| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299557
Identifier: 146299557
GI number: 146299557
Start: 2077348
End: 2078580
Strand: Direct
Name: 146299557
Synonym: Fjoh_1797
Alternate gene names: NA
Gene position: 2077348-2078580 (Clockwise)
Preceding gene: 146299556
Following gene: 146299558
Centisome position: 34.07
GC content: 30.17
Gene sequence:
>1233_bases ATGTATAGTAATGGTAATATTATTAATAATGCAGGTGGATTTATTAGGGAAACTGCAGATAATCAAATTACATACGGAAA TCCTGAAGATGCTCCAAAGAAAAAACTAATAAATTCTGCATTACTTTATGAAACAGACGGACATTATAGTACAGTATATT TAGTATGTTTAATGCTGGGAATGAATGAAGAAGATGCTGAAGAATTAGCAATTGCTACTGAATCGCCAGACACTACAATT CATAGTGAAATAGATTTTGAATTAAACGACACTTGGGCGGATCCAGATTATCAAGGTTCTGTGCATTCTTTAACAGGAGG CTTTCATGGAATTGAAGAATTTATGACGGCAGTAAAAATTCTATGGTTAAAAATTAATGATAAAAATCGGGAAGATTGTA TTCGTCAACTTGGAGAATTATTGCATAGGTTTGGTGATACCTATGCGCATACAAAATTAGATAATATCAAACCGAGTAAT TTAACTGCTTATAATTTGCATTTAGGGGATGAAAACTTACCGAAAGCAATTGCCAGCTGGAAAGGTCAAGGAGGAAAATC ATTGGCTAAAGATGTAGAACCGTGGATTGTTAGAATTAACGAATTCACCAAAAAATATGGATATTCTTTTTTAACAAATG AAAATTATCAAAGAGAAGCTTTTAATGGAAAAACCTTAACCGAAGAATTTCAAGAAATCTATTTGCTTAAATCAACAGAT AAATTTAAAATGTATGGTGGTGGATATTTTACAACAGAGCATTTAACTATAGATAGTGGTTATCCAGATATGATTTACAT AAGACCTGACTGGTATTTAAACTATGTGAAGAATTTAGCATGGCTGCTTGCCCTAAAATTTAAATTAGATCTACAAAAAA TTGACATAAGCGTTTTTGAAAGAATGACAAAATTTGCTGCAGAAAATAAATGTTCTTTAAAAGGAATAATTGATTATGAG ATTGCTAAAAAAAGAGGAAAAAGAGAGTTTTTTATACCAGTTTTTTATTCTAGTCCTACAAGATTAGCAGCGTCAGGGGA TTCTATTGCTTTTACAGATTATTTACAAAAAGCAAAAGAAGCTAAGGAATTTACAATTAAATATATGATGTACGAAGGAA ACTATCCCATACCTTTTGATGGAGAAGAAATAACCAATTTATTAAATCTTAAATTCAGCATAAAAACTGAAAATTATTTT TACTATACTGACGCATATAAACTGAAATTTTAA
Upstream 100 bases:
>100_bases TATCCAAAACAATAGTGGTGAAAACACTACCAATAATTAAATCATGAGGACAAGATTTGTAAAAGGTACGATCACAAAAA CTACCGGTGGGAATTATAAG
Downstream 100 bases:
>100_bases TGAAAAAAATAGCTTTAATTAGTTTTTTAATGTTTTTTGTACATTTTTTTATTCTGATTGTTCTTTTTACAAGATTAAAC GCATACATTCCAAAACATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MYSNGNIINNAGGFIRETADNQITYGNPEDAPKKKLINSALLYETDGHYSTVYLVCLMLGMNEEDAEELAIATESPDTTI HSEIDFELNDTWADPDYQGSVHSLTGGFHGIEEFMTAVKILWLKINDKNREDCIRQLGELLHRFGDTYAHTKLDNIKPSN LTAYNLHLGDENLPKAIASWKGQGGKSLAKDVEPWIVRINEFTKKYGYSFLTNENYQREAFNGKTLTEEFQEIYLLKSTD KFKMYGGGYFTTEHLTIDSGYPDMIYIRPDWYLNYVKNLAWLLALKFKLDLQKIDISVFERMTKFAAENKCSLKGIIDYE IAKKRGKREFFIPVFYSSPTRLAASGDSIAFTDYLQKAKEAKEFTIKYMMYEGNYPIPFDGEEITNLLNLKFSIKTENYF YYTDAYKLKF
Sequences:
>Translated_410_residues MYSNGNIINNAGGFIRETADNQITYGNPEDAPKKKLINSALLYETDGHYSTVYLVCLMLGMNEEDAEELAIATESPDTTI HSEIDFELNDTWADPDYQGSVHSLTGGFHGIEEFMTAVKILWLKINDKNREDCIRQLGELLHRFGDTYAHTKLDNIKPSN LTAYNLHLGDENLPKAIASWKGQGGKSLAKDVEPWIVRINEFTKKYGYSFLTNENYQREAFNGKTLTEEFQEIYLLKSTD KFKMYGGGYFTTEHLTIDSGYPDMIYIRPDWYLNYVKNLAWLLALKFKLDLQKIDISVFERMTKFAAENKCSLKGIIDYE IAKKRGKREFFIPVFYSSPTRLAASGDSIAFTDYLQKAKEAKEFTIKYMMYEGNYPIPFDGEEITNLLNLKFSIKTENYF YYTDAYKLKF >Mature_410_residues MYSNGNIINNAGGFIRETADNQITYGNPEDAPKKKLINSALLYETDGHYSTVYLVCLMLGMNEEDAEELAIATESPDTTI HSEIDFELNDTWADPDYQGSVHSLTGGFHGIEEFMTAVKILWLKINDKNREDCIRQLGELLHRFGDTYAHTKLDNIKPSN LTAYNLHLGDENLPKAIASWKGQGGKSLAKDVEPWIVRINEFTKKYGYSFLTNENYQREAFNGKTLTEEFQEIYLLKSTD KFKMYGGGYFTTEHLTIDSGYPDMIYIRPDWYLNYVKNLAWLLALKFKLDLQKIDISVFERMTKFAAENKCSLKGIIDYE IAKKRGKREFFIPVFYSSPTRLAASGDSIAFTDYLQKAKEAKEFTIKYMMYEGNYPIPFDGEEITNLLNLKFSIKTENYF YYTDAYKLKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47291; Mature: 47291
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSNGNIINNAGGFIRETADNQITYGNPEDAPKKKLINSALLYETDGHYSTVYLVCLMLG CCCCCCEEECCCCCEEECCCCCEECCCCCCCHHHHHHHHHEEEECCCCHHHHHHHHHHHC MNEEDAEELAIATESPDTTIHSEIDFELNDTWADPDYQGSVHSLTGGFHGIEEFMTAVKI CCCCCHHHEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHEE LWLKINDKNREDCIRQLGELLHRFGDTYAHTKLDNIKPSNLTAYNLHLGDENLPKAIASW EEEEECCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHC KGQGGKSLAKDVEPWIVRINEFTKKYGYSFLTNENYQREAFNGKTLTEEFQEIYLLKSTD CCCCCCHHHHCCCHHEEHHHHHHHHHCCEEECCCCCCHHCCCCCHHHHHHHHEEEEECCC KFKMYGGGYFTTEHLTIDSGYPDMIYIRPDWYLNYVKNLAWLLALKFKLDLQKIDISVFE CEEEECCCEEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHEECHHHHHHHHHH RMTKFAAENKCSLKGIIDYEIAKKRGKREFFIPVFYSSPTRLAASGDSIAFTDYLQKAKE HHHHHHHCCCCCEEEEEEHHHHHHCCCCEEEEEEEECCCCEEEECCCCEEHHHHHHHHHH AKEFTIKYMMYEGNYPIPFDGEEITNLLNLKFSIKTENYFYYTDAYKLKF HHEEEEEEEEEECCCCCCCCHHHHHHHHEEEEEEEECCEEEEEEEEEECC >Mature Secondary Structure MYSNGNIINNAGGFIRETADNQITYGNPEDAPKKKLINSALLYETDGHYSTVYLVCLMLG CCCCCCEEECCCCCEEECCCCCEECCCCCCCHHHHHHHHHEEEECCCCHHHHHHHHHHHC MNEEDAEELAIATESPDTTIHSEIDFELNDTWADPDYQGSVHSLTGGFHGIEEFMTAVKI CCCCCHHHEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHEE LWLKINDKNREDCIRQLGELLHRFGDTYAHTKLDNIKPSNLTAYNLHLGDENLPKAIASW EEEEECCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHC KGQGGKSLAKDVEPWIVRINEFTKKYGYSFLTNENYQREAFNGKTLTEEFQEIYLLKSTD CCCCCCHHHHCCCHHEEHHHHHHHHHCCEEECCCCCCHHCCCCCHHHHHHHHEEEEECCC KFKMYGGGYFTTEHLTIDSGYPDMIYIRPDWYLNYVKNLAWLLALKFKLDLQKIDISVFE CEEEECCCEEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHEECHHHHHHHHHH RMTKFAAENKCSLKGIIDYEIAKKRGKREFFIPVFYSSPTRLAASGDSIAFTDYLQKAKE HHHHHHHCCCCCEEEEEEHHHHHHCCCCEEEEEEEECCCCEEEECCCCEEHHHHHHHHHH AKEFTIKYMMYEGNYPIPFDGEEITNLLNLKFSIKTENYFYYTDAYKLKF HHEEEEEEEEEECCCCCCCCHHHHHHHHEEEEEEEECCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA