Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146299660

Identifier: 146299660

GI number: 146299660

Start: 2196037

End: 2198355

Strand: Direct

Name: 146299660

Synonym: Fjoh_1900

Alternate gene names: NA

Gene position: 2196037-2198355 (Clockwise)

Preceding gene: 146299659

Following gene: 146299661

Centisome position: 36.02

GC content: 34.63

Gene sequence:

>2319_bases
ATGAACAAAAAACATAATCATATAAATAATCATTTTGCAAAGTATTTTGTACTGCTATCCCTGTTTTTTGTTTTTGGATG
CAGCAATACAAAATATCTTCCAGAAGGCGATTTGCTTTATACCGGCGGTTCTGTAAAAGTGAAAGATTCTATTATGAAAA
AGAAAGATAGAAAAGCACTGCAAACCGAGCTGGAAGGTCTTCTTCGTCCAAAACCAAACAAAACATTTTTAGGATTACGT
CCAAAATTATGGTTCTATAATATTGCAGGCGAACCAAAAAAACAAAAAGGATTTAGATACTGGCTTCGCACTAAGGTTGG
AGAAGAGCCCGTGCTTTTTAGTAAAGTAGATTTAGATTATAATGCATCGGTTTTAAGAAATTTTACTGAAAACCGTGGTT
TTTTTAAAACACGTGTAAGTGCTGATTCTACTGTTCGAAACAAAAGAGTTACAGCCGAATATACCGTTACGCCCAGAAAA
CAATACAAAATTAAAAGCGTTATTTTTCCCGATGATTCACTCGCAATGTCCAGAATTATAGGAAGATCAAGCCGAAGAAG
CCTGCTTAAAGTTGGAAATCCGTATGATCTGGATGTAATTAAATCCGAAAGAGAACGAATCGACGCCAGATTAAAAGAAA
AAGGTTATTACTATTTTAACCCAGATTATATTTTGGCAAAAGTAGACAGCAGTAAAGGCGATCACGAAGTCAATATTAGA
CTGGTAATAAAAGACGATACACCTGTAAAAGCACTTACAGCTTATAAAATTGATAAAATCTATGTATATCCCAATTATTC
GCTGAACAATGACAGCATGGTTTACAGGAAAAAAAATATTCAGCAGTATAAAGATTTTACAATTATAGATACTGCAGAGA
CTTTTAAGCCCAGAATTTATGACCGTACAATCTATTTTAAAAAAGGGGATTTGTATAATAGAAAAGATCACAATCTAACC
TTAAACCGATTTGTAAATTTGGGAACTTTCAGTTTTGTAAAAAATGAATTTAAACCGTCAGATAGTATTAAAAATGCTTT
GGATTCCTATTATTACCTCACACTTCTTCCTAAGAAATTTATTCGGGTTGAGGTTTTAGGAAAAACCAATTCAGCAAGTT
ATACAGGAACAGAAGTAAATGTAAACTGGAATAATCGTAATTTCTTTCGCGGCGCAGAATTGTTCACTTTCTCAATTTTT
GGAGGTGCCGATTTTCAGTTGGGCGGTGTAAACAAAGGAAAAAACATCTATAAACTTGGAGCTGAAACCAGTTTAACCTG
GCCAAGATTTATTACGCCTTTTAATATTGAAGGAAACAGCGAATATGTGCCAAGAACTAAAGCAACATTACGTTATGAAT
ATCAAAAACGTACACAATTGTATGCTTTAAATTCCTTTAATACCTCATTTGGATATTTATGGAAAGAAAACATTCGCAAA
GAACATCAATTGAATGTAATAGATGTAACTTATGTGAGTCCAAATCATGTTACGCCAGAATATTTAGAAGATATTCAGGA
AGATCCTGCTTTAGGAAAAGTAATTGAAAAACAATTGATTTTTGGTCCAACTTACAATTACACGTACACCAATACAATGC
AAAAACGCCGAAAAAATACCATTTATTTTAATGGTGAATTAGATCTGGCAGGAAACATAACAGGATTAGTAACCGGTGCA
GATTATCCAAATAATGTAAAAACGATATTTGATGTTCCGTTTAGCCAGTATGTCAAAATCAAATCAGATTTCAGACATTA
TTTAAAGTTAGGAAAAGAAAGTGAACTCGCCAGCCGATTAATCGTAGGAGCCGGATTTGCATCCGGAAATTCGAATACAC
TTCCTGCTTCAAAACAATTTGTGGTGGGGGGAACCAACAGTATTCGAGCTTTCAGAGCAAGAACTTTAGGGCCGGGAAGT
TATGTGATTCCGGAAACGACTACAAATATTAATTACACACCAGATCAATCAGCCGATTTAAAATTGGAATTCAATACAGA
ATATCGTGCAAAATTGTTTAGTATTGTGAGAGGCGCTGTATTTTTAGATGCAGGTAATATTTGGCTTTTACATGCCGATC
CGGACAAACCCGGTGCCGAAATTTCAAAAGATTTCATGAAAGAACTTGCCGTTGGAGCAGGAGTAGGTCTGCGTTTTGAT
TTATCATTCCTGATATTAAGAACTGATTTAGCCATGCCGCTTCGAAATCCTGCTTTGCCAGACGGACAAAGATGGGTAAT
TGATGATATTAATTTTGGAAGCAGTTCCTGGAGAAAAGACAATCTGATTTTGAATATCGCTATTGGATATCCGTTTTAA

Upstream 100 bases:

>100_bases
GAATTGATTCGAGAAGAAAAGCTTCGAAAAGAAAAGGAAAAACAGAAAAAAAAGGAAGACAAAGAGAAGGAGAAATTGCA
GGAAAATCAAATTGAAGGAA

Downstream 100 bases:

>100_bases
GTTTTTCGCCACGACTCGAGCGATAGCGAACAGGTGAAGCTATTCACGAATTCACACAATTTGCAGTTCGTTGAATTTTA
ATTAATCGAATTTTTATATT

Product: surface antigen (D15)

Products: NA

Alternate protein names: Outer Membrane Protein; Lipoprotein; Surface Membrane Protein; OMP85 Family Outer Membrane Protein; Surface Antigen Protein

Number of amino acids: Translated: 772; Mature: 772

Protein sequence:

>772_residues
MNKKHNHINNHFAKYFVLLSLFFVFGCSNTKYLPEGDLLYTGGSVKVKDSIMKKKDRKALQTELEGLLRPKPNKTFLGLR
PKLWFYNIAGEPKKQKGFRYWLRTKVGEEPVLFSKVDLDYNASVLRNFTENRGFFKTRVSADSTVRNKRVTAEYTVTPRK
QYKIKSVIFPDDSLAMSRIIGRSSRRSLLKVGNPYDLDVIKSERERIDARLKEKGYYYFNPDYILAKVDSSKGDHEVNIR
LVIKDDTPVKALTAYKIDKIYVYPNYSLNNDSMVYRKKNIQQYKDFTIIDTAETFKPRIYDRTIYFKKGDLYNRKDHNLT
LNRFVNLGTFSFVKNEFKPSDSIKNALDSYYYLTLLPKKFIRVEVLGKTNSASYTGTEVNVNWNNRNFFRGAELFTFSIF
GGADFQLGGVNKGKNIYKLGAETSLTWPRFITPFNIEGNSEYVPRTKATLRYEYQKRTQLYALNSFNTSFGYLWKENIRK
EHQLNVIDVTYVSPNHVTPEYLEDIQEDPALGKVIEKQLIFGPTYNYTYTNTMQKRRKNTIYFNGELDLAGNITGLVTGA
DYPNNVKTIFDVPFSQYVKIKSDFRHYLKLGKESELASRLIVGAGFASGNSNTLPASKQFVVGGTNSIRAFRARTLGPGS
YVIPETTTNINYTPDQSADLKLEFNTEYRAKLFSIVRGAVFLDAGNIWLLHADPDKPGAEISKDFMKELAVGAGVGLRFD
LSFLILRTDLAMPLRNPALPDGQRWVIDDINFGSSSWRKDNLILNIAIGYPF

Sequences:

>Translated_772_residues
MNKKHNHINNHFAKYFVLLSLFFVFGCSNTKYLPEGDLLYTGGSVKVKDSIMKKKDRKALQTELEGLLRPKPNKTFLGLR
PKLWFYNIAGEPKKQKGFRYWLRTKVGEEPVLFSKVDLDYNASVLRNFTENRGFFKTRVSADSTVRNKRVTAEYTVTPRK
QYKIKSVIFPDDSLAMSRIIGRSSRRSLLKVGNPYDLDVIKSERERIDARLKEKGYYYFNPDYILAKVDSSKGDHEVNIR
LVIKDDTPVKALTAYKIDKIYVYPNYSLNNDSMVYRKKNIQQYKDFTIIDTAETFKPRIYDRTIYFKKGDLYNRKDHNLT
LNRFVNLGTFSFVKNEFKPSDSIKNALDSYYYLTLLPKKFIRVEVLGKTNSASYTGTEVNVNWNNRNFFRGAELFTFSIF
GGADFQLGGVNKGKNIYKLGAETSLTWPRFITPFNIEGNSEYVPRTKATLRYEYQKRTQLYALNSFNTSFGYLWKENIRK
EHQLNVIDVTYVSPNHVTPEYLEDIQEDPALGKVIEKQLIFGPTYNYTYTNTMQKRRKNTIYFNGELDLAGNITGLVTGA
DYPNNVKTIFDVPFSQYVKIKSDFRHYLKLGKESELASRLIVGAGFASGNSNTLPASKQFVVGGTNSIRAFRARTLGPGS
YVIPETTTNINYTPDQSADLKLEFNTEYRAKLFSIVRGAVFLDAGNIWLLHADPDKPGAEISKDFMKELAVGAGVGLRFD
LSFLILRTDLAMPLRNPALPDGQRWVIDDINFGSSSWRKDNLILNIAIGYPF
>Mature_772_residues
MNKKHNHINNHFAKYFVLLSLFFVFGCSNTKYLPEGDLLYTGGSVKVKDSIMKKKDRKALQTELEGLLRPKPNKTFLGLR
PKLWFYNIAGEPKKQKGFRYWLRTKVGEEPVLFSKVDLDYNASVLRNFTENRGFFKTRVSADSTVRNKRVTAEYTVTPRK
QYKIKSVIFPDDSLAMSRIIGRSSRRSLLKVGNPYDLDVIKSERERIDARLKEKGYYYFNPDYILAKVDSSKGDHEVNIR
LVIKDDTPVKALTAYKIDKIYVYPNYSLNNDSMVYRKKNIQQYKDFTIIDTAETFKPRIYDRTIYFKKGDLYNRKDHNLT
LNRFVNLGTFSFVKNEFKPSDSIKNALDSYYYLTLLPKKFIRVEVLGKTNSASYTGTEVNVNWNNRNFFRGAELFTFSIF
GGADFQLGGVNKGKNIYKLGAETSLTWPRFITPFNIEGNSEYVPRTKATLRYEYQKRTQLYALNSFNTSFGYLWKENIRK
EHQLNVIDVTYVSPNHVTPEYLEDIQEDPALGKVIEKQLIFGPTYNYTYTNTMQKRRKNTIYFNGELDLAGNITGLVTGA
DYPNNVKTIFDVPFSQYVKIKSDFRHYLKLGKESELASRLIVGAGFASGNSNTLPASKQFVVGGTNSIRAFRARTLGPGS
YVIPETTTNINYTPDQSADLKLEFNTEYRAKLFSIVRGAVFLDAGNIWLLHADPDKPGAEISKDFMKELAVGAGVGLRFD
LSFLILRTDLAMPLRNPALPDGQRWVIDDINFGSSSWRKDNLILNIAIGYPF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88652; Mature: 88652

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKHNHINNHFAKYFVLLSLFFVFGCSNTKYLPEGDLLYTGGSVKVKDSIMKKKDRKAL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEHHHHHHHHHHHHH
QTELEGLLRPKPNKTFLGLRPKLWFYNIAGEPKKQKGFRYWLRTKVGEEPVLFSKVDLDY
HHHHHHHCCCCCCCEEEECCCCEEEEECCCCCCHHCCCEEEEECCCCCCCEEEEEECCCC
NASVLRNFTENRGFFKTRVSADSTVRNKRVTAEYTVTPRKQYKIKSVIFPDDSLAMSRII
CHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCHHHHHHHH
GRSSRRSLLKVGNPYDLDVIKSERERIDARLKEKGYYYFNPDYILAKVDSSKGDHEVNIR
CCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCCCEEEEEE
LVIKDDTPVKALTAYKIDKIYVYPNYSLNNDSMVYRKKNIQQYKDFTIIDTAETFKPRIY
EEEECCCCCEEEEEEEEEEEEEEECCCCCCCCEEEEHHCHHHHCCEEEEECHHHCCCEEE
DRTIYFKKGDLYNRKDHNLTLNRFVNLGTFSFVKNEFKPSDSIKNALDSYYYLTLLPKKF
EEEEEEECCCCCCCCCCCEEHHHEEECCCHHHHHCCCCCCHHHHHHHHCEEEEEECCCCE
IRVEVLGKTNSASYTGTEVNVNWNNRNFFRGAELFTFSIFGGADFQLGGVNKGKNIYKLG
EEEEEEECCCCCCCCCCEEEEEECCCCEECCCEEEEEEEECCCCEEECCCCCCCCEEEEC
AETSLTWPRFITPFNIEGNSEYVPRTKATLRYEYQKRTQLYALNSFNTSFGYLWKENIRK
CCCCCCCCCEECEEEECCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCHHHHHHCCC
EHQLNVIDVTYVSPNHVTPEYLEDIQEDPALGKVIEKQLIFGPTYNYTYTNTMQKRRKNT
CCCCEEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHEECCCCCCEECHHHHHHCCCE
IYFNGELDLAGNITGLVTGADYPNNVKTIFDVPFSQYVKIKSDFRHYLKLGKESELASRL
EEECCEEEECCCEEEEEECCCCCCCCCEEEECCHHHHEEEHHHHHHHHHCCCHHHHHHEE
IVGAGFASGNSNTLPASKQFVVGGTNSIRAFRARTLGPGSYVIPETTTNINYTPDQSADL
EEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCEECCCCCCCCEECCCCCCEE
KLEFNTEYRAKLFSIVRGAVFLDAGNIWLLHADPDKPGAEISKDFMKELAVGAGVGLRFD
EEEECCHHHHHHHHHHHCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEE
LSFLILRTDLAMPLRNPALPDGQRWVIDDINFGSSSWRKDNLILNIAIGYPF
EEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure
MNKKHNHINNHFAKYFVLLSLFFVFGCSNTKYLPEGDLLYTGGSVKVKDSIMKKKDRKAL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEHHHHHHHHHHHHH
QTELEGLLRPKPNKTFLGLRPKLWFYNIAGEPKKQKGFRYWLRTKVGEEPVLFSKVDLDY
HHHHHHHCCCCCCCEEEECCCCEEEEECCCCCCHHCCCEEEEECCCCCCCEEEEEECCCC
NASVLRNFTENRGFFKTRVSADSTVRNKRVTAEYTVTPRKQYKIKSVIFPDDSLAMSRII
CHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCHHHHHHHH
GRSSRRSLLKVGNPYDLDVIKSERERIDARLKEKGYYYFNPDYILAKVDSSKGDHEVNIR
CCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCCCEEEEEE
LVIKDDTPVKALTAYKIDKIYVYPNYSLNNDSMVYRKKNIQQYKDFTIIDTAETFKPRIY
EEEECCCCCEEEEEEEEEEEEEEECCCCCCCCEEEEHHCHHHHCCEEEEECHHHCCCEEE
DRTIYFKKGDLYNRKDHNLTLNRFVNLGTFSFVKNEFKPSDSIKNALDSYYYLTLLPKKF
EEEEEEECCCCCCCCCCCEEHHHEEECCCHHHHHCCCCCCHHHHHHHHCEEEEEECCCCE
IRVEVLGKTNSASYTGTEVNVNWNNRNFFRGAELFTFSIFGGADFQLGGVNKGKNIYKLG
EEEEEEECCCCCCCCCCEEEEEECCCCEECCCEEEEEEEECCCCEEECCCCCCCCEEEEC
AETSLTWPRFITPFNIEGNSEYVPRTKATLRYEYQKRTQLYALNSFNTSFGYLWKENIRK
CCCCCCCCCEECEEEECCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCHHHHHHCCC
EHQLNVIDVTYVSPNHVTPEYLEDIQEDPALGKVIEKQLIFGPTYNYTYTNTMQKRRKNT
CCCCEEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHEECCCCCCEECHHHHHHCCCE
IYFNGELDLAGNITGLVTGADYPNNVKTIFDVPFSQYVKIKSDFRHYLKLGKESELASRL
EEECCEEEECCCEEEEEECCCCCCCCCEEEECCHHHHEEEHHHHHHHHHCCCHHHHHHEE
IVGAGFASGNSNTLPASKQFVVGGTNSIRAFRARTLGPGSYVIPETTTNINYTPDQSADL
EEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCEECCCCCCCCEECCCCCCEE
KLEFNTEYRAKLFSIVRGAVFLDAGNIWLLHADPDKPGAEISKDFMKELAVGAGVGLRFD
EEEECCHHHHHHHHHHHCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEE
LSFLILRTDLAMPLRNPALPDGQRWVIDDINFGSSSWRKDNLILNIAIGYPF
EEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA