAAAA AAAATAAATCTGCCTTAATT
Downstream 100 bases:
>100_bases TCTTACGATTATTAATATTATAAAGCCCGAGTGATAAACTCGGGCTTTTTCTTTTATAGCTCTTCTATTTTTTGTAACTT GTCATGTTCAAAATAAAAAA
Product: bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Products: NA
Alternate protein names: Aconitase 2; 2-methylisocitrate dehydratase; Citrate hydro-lyase 2 [H]
Number of amino acids: Translated: 923; Mature: 923
Protein sequence:
>923_residues MNIYKDYIQEIEERKNQGLHPKPIDSAELLSEIIAQIKDTNNEYREDSLKFFIYNTLPGTTSAAGEKAKFLKEIILGQSV VAEITPAFAFELLSHMKGGPSIEVLLDLALGNDAAIAKEAAKVLKTQVFLYEADTDRLVEAFKNNNTIAKEILESYAQAE FFTKLPEVADEIKVVTFIAGEGDISTDLLSPGNQAHSRSDRELHGQCMITPQAQQEIKALQAQHPDKSVMLIAEKGTMGV GSSRMSGVNNVALWTGKQASPYIPFVNIAPIVGGTNGISPIFLTTVDVTGGIGLDLKNWVKKVDADGNVIRNENDEPILE QTYSVATGTVLTINIKEKKLYNGDQELIDISKAFTPQKMEFIKAGGSYAIVFGKKLQTLAAKVLDVEAPLVYAPSKEVSY EGQGLTAVEKIFNKNAVGIAPGKVLHAGSDVRVEVNIVGSQDTTGLMTAQELESMAATVISPIVDGAYQSGCHTASVWDK KAQANIPKLMKFMNDFGLITARDPKGVYHSMTDVIHKVLNDITIDEWAIIIGGDSHTRMSKGVAFGADSGTVALALATGE ASMPIPESVKVTFKGDMKGYMDFRDVVHATQAQMLHQFGGENVFQGRIIEVHIGTLTADQAFTFTDWTAEMKAKASICIS EDDTLIESLEIAKGRIQIMIDKGMDNDKHVLQGLINKADKRIAEIKSAEKPALTPDANAKYYAEVVVDLDLIAEPMIADP DVNNADVSKRYTHDTIRPLSFYGGVKKVDLGFIGSCMVHKGDMKILAQMLKNVEAQTGKVEFNAPLVVAPPTYNIVDELK AEGDWEVLQKYSGFEFDDNAPKGAARTEYENMLYLERPGCNLCMGNQEKAAKGDTVMATSTRLFQGRVVEDKEGKKGESL LSSTPVVVLSTILGRTPTIEEYTAAVDGINLTKFAPSNKSLVM
Sequences:
>Translated_923_residues MNIYKDYIQEIEERKNQGLHPKPIDSAELLSEIIAQIKDTNNEYREDSLKFFIYNTLPGTTSAAGEKAKFLKEIILGQSV VAEITPAFAFELLSHMKGGPSIEVLLDLALGNDAAIAKEAAKVLKTQVFLYEADTDRLVEAFKNNNTIAKEILESYAQAE FFTKLPEVADEIKVVTFIAGEGDISTDLLSPGNQAHSRSDRELHGQCMITPQAQQEIKALQAQHPDKSVMLIAEKGTMGV GSSRMSGVNNVALWTGKQASPYIPFVNIAPIVGGTNGISPIFLTTVDVTGGIGLDLKNWVKKVDADGNVIRNENDEPILE QTYSVATGTVLTINIKEKKLYNGDQELIDISKAFTPQKMEFIKAGGSYAIVFGKKLQTLAAKVLDVEAPLVYAPSKEVSY EGQGLTAVEKIFNKNAVGIAPGKVLHAGSDVRVEVNIVGSQDTTGLMTAQELESMAATVISPIVDGAYQSGCHTASVWDK KAQANIPKLMKFMNDFGLITARDPKGVYHSMTDVIHKVLNDITIDEWAIIIGGDSHTRMSKGVAFGADSGTVALALATGE ASMPIPESVKVTFKGDMKGYMDFRDVVHATQAQMLHQFGGENVFQGRIIEVHIGTLTADQAFTFTDWTAEMKAKASICIS EDDTLIESLEIAKGRIQIMIDKGMDNDKHVLQGLINKADKRIAEIKSAEKPALTPDANAKYYAEVVVDLDLIAEPMIADP DVNNADVSKRYTHDTIRPLSFYGGVKKVDLGFIGSCMVHKGDMKILAQMLKNVEAQTGKVEFNAPLVVAPPTYNIVDELK AEGDWEVLQKYSGFEFDDNAPKGAARTEYENMLYLERPGCNLCMGNQEKAAKGDTVMATSTRLFQGRVVEDKEGKKGESL LSSTPVVVLSTILGRTPTIEEYTAAVDGINLTKFAPSNKSLVM >Mature_923_residues MNIYKDYIQEIEERKNQGLHPKPIDSAELLSEIIAQIKDTNNEYREDSLKFFIYNTLPGTTSAAGEKAKFLKEIILGQSV VAEITPAFAFELLSHMKGGPSIEVLLDLALGNDAAIAKEAAKVLKTQVFLYEADTDRLVEAFKNNNTIAKEILESYAQAE FFTKLPEVADEIKVVTFIAGEGDISTDLLSPGNQAHSRSDRELHGQCMITPQAQQEIKALQAQHPDKSVMLIAEKGTMGV GSSRMSGVNNVALWTGKQASPYIPFVNIAPIVGGTNGISPIFLTTVDVTGGIGLDLKNWVKKVDADGNVIRNENDEPILE QTYSVATGTVLTINIKEKKLYNGDQELIDISKAFTPQKMEFIKAGGSYAIVFGKKLQTLAAKVLDVEAPLVYAPSKEVSY EGQGLTAVEKIFNKNAVGIAPGKVLHAGSDVRVEVNIVGSQDTTGLMTAQELESMAATVISPIVDGAYQSGCHTASVWDK KAQANIPKLMKFMNDFGLITARDPKGVYHSMTDVIHKVLNDITIDEWAIIIGGDSHTRMSKGVAFGADSGTVALALATGE ASMPIPESVKVTFKGDMKGYMDFRDVVHATQAQMLHQFGGENVFQGRIIEVHIGTLTADQAFTFTDWTAEMKAKASICIS EDDTLIESLEIAKGRIQIMIDKGMDNDKHVLQGLINKADKRIAEIKSAEKPALTPDANAKYYAEVVVDLDLIAEPMIADP DVNNADVSKRYTHDTIRPLSFYGGVKKVDLGFIGSCMVHKGDMKILAQMLKNVEAQTGKVEFNAPLVVAPPTYNIVDELK AEGDWEVLQKYSGFEFDDNAPKGAARTEYENMLYLERPGCNLCMGNQEKAAKGDTVMATSTRLFQGRVVEDKEGKKGESL LSSTPVVVLSTILGRTPTIEEYTAAVDGINLTKFAPSNKSLVM
Specific function: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate as well as the dehydration of 2-methylisocitrate to cis-2-methylaconitate [H]
COG id: COG1049
COG function: function code C; Aconitase B
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aconitase/IPM isomerase family [H]
Homologues:
Organism=Escherichia coli, GI2367097, Length=931, Percent_Identity=30.9344790547798, Blast_Score=311, Evalue=2e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015931 - InterPro: IPR015937 - InterPro: IPR001030 - InterPro: IPR015928 - InterPro: IPR015932 - InterPro: IPR018136 - InterPro: IPR004406 - InterPro: IPR015930 - InterPro: IPR015933 - InterPro: IPR015929 [H]
Pfam domain/function: PF00330 Aconitase; PF06434 Aconitase_2_N; PF11791 Aconitase_B_N [H]
EC number: =4.2.1.3; =4.2.1.99 [H]
Molecular weight: Translated: 100417; Mature: 100417
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIYKDYIQEIEERKNQGLHPKPIDSAELLSEIIAQIKDTNNEYREDSLKFFIYNTLPGT CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCEEEEEEECCCCC TSAAGEKAKFLKEIILGQSVVAEITPAFAFELLSHMKGGPSIEVLLDLALGNDAAIAKEA CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHH AKVLKTQVFLYEADTDRLVEAFKNNNTIAKEILESYAQAEFFTKLPEVADEIKVVTFIAG HHHHHHEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEC EGDISTDLLSPGNQAHSRSDRELHGQCMITPQAQQEIKALQAQHPDKSVMLIAEKGTMGV CCCCCHHHCCCCCHHCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCCCC GSSRMSGVNNVALWTGKQASPYIPFVNIAPIVGGTNGISPIFLTTVDVTGGIGLDLKNWV CCHHHCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCCCHHHHH KKVDADGNVIRNENDEPILEQTYSVATGTVLTINIKEKKLYNGDQELIDISKAFTPQKME HHHCCCCCEECCCCCCCHHHHHHHHCCCEEEEEEEEHHHHCCCCHHHHHHHHHCCHHHHH FIKAGGSYAIVFGKKLQTLAAKVLDVEAPLVYAPSKEVSYEGQGLTAVEKIFNKNAVGIA HHHCCCCEEEEECHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCC PGKVLHAGSDVRVEVNIVGSQDTTGLMTAQELESMAATVISPIVDGAYQSGCHTASVWDK CCCEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC KAQANIPKLMKFMNDFGLITARDPKGVYHSMTDVIHKVLNDITIDEWAIIIGGDSHTRMS HHHCCHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHH KGVAFGADSGTVALALATGEASMPIPESVKVTFKGDMKGYMDFRDVVHATQAQMLHQFGG CCEEECCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC ENVFQGRIIEVHIGTLTADQAFTFTDWTAEMKAKASICISEDDTLIESLEIAKGRIQIMI CCEECCEEEEEEEEEEECCCEEEEECCHHHHHCCEEEEECCCHHHHHHHHHCCCEEEEEE DKGMDNDKHVLQGLINKADKRIAEIKSAEKPALTPDANAKYYAEVVVDLDLIAEPMIADP ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEHHHHCCCCCCCC DVNNADVSKRYTHDTIRPLSFYGGVKKVDLGFIGSCMVHKGDMKILAQMLKNVEAQTGKV CCCCCCCCHHHCCCCCCHHHHHCCCEEECCCHHCHHEEECCCHHHHHHHHHCCCCCCCEE EFNAPLVVAPPTYNIVDELKAEGDWEVLQKYSGFEFDDNAPKGAARTEYENMLYLERPGC EECCCEEECCCCCHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCC NLCMGNQEKAAKGDTVMATSTRLFQGRVVEDKEGKKGESLLSSTPVVVLSTILGRTPTIE CEEECCCCCCCCCCEEEEECHHHHCCEEECCCCCCCHHHHHHCCCHHHHHHHHCCCCCHH EYTAAVDGINLTKFAPSNKSLVM HHHHHHCCCEEEEECCCCCCCCC >Mature Secondary Structure MNIYKDYIQEIEERKNQGLHPKPIDSAELLSEIIAQIKDTNNEYREDSLKFFIYNTLPGT CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCEEEEEEECCCCC TSAAGEKAKFLKEIILGQSVVAEITPAFAFELLSHMKGGPSIEVLLDLALGNDAAIAKEA CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHH AKVLKTQVFLYEADTDRLVEAFKNNNTIAKEILESYAQAEFFTKLPEVADEIKVVTFIAG HHHHHHEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEC EGDISTDLLSPGNQAHSRSDRELHGQCMITPQAQQEIKALQAQHPDKSVMLIAEKGTMGV CCCCCHHHCCCCCHHCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCCCC GSSRMSGVNNVALWTGKQASPYIPFVNIAPIVGGTNGISPIFLTTVDVTGGIGLDLKNWV CCHHHCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCCCHHHHH KKVDADGNVIRNENDEPILEQTYSVATGTVLTINIKEKKLYNGDQELIDISKAFTPQKME HHHCCCCCEECCCCCCCHHHHHHHHCCCEEEEEEEEHHHHCCCCHHHHHHHHHCCHHHHH FIKAGGSYAIVFGKKLQTLAAKVLDVEAPLVYAPSKEVSYEGQGLTAVEKIFNKNAVGIA HHHCCCCEEEEECHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCC PGKVLHAGSDVRVEVNIVGSQDTTGLMTAQELESMAATVISPIVDGAYQSGCHTASVWDK CCCEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC KAQANIPKLMKFMNDFGLITARDPKGVYHSMTDVIHKVLNDITIDEWAIIIGGDSHTRMS HHHCCHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHH KGVAFGADSGTVALALATGEASMPIPESVKVTFKGDMKGYMDFRDVVHATQAQMLHQFGG CCEEECCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC ENVFQGRIIEVHIGTLTADQAFTFTDWTAEMKAKASICISEDDTLIESLEIAKGRIQIMI CCEECCEEEEEEEEEEECCCEEEEECCHHHHHCCEEEEECCCHHHHHHHHHCCCEEEEEE DKGMDNDKHVLQGLINKADKRIAEIKSAEKPALTPDANAKYYAEVVVDLDLIAEPMIADP ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEHHHHCCCCCCCC DVNNADVSKRYTHDTIRPLSFYGGVKKVDLGFIGSCMVHKGDMKILAQMLKNVEAQTGKV CCCCCCCCHHHCCCCCCHHHHHCCCEEECCCHHCHHEEECCCHHHHHHHHHCCCCCCCEE EFNAPLVVAPPTYNIVDELKAEGDWEVLQKYSGFEFDDNAPKGAARTEYENMLYLERPGC EECCCEEECCCCCHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCC NLCMGNQEKAAKGDTVMATSTRLFQGRVVEDKEGKKGESLLSSTPVVVLSTILGRTPTIE CEEECCCCCCCCCCEEEEECHHHHCCEEECCCCCCCHHHHHHCCCHHHHHHHHCCCCCHH EYTAAVDGINLTKFAPSNKSLVM HHHHHHCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]