| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is phnB [H]
Identifier: 146299471
GI number: 146299471
Start: 1978942
End: 1979376
Strand: Direct
Name: phnB [H]
Synonym: Fjoh_1711
Alternate gene names: 146299471
Gene position: 1978942-1979376 (Clockwise)
Preceding gene: 146299470
Following gene: 146299472
Centisome position: 32.46
GC content: 35.4
Gene sequence:
>435_bases ATGGCAGCAATTAATCCTTATTTAATGTTTAACGGAACCTGCGAAGAAGCATTTCTGTTTTACAAATCAGTTTTTGGAGG AGAATTTCCTTATATCGGAAAATATAAAGATGCACCGGCAGAAGAAGGAGAAAAGCTTTCAGAAGAAGCTTTAAACCGAA TTATGCACGTTTCACTTCCAATTGGCAATACCATTTTAATGGGAAGTGACAGTCATCCAAGATATGGAGATGTTGGTTTT GGAGATAATTTTTCCATTTCGATTAATACAGAAAGTACAGATGAAGCTGACAGAATTTTCAACGGACTTTCTGCTGGAGG AAAAGTAGAAATGCCTATGAATAAAACTTTTTGGGGTGCTTATTTTGGAATGTTCAAAGACAAATTTGGAGTAAACTGGA TGGTAAACTTCGATGAGAACCAACCAAACAAATAA
Upstream 100 bases:
>100_bases AAGGTCTGGAAGTTGTAAAACAATTATCAGAAGAAAAGGAATAGAAAAGAGAAGGCATTAACAATTTATAATTTACAATT AACAATTAACAAAAAATATC
Downstream 100 bases:
>100_bases TAAAAAAGTTATGTTATTATAATAGAAGAGCATAATTGTTAAATTACTTAAAAAAGCGCATGAATATGCGCTTTTTCTTT GCAAAAAAAACAAGGATTAT
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MAAINPYLMFNGTCEEAFLFYKSVFGGEFPYIGKYKDAPAEEGEKLSEEALNRIMHVSLPIGNTILMGSDSHPRYGDVGF GDNFSISINTESTDEADRIFNGLSAGGKVEMPMNKTFWGAYFGMFKDKFGVNWMVNFDENQPNK
Sequences:
>Translated_144_residues MAAINPYLMFNGTCEEAFLFYKSVFGGEFPYIGKYKDAPAEEGEKLSEEALNRIMHVSLPIGNTILMGSDSHPRYGDVGF GDNFSISINTESTDEADRIFNGLSAGGKVEMPMNKTFWGAYFGMFKDKFGVNWMVNFDENQPNK >Mature_143_residues AAINPYLMFNGTCEEAFLFYKSVFGGEFPYIGKYKDAPAEEGEKLSEEALNRIMHVSLPIGNTILMGSDSHPRYGDVGFG DNFSISINTESTDEADRIFNGLSAGGKVEMPMNKTFWGAYFGMFKDKFGVNWMVNFDENQPNK
Specific function: Unknown
COG id: COG2764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790546, Length=147, Percent_Identity=31.2925170068027, Blast_Score=88, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16113; Mature: 15982
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAINPYLMFNGTCEEAFLFYKSVFGGEFPYIGKYKDAPAEEGEKLSEEALNRIMHVSLP CCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECC IGNTILMGSDSHPRYGDVGFGDNFSISINTESTDEADRIFNGLSAGGKVEMPMNKTFWGA CCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEECCCCCCHHHH YFGMFKDKFGVNWMVNFDENQPNK HHHHHHHCCCCEEEEEECCCCCCC >Mature Secondary Structure AAINPYLMFNGTCEEAFLFYKSVFGGEFPYIGKYKDAPAEEGEKLSEEALNRIMHVSLP CCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECC IGNTILMGSDSHPRYGDVGFGDNFSISINTESTDEADRIFNGLSAGGKVEMPMNKTFWGA CCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEECCCCCCHHHH YFGMFKDKFGVNWMVNFDENQPNK HHHHHHHCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 7610040; 9278503 [H]