Click here to switch to the map view.

The map label for this gene is serB [H]

Identifier: 146299472

GI number: 146299472

Start: 1979534

End: 1980766

Strand: Direct

Name: serB [H]

Synonym: Fjoh_1712

Alternate gene names: 146299472

Gene position: 1979534-1980766 (Clockwise)

Preceding gene: 146299471

Following gene: 146299474

Centisome position: 32.47

GC content: 35.85

Gene sequence:

>1233_bases
ATGGCAGCAGAGGAAAATAAAGAAATTATTTTATTAAAAGTTTCTGGACACGATAAAATAGGGGTTACGGCAGGTTTAAC
AGCTGTATTGGCAGCTTACGATGCTAATATTTTAGATATTGGCCAAGCCGATATTCATGACACACTTTCTTTAGGTATCT
TATTCGAAATTGCTGCAGGTTCTTCGTCTGCGCCGGTTTTAAAAGACTTATTATTTAAAGCCTATGAACTGGAAATTAAA
GTTAAGTTTATTCCAATTTCTATAGAAGATTACGAAAAGTGGGTAAAATCGCAGTCTAAGCAGCGCTACATCATCAATAT
TTTAGGTGAAAAGCTGGCAGCGTCACAATTGGCAGCTGTTACTAAAATAATGTCAGATCAAAACCTAAATATCGACTCCA
TTATACGTTTAACCGGAAGAACTTCAATTGTCGAAAAAGAACAATATCCGCGTTCTTGTATTCAGTTGTCAGTGACAGGA
GAAATTGTAAATAAAATTGTCATGACGGCAAGTTTTATGGAGATTTCAAGAACTTTAAATGTTGACATTTCTTTTCAGGA
AGATAATATTTACAGAAGAAACCGCCGTTTGGTCTGCTTCGACATGGATTCAACTTTAATCCAAACTGAAGTTATCGACG
AATTGGCAGAACTAAACGGAGTAGGCGATCAGGTTCGTGCGATAACAGAATCGGCTATGAATGGTGAAATTGATTTTAAC
GAAAGCTTTAAAAAACGTATGGCTTTGTTAGAAGGTTTAAGCGAAGAAGTGCTGCAAAATGTTGCCGTTAATTTACCAAT
AACACAAGGCGCACATCGTTTAATGAAAGCCTTGAAATACTACGGATATAAAACTGCAATCCTTTCAGGAGGTTTTACCT
ATTTTGGAGAATACCTTCAAAAAGAACTTGGAATTGATTATGTTCACGCTAATCAATTAGAAATTAAAGACGGTAAATTA
ACAGGTAAGTATCTGGGCGATATCGTAGACGGACAAAAGAAAGCCGAATTTTTAAAAGCAATTGCTGAAAAAGAAGGAAT
CCATATCAACCAGACTATTGCAGTTGGAGATGGTGCAAACGATTTACCAATGCTAAACCTAGCTGGTTTAGGAATCGCTT
TCCATGCTAAACCAAAAGTTAAAGAAAGTGCTTCAACTTCAATCTCTAGTTTAGGACTTGACGGTGTTTTATATCTTTTA
GGATATCACGACAGATATATCGATATGATGTAA

Upstream 100 bases:

>100_bases
GCATGAATATGCGCTTTTTCTTTGCAAAAAAAACAAGGATTATTCTTTTTTATCACCAAGAGATTGCCGATTTTTGTCGC
TTTCAAATCAATAAGATAAA

Downstream 100 bases:

>100_bases
CCCAAATGTTACAATAGAATTTTTAATAAATCAATTGCCTCCTGCTTTAGCTGGAGGTATACGAGCTGGCAAGGCTAAGG
CTTTAGCCAAATCACTCCGC

Product: phosphoserine phosphatase SerB

Products: NA

Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MAAEENKEIILLKVSGHDKIGVTAGLTAVLAAYDANILDIGQADIHDTLSLGILFEIAAGSSSAPVLKDLLFKAYELEIK
VKFIPISIEDYEKWVKSQSKQRYIINILGEKLAASQLAAVTKIMSDQNLNIDSIIRLTGRTSIVEKEQYPRSCIQLSVTG
EIVNKIVMTASFMEISRTLNVDISFQEDNIYRRNRRLVCFDMDSTLIQTEVIDELAELNGVGDQVRAITESAMNGEIDFN
ESFKKRMALLEGLSEEVLQNVAVNLPITQGAHRLMKALKYYGYKTAILSGGFTYFGEYLQKELGIDYVHANQLEIKDGKL
TGKYLGDIVDGQKKAEFLKAIAEKEGIHINQTIAVGDGANDLPMLNLAGLGIAFHAKPKVKESASTSISSLGLDGVLYLL
GYHDRYIDMM

Sequences:

>Translated_410_residues
MAAEENKEIILLKVSGHDKIGVTAGLTAVLAAYDANILDIGQADIHDTLSLGILFEIAAGSSSAPVLKDLLFKAYELEIK
VKFIPISIEDYEKWVKSQSKQRYIINILGEKLAASQLAAVTKIMSDQNLNIDSIIRLTGRTSIVEKEQYPRSCIQLSVTG
EIVNKIVMTASFMEISRTLNVDISFQEDNIYRRNRRLVCFDMDSTLIQTEVIDELAELNGVGDQVRAITESAMNGEIDFN
ESFKKRMALLEGLSEEVLQNVAVNLPITQGAHRLMKALKYYGYKTAILSGGFTYFGEYLQKELGIDYVHANQLEIKDGKL
TGKYLGDIVDGQKKAEFLKAIAEKEGIHINQTIAVGDGANDLPMLNLAGLGIAFHAKPKVKESASTSISSLGLDGVLYLL
GYHDRYIDMM
>Mature_409_residues
AAEENKEIILLKVSGHDKIGVTAGLTAVLAAYDANILDIGQADIHDTLSLGILFEIAAGSSSAPVLKDLLFKAYELEIKV
KFIPISIEDYEKWVKSQSKQRYIINILGEKLAASQLAAVTKIMSDQNLNIDSIIRLTGRTSIVEKEQYPRSCIQLSVTGE
IVNKIVMTASFMEISRTLNVDISFQEDNIYRRNRRLVCFDMDSTLIQTEVIDELAELNGVGDQVRAITESAMNGEIDFNE
SFKKRMALLEGLSEEVLQNVAVNLPITQGAHRLMKALKYYGYKTAILSGGFTYFGEYLQKELGIDYVHANQLEIKDGKLT
GKYLGDIVDGQKKAEFLKAIAEKEGIHINQTIAVGDGANDLPMLNLAGLGIAFHAKPKVKESASTSISSLGLDGVLYLLG
YHDRYIDMM

Specific function: Unknown

COG id: COG0560

COG function: function code E; Phosphoserine phosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the serB family [H]

Homologues:

Organism=Homo sapiens, GI46249388, Length=205, Percent_Identity=32.1951219512195, Blast_Score=92, Evalue=1e-18,
Organism=Escherichia coli, GI1790849, Length=233, Percent_Identity=47.2103004291845, Blast_Score=212, Evalue=3e-56,
Organism=Caenorhabditis elegans, GI115534454, Length=230, Percent_Identity=30, Blast_Score=78, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI115534456, Length=230, Percent_Identity=30, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI115534458, Length=232, Percent_Identity=29.7413793103448, Blast_Score=73, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6321647, Length=313, Percent_Identity=38.0191693290735, Blast_Score=200, Evalue=3e-52,
Organism=Drosophila melanogaster, GI24661601, Length=206, Percent_Identity=32.5242718446602, Blast_Score=75, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006383
- InterPro:   IPR023190
- InterPro:   IPR004469 [H]

Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]

EC number: =3.1.3.3 [H]

Molecular weight: Translated: 45269; Mature: 45138

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAEENKEIILLKVSGHDKIGVTAGLTAVLAAYDANILDIGQADIHDTLSLGILFEIAAG
CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHEEEEEEECC
SSSAPVLKDLLFKAYELEIKVKFIPISIEDYEKWVKSQSKQRYIINILGEKLAASQLAAV
CCCCHHHHHHHHHHEEEEEEEEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
TKIMSDQNLNIDSIIRLTGRTSIVEKEQYPRSCIQLSVTGEIVNKIVMTASFMEISRTLN
HHHHCCCCCCHHHHEEECCCCCHHHHHHCCCHHEEEEECHHHHHHHHHHHHHHHHHHEEE
VDISFQEDNIYRRNRRLVCFDMDSTLIQTEVIDELAELNGVGDQVRAITESAMNGEIDFN
EEEEECCCCHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
ESFKKRMALLEGLSEEVLQNVAVNLPITQGAHRLMKALKYYGYKTAILSGGFTYFGEYLQ
HHHHHHHHHHHCHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHH
KELGIDYVHANQLEIKDGKLTGKYLGDIVDGQKKAEFLKAIAEKEGIHINQTIAVGDGAN
HHHCCEEEECCEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEECCCCC
DLPMLNLAