| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146299556
Identifier: 146299556
GI number: 146299556
Start: 2075428
End: 2077287
Strand: Direct
Name: 146299556
Synonym: Fjoh_1796
Alternate gene names: NA
Gene position: 2075428-2077287 (Clockwise)
Preceding gene: 146299555
Following gene: 146299557
Centisome position: 34.04
GC content: 39.62
Gene sequence:
>1860_bases ATGGCATTACAGACAATAACCACCATTAAAGTAGGCGAAATCAGGATTACCAATTTCAATAAATTAAAAATTTTTCAAAC CATTCACGATCACCATACTTTTTCATTTGAAGTAAGACAGGATTTATTAGTTGACGAGTTTAAAAGTGTGATGCCTTTTT CCCAGAAACTTTACGGCGAGAAAATCAGCATCGAAATAAAACCTATAGACGGTCTGGAGGATCTTATGATTGGCGCAGAT CTTAAACATTATACCATGCAGTTCTATGGTGTGGTAACCAAAGTAAAACTGAAGAAATCCCGTGTAAAAGATATAGAAGA AATTATCGTAATAAAAGGGAAAAGCTCCACGATAGCACTCGAAAACGGTCCCGAATGCAATTCTTTTACCAATATGACCC TGAGCGATATTGTAACCAAAGTAAAATCAGGCTGTGATATTGATATGGATGTAAGGCCGTTTTATTTAGAAAACCTGCCT TATACGGTGCAGTATAACGAAAGTAATTTCTCTTTTCTAAACCGTCTGGCAAAAAGAAACGGGCACTGGCTGTATTATAA CGGACGCACCACTGTTTTTGGAAGTCCAGGCGGTGTGGGCGGACAGCCCCAGTTAGTTTACGGGGTAAACATGCAGGATT TTGATTACACCATTAAACTCATGCCGGCAATGTTTAAAATAATAGAAAATGACAACCGCGACGGCAGTTACAGAACCGAT GAAACCTTAAAATACAGAAGAGAAGCCGACGGTTTTCAGCAGAATTTTTTAAATAAATCCAATGAGTTCTTTAATAAAGA AACCATAATACAGCTTAACCAGAATCCTGCTGGAGGATCTGCACGACGTTCCTCAGAAGAATATGCGAAAAACAAAATGC GCGCTATTCTAAGCCGTTTAACAGAAGTAAAAGCCTCCAGCGAAGTTCCGGGAATTACCATAGGAAACGAAGTAAGGATA GCTGGTGTCGACGTACAGCTGGAAAGCTCCTACCGTGTAACACAGATAACCCACATTTGCGACGACGGAGGCGGTTATGA AAATTATTTTACAGCCGTAAACTTTAACGGTTCTGTATTCTCTCCCCAGACCGATCCTGATTTAGTGCCGTTCTGCAGAA GCCAGACCGCCATTGTAACGGGCAATGCAGACCCGGACGGACTCAGCGGCATACAGGTGCAGATGCCGTGGCAGGAAGCC AAAGGCGAAACCACTCCTTATATTCCCTTTGTGCAGAAATACGGAGGCGATGCCAGAGGAAGCCATACGCTGCCGGAAAT TGGCGATACAGTTTTTGTAGATTTTCAGTGTAATAATGCCGAACTGCCTATTGCAATGGGAACCATAACCAGCAGAAAAG AAAAAAGCGGTTTCAGTACGCCAAATAATGATTTAAAGGTATTTAGAACCCGAAGCGGTAATAAGGCTATTCTTAATGAT GAAACGGGTGATATTACCATTGAAAGCGAAAAAGGACAAGCTCTTGTTGTAGTATATGGTGATGGAAATATAAAACTAAA AGCACCTAAAAATATTGAACTGGAAGCTGGTGAGGATGTTATTATAACAGCAGGAAAAAATATAAAAATTGATGCTGGCC AAAATATTTCTGAAACAGCGGGGGTCAATAAAACTTTAGGGGTCGGAGGAATAATGAATACAAAGGTTAACGGAGATAAA ATACTTTATGTGGTTGGTGGATACCATGAACAAATTGACGGAGATTTTCATTCTCATACTGAAAAAGAAAGACAAGAAAC AGCTTTAGAGGGTATTCAAAACAATACTGAGAAAGACATTCAAAAACATGCTAAAAATGATATCCAAAACAATAGTGGTG AAAACACTACCAATAATTAA
Upstream 100 bases:
>100_bases GGTTACCGAAATTCTAATTTCTTCAAATGAAGTAAAAATAGGAAATACTCTTTTTGAAAATAACTGGAAAAATTCATAGA CATCTTAACTAACAACGACC
Downstream 100 bases:
>100_bases ATCATGAGGACAAGATTTGTAAAAGGTACGATCACAAAAACTACCGGTGGGAATTATAAGATGTATAGTAATGGTAATAT TATTAATAATGCAGGTGGAT
Product: Rhs element Vgr protein
Products: NA
Alternate protein names: Rhs Element Vgr Protein Family Protein; Rhs Family Protein; LOW QUALITY PROTEIN Rhs Element Vgr Protein Family Protein; Phage Protein D; Phosphoserine Phosphatase SerB
Number of amino acids: Translated: 619; Mature: 618
Protein sequence:
>619_residues MALQTITTIKVGEIRITNFNKLKIFQTIHDHHTFSFEVRQDLLVDEFKSVMPFSQKLYGEKISIEIKPIDGLEDLMIGAD LKHYTMQFYGVVTKVKLKKSRVKDIEEIIVIKGKSSTIALENGPECNSFTNMTLSDIVTKVKSGCDIDMDVRPFYLENLP YTVQYNESNFSFLNRLAKRNGHWLYYNGRTTVFGSPGGVGGQPQLVYGVNMQDFDYTIKLMPAMFKIIENDNRDGSYRTD ETLKYRREADGFQQNFLNKSNEFFNKETIIQLNQNPAGGSARRSSEEYAKNKMRAILSRLTEVKASSEVPGITIGNEVRI AGVDVQLESSYRVTQITHICDDGGGYENYFTAVNFNGSVFSPQTDPDLVPFCRSQTAIVTGNADPDGLSGIQVQMPWQEA KGETTPYIPFVQKYGGDARGSHTLPEIGDTVFVDFQCNNAELPIAMGTITSRKEKSGFSTPNNDLKVFRTRSGNKAILND ETGDITIESEKGQALVVVYGDGNIKLKAPKNIELEAGEDVIITAGKNIKIDAGQNISETAGVNKTLGVGGIMNTKVNGDK ILYVVGGYHEQIDGDFHSHTEKERQETALEGIQNNTEKDIQKHAKNDIQNNSGENTTNN
Sequences:
>Translated_619_residues MALQTITTIKVGEIRITNFNKLKIFQTIHDHHTFSFEVRQDLLVDEFKSVMPFSQKLYGEKISIEIKPIDGLEDLMIGAD LKHYTMQFYGVVTKVKLKKSRVKDIEEIIVIKGKSSTIALENGPECNSFTNMTLSDIVTKVKSGCDIDMDVRPFYLENLP YTVQYNESNFSFLNRLAKRNGHWLYYNGRTTVFGSPGGVGGQPQLVYGVNMQDFDYTIKLMPAMFKIIENDNRDGSYRTD ETLKYRREADGFQQNFLNKSNEFFNKETIIQLNQNPAGGSARRSSEEYAKNKMRAILSRLTEVKASSEVPGITIGNEVRI AGVDVQLESSYRVTQITHICDDGGGYENYFTAVNFNGSVFSPQTDPDLVPFCRSQTAIVTGNADPDGLSGIQVQMPWQEA KGETTPYIPFVQKYGGDARGSHTLPEIGDTVFVDFQCNNAELPIAMGTITSRKEKSGFSTPNNDLKVFRTRSGNKAILND ETGDITIESEKGQALVVVYGDGNIKLKAPKNIELEAGEDVIITAGKNIKIDAGQNISETAGVNKTLGVGGIMNTKVNGDK ILYVVGGYHEQIDGDFHSHTEKERQETALEGIQNNTEKDIQKHAKNDIQNNSGENTTNN >Mature_618_residues ALQTITTIKVGEIRITNFNKLKIFQTIHDHHTFSFEVRQDLLVDEFKSVMPFSQKLYGEKISIEIKPIDGLEDLMIGADL KHYTMQFYGVVTKVKLKKSRVKDIEEIIVIKGKSSTIALENGPECNSFTNMTLSDIVTKVKSGCDIDMDVRPFYLENLPY TVQYNESNFSFLNRLAKRNGHWLYYNGRTTVFGSPGGVGGQPQLVYGVNMQDFDYTIKLMPAMFKIIENDNRDGSYRTDE TLKYRREADGFQQNFLNKSNEFFNKETIIQLNQNPAGGSARRSSEEYAKNKMRAILSRLTEVKASSEVPGITIGNEVRIA GVDVQLESSYRVTQITHICDDGGGYENYFTAVNFNGSVFSPQTDPDLVPFCRSQTAIVTGNADPDGLSGIQVQMPWQEAK GETTPYIPFVQKYGGDARGSHTLPEIGDTVFVDFQCNNAELPIAMGTITSRKEKSGFSTPNNDLKVFRTRSGNKAILNDE TGDITIESEKGQALVVVYGDGNIKLKAPKNIELEAGEDVIITAGKNIKIDAGQNISETAGVNKTLGVGGIMNTKVNGDKI LYVVGGYHEQIDGDFHSHTEKERQETALEGIQNNTEKDIQKHAKNDIQNNSGENTTNN
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68895; Mature: 68764
