| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299661
Identifier: 146299661
GI number: 146299661
Start: 2198556
End: 2199185
Strand: Direct
Name: 146299661
Synonym: Fjoh_1901
Alternate gene names: NA
Gene position: 2198556-2199185 (Clockwise)
Preceding gene: 146299660
Following gene: 146299665
Centisome position: 36.06
GC content: 32.22
Gene sequence:
>630_bases ATGCAAAACTTGATCAAAAGAATTATAGGTATTGGAGTTATTGTTTTATTAATTGTTCTGGCTTTTAAATATTGCCAGTT TAAGAAAGAAGACGATTCTGATATTCAGTACAATACTAATTTGATTCAGCAGCAGATTCTTAACGTTGGGAAATTGGTAG TTACCGAAGGGCATTTCTCAGAAGTGATTACCTATAAAAATCAGCAGAAATATTTGATGAACATGATTTCTTTTGAGAAA AAAGCACTTATTGTAGTTAATGCCAATGTAACCGTTGCCTACGATTTGCATAAAATGAAATACGATATCGACGAAAAAAA CAAAACAATCACGATTCTAAATATTCCAAAAGAAGAAATCACAATCAATCCTGATATTCAGTTTTATGATGTAGAACAAA GCAAACTGAATCCGTTTACAGGAGATGACTACAATAAAATCAACAAATCAGTAAAAGCCAATCTGGCGAAAAAAATCGAC CAGTCAACGCTAAAAACAAACGCCCAAAATAGATTGATAAGCGAATTGTCTAAAATTTTAATCCTGACCAATTCAATGGG CTGGAAACTGCAATACAACGGAAAGACTATTGAATCAGAAACTGAGCTCAATCAGGATTTGAAATTGTAA
Upstream 100 bases:
>100_bases TGAGATATAGTAATTTAATCAAGAATAGATTAGCGAAAATTCGTGAATTCGTGGCGGAAAAAAAGAAAAAATGAAGTAAA TTGGTCTAAAATATTTTAGA
Downstream 100 bases:
>100_bases TTTTTAATATTTTAAGGTTTTTTGCCCACGAGTTTAACCGATGAAACGGGTTTGCACTGGGATTTGTTTAAGTTTTAATA GGCATTTAATAAAATATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MQNLIKRIIGIGVIVLLIVLAFKYCQFKKEDDSDIQYNTNLIQQQILNVGKLVVTEGHFSEVITYKNQQKYLMNMISFEK KALIVVNANVTVAYDLHKMKYDIDEKNKTITILNIPKEEITINPDIQFYDVEQSKLNPFTGDDYNKINKSVKANLAKKID QSTLKTNAQNRLISELSKILILTNSMGWKLQYNGKTIESETELNQDLKL
Sequences:
>Translated_209_residues MQNLIKRIIGIGVIVLLIVLAFKYCQFKKEDDSDIQYNTNLIQQQILNVGKLVVTEGHFSEVITYKNQQKYLMNMISFEK KALIVVNANVTVAYDLHKMKYDIDEKNKTITILNIPKEEITINPDIQFYDVEQSKLNPFTGDDYNKINKSVKANLAKKID QSTLKTNAQNRLISELSKILILTNSMGWKLQYNGKTIESETELNQDLKL >Mature_209_residues MQNLIKRIIGIGVIVLLIVLAFKYCQFKKEDDSDIQYNTNLIQQQILNVGKLVVTEGHFSEVITYKNQQKYLMNMISFEK KALIVVNANVTVAYDLHKMKYDIDEKNKTITILNIPKEEITINPDIQFYDVEQSKLNPFTGDDYNKINKSVKANLAKKID QSTLKTNAQNRLISELSKILILTNSMGWKLQYNGKTIESETELNQDLKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24093; Mature: 24093
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNLIKRIIGIGVIVLLIVLAFKYCQFKKEDDSDIQYNTNLIQQQILNVGKLVVTEGHFS CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCEEEECCCHH EVITYKNQQKYLMNMISFEKKALIVVNANVTVAYDLHKMKYDIDEKNKTITILNIPKEEI HHHHCCCHHHHHHHHHHCCCCEEEEEECCEEEEEEHHHHEECCCCCCCEEEEEECCHHHE TINPDIQFYDVEQSKLNPFTGDDYNKINKSVKANLAKKIDQSTLKTNAQNRLISELSKIL EECCCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHE ILTNSMGWKLQYNGKTIESETELNQDLKL EEECCCCEEEEECCCEECCHHHCCCCCCC >Mature Secondary Structure MQNLIKRIIGIGVIVLLIVLAFKYCQFKKEDDSDIQYNTNLIQQQILNVGKLVVTEGHFS CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCEEEECCCHH EVITYKNQQKYLMNMISFEKKALIVVNANVTVAYDLHKMKYDIDEKNKTITILNIPKEEI HHHHCCCHHHHHHHHHHCCCCEEEEEECCEEEEEEHHHHEECCCCCCCEEEEEECCHHHE TINPDIQFYDVEQSKLNPFTGDDYNKINKSVKANLAKKIDQSTLKTNAQNRLISELSKIL EECCCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHE ILTNSMGWKLQYNGKTIESETELNQDLKL EEECCCCEEEEECCCEECCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA