| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yeaC [H]
Identifier: 146299710
GI number: 146299710
Start: 2258514
End: 2259467
Strand: Direct
Name: yeaC [H]
Synonym: Fjoh_1950
Alternate gene names: 146299710
Gene position: 2258514-2259467 (Clockwise)
Preceding gene: 146299709
Following gene: 146299711
Centisome position: 37.04
GC content: 34.49
Gene sequence:
>954_bases ATGTCTGACGTAACAGCAATTCATAATTTAGTTCAGAAACGTAACGAATTAAAAAACGAAATAGCAAAAATAATTGTAGG GCAGGATGCCGTAATTGACGAAATTTTACTTTGTATATTTTCTGGAGGACACGCTCTTTTAATTGGTGTTCCGGGGTTGG CAAAAACGTTAATGATAAATACTTTATCACAGGCTTTAGGTTTAGATTTTAAAAGAATTCAGTTTACACCAGACTTGATG CCTTCGGATATTTTAGGAAGTGAAATTCTGGACGAAAACAGACATTTTAAATTCATAAAAGGACCAATATTTTCTAATAT TATTCTAGCTGACGAGATTAATAGAACACCTCCAAAAACTCAGGCAGCTTTATTAGAAGCAATGCAGGAGCGTTCAGTAA CAATTGCAGGACAAAATTACAAATTAGATCTGCCTTATTTCGTTCTGGCAACACAAAATCCAATTGAGCAGGAAGGAACG TATCCTTTGCCGGAAGCTCAGTTAGACCGTTTTATGTTTGCTATTAAACTAGAATATCCAACTTTTGAAGAAGAAGTAAA AGTGGTTAAACAAACCACATCAGATAATAAAGTAGAAATTAGACCATTGTTTACGGCTCAGGAAATTATTGATTTCCAGC ATTTAATTCGTAGAATTCCAGTAGCAGATAATGTTATTGAATATGCTGTGACATTAGTGAGTAAAACTCGTCCCGATAAT GCTTTGACAAATGATTTTGTAAAAAACTATCTGGATTGGGGAGCAGGGCCGAGAGCTTCGCAAAATTTAATTTTAGCTGC AAAAGCCCACGCTGCTTTTAATGGTAAATTTTCACCGGATATTGAAGATGTAAAAGCAGTAGCAACCGGAATTTTACGTC ACAGAATTATTAAAAACTACAAAGCAGATGCAGAAGGAATAACTGAAGAAGTTATTATTAAAAAGCTGATGTAA
Upstream 100 bases:
>100_bases TAACAATTGGTTGAAAAAATAATTTTTATTAAATAAAGAAAAAGAGTTAGTTTTATGAATTCATTAAACTAACTCTTTTT AATTTTAAATATATTCATAA
Downstream 100 bases:
>100_bases ATTATAATATAATAAATTGGAAAAAGCTTGATAATCTTATCGGGCTTTTTTGTTTTTTATTTGAAATCAATATTAAGAAT TTGTCAATTTTGACATGAAT
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSDVTAIHNLVQKRNELKNEIAKIIVGQDAVIDEILLCIFSGGHALLIGVPGLAKTLMINTLSQALGLDFKRIQFTPDLM PSDILGSEILDENRHFKFIKGPIFSNIILADEINRTPPKTQAALLEAMQERSVTIAGQNYKLDLPYFVLATQNPIEQEGT YPLPEAQLDRFMFAIKLEYPTFEEEVKVVKQTTSDNKVEIRPLFTAQEIIDFQHLIRRIPVADNVIEYAVTLVSKTRPDN ALTNDFVKNYLDWGAGPRASQNLILAAKAHAAFNGKFSPDIEDVKAVATGILRHRIIKNYKADAEGITEEVIIKKLM
Sequences:
>Translated_317_residues MSDVTAIHNLVQKRNELKNEIAKIIVGQDAVIDEILLCIFSGGHALLIGVPGLAKTLMINTLSQALGLDFKRIQFTPDLM PSDILGSEILDENRHFKFIKGPIFSNIILADEINRTPPKTQAALLEAMQERSVTIAGQNYKLDLPYFVLATQNPIEQEGT YPLPEAQLDRFMFAIKLEYPTFEEEVKVVKQTTSDNKVEIRPLFTAQEIIDFQHLIRRIPVADNVIEYAVTLVSKTRPDN ALTNDFVKNYLDWGAGPRASQNLILAAKAHAAFNGKFSPDIEDVKAVATGILRHRIIKNYKADAEGITEEVIIKKLM >Mature_316_residues SDVTAIHNLVQKRNELKNEIAKIIVGQDAVIDEILLCIFSGGHALLIGVPGLAKTLMINTLSQALGLDFKRIQFTPDLMP SDILGSEILDENRHFKFIKGPIFSNIILADEINRTPPKTQAALLEAMQERSVTIAGQNYKLDLPYFVLATQNPIEQEGTY PLPEAQLDRFMFAIKLEYPTFEEEVKVVKQTTSDNKVEIRPLFTAQEIIDFQHLIRRIPVADNVIEYAVTLVSKTRPDNA LTNDFVKNYLDWGAGPRASQNLILAAKAHAAFNGKFSPDIEDVKAVATGILRHRIIKNYKADAEGITEEVIIKKLM
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 35480; Mature: 35348
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVTAIHNLVQKRNELKNEIAKIIVGQDAVIDEILLCIFSGGHALLIGVPGLAKTLMIN CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH TLSQALGLDFKRIQFTPDLMPSDILGSEILDENRHFKFIKGPIFSNIILADEINRTPPKT HHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCHHHCEEEECCCCCCCCHH QAALLEAMQERSVTIAGQNYKLDLPYFVLATQNPIEQEGTYPLPEAQLDRFMFAIKLEYP HHHHHHHHHHCCEEEECCCEEECCCEEEEECCCCCCCCCCCCCCHHHHHHEEEEEEECCC TFEEEVKVVKQTTSDNKVEIRPLFTAQEIIDFQHLIRRIPVADNVIEYAVTLVSKTRPDN CHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCH ALTNDFVKNYLDWGAGPRASQNLILAAKAHAAFNGKFSPDIEDVKAVATGILRHRIIKNY HHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC KADAEGITEEVIIKKLM CCCCCCHHHHHHHHHCC >Mature Secondary Structure SDVTAIHNLVQKRNELKNEIAKIIVGQDAVIDEILLCIFSGGHALLIGVPGLAKTLMIN CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH TLSQALGLDFKRIQFTPDLMPSDILGSEILDENRHFKFIKGPIFSNIILADEINRTPPKT HHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCHHHCEEEECCCCCCCCHH QAALLEAMQERSVTIAGQNYKLDLPYFVLATQNPIEQEGTYPLPEAQLDRFMFAIKLEYP HHHHHHHHHHCCEEEECCCEEECCCEEEEECCCCCCCCCCCCCCHHHHHHEEEEEEECCC TFEEEVKVVKQTTSDNKVEIRPLFTAQEIIDFQHLIRRIPVADNVIEYAVTLVSKTRPDN CHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCH ALTNDFVKNYLDWGAGPRASQNLILAAKAHAAFNGKFSPDIEDVKAVATGILRHRIIKNY HHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC KADAEGITEEVIIKKLM CCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]