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALQTITTIKVGEIRITNFNKLKIFQTIHDHHTFSFEVRQDLLVDEFKSVMPFSQKLYGE CCCEEEEEEEECEEEEECCCEEEEEEEHHCCCEEEEHHHHHHHHHHHHHHCCHHHHHCCC KISIEIKPIDGLEDLMIGADLKHYTMQFYGVVTKVKLKKSRVKDIEEIIVIKGKSSTIAL EEEEEEECCCCHHHHHCCCCHHHHHHHHHHEEEEEEEHHHHHCCCEEEEEEECCCCEEEE ENGPECNSFTNMTLSDIVTKVKSGCDIDMDVRPFYLENLPYTVQYNESNFSFLNRLAKRN CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCCCHHHHHHHHHCC GHWLYYNGRTTVFGSPGGVGGQPQLVYGVNMQDFDYTIKLMPAMFKIIENDNRDGSYRTD CCEEEECCEEEEEECCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCC ETLKYRREADGFQQNFLNKSNEFFNKETIIQLNQNPAGGSARRSSEEYAKNKMRAILSRL HHHHHHHHCCHHHHHHHCCCHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH TEVKASSEVPGITIGNEVRIAGVDVQLESSYRVTQITHICDDGGGYENYFTAVNFNGSVF HHHHCCCCCCCEEECCEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCEEEEEECCCCEE SPQTDPDLVPFCRSQTAIVTGNADPDGLSGIQVQMPWQEAKGETTPYIPFVQKYGGDARG CCCCCCCCHHHCCCCEEEEECCCCCCCCCCEEEEECHHHCCCCCCCCCHHHHHCCCCCCC SHTLPEIGDTVFVDFQCNNAELPIAMGTITSRKEKSGFSTPNNDLKVFRTRSGNKAILND CCCCCCCCCEEEEEEEECCCCCCEEECCCCCCHHHCCCCCCCCCEEEEEECCCCEEEECC ETGDITIESEKGQALVVVYGDGNIKLKAPKNIELEAGEDVIITAGKNIKIDAGQNISETA CCCCEEEECCCCCEEEEEECCCCEEEECCCCEEEECCCEEEEECCCEEEEECCCCCHHHC GVNKTLGVGGIMNTKVNGDKILYVVGGYHEQIDGDFHSHTEKERQETALEGIQNNTEKDI CCCCCCCCCCEEECEECCCEEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHH QKHAKNDIQNNSGENTTNN HHHHHHHCCCCCCCCCCCC >Mature Secondary Structure ALQTITTIKVGEIRITNFNKLKIFQTIHDHHTFSFEVRQDLLVDEFKSVMPFSQKLYGE CCEEEEEEEECEEEEECCCEEEEEEEHHCCCEEEEHHHHHHHHHHHHHHCCHHHHHCCC KISIEIKPIDGLEDLMIGADLKHYTMQFYGVVTKVKLKKSRVKDIEEIIVIKGKSSTIAL EEEEEEECCCCHHHHHCCCCHHHHHHHHHHEEEEEEEHHHHHCCCEEEEEEECCCCEEEE ENGPECNSFTNMTLSDIVTKVKSGCDIDMDVRPFYLENLPYTVQYNESNFSFLNRLAKRN CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCCCHHHHHHHHHCC GHWLYYNGRTTVFGSPGGVGGQPQLVYGVNMQDFDYTIKLMPAMFKIIENDNRDGSYRTD CCEEEECCEEEEEECCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCC ETLKYRREADGFQQNFLNKSNEFFNKETIIQLNQNPAGGSARRSSEEYAKNKMRAILSRL HHHHHHHHCCHHHHHHHCCCHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH TEVKASSEVPGITIGNEVRIAGVDVQLESSYRVTQITHICDDGGGYENYFTAVNFNGSVF HHHHCCCCCCCEEECCEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCEEEEEECCCCEE SPQTDPDLVPFCRSQTAIVTGNADPDGLSGIQVQMPWQEAKGETTPYIPFVQKYGGDARG CCCCCCCCHHHCCCCEEEEECCCCCCCCCCEEEEECHHHCCCCCCCCCHHHHHCCCCCCC SHTLPEIGDTVFVDFQCNNAELPIAMGTITSRKEKSGFSTPNNDLKVFRTRSGNKAILND CCCCCCCCCEEEEEEEECCCCCCEEECCCCCCHHHCCCCCCCCCEEEEEECCCCEEEECC ETGDITIESEKGQALVVVYGDGNIKLKAPKNIELEAGEDVIITAGKNIKIDAGQNISETA CCCCEEEECCCCCEEEEEECCCCEEEECCCCEEEECCCEEEEECCCEEEEECCCCCHHHC GVNKTLGVGGIMNTKVNGDKILYVVGGYHEQIDGDFHSHTEKERQETALEGIQNNTEKDI CCCCCCCCCCEEECEECCCEEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHH QKHAKNDIQNNSGENTTNN HHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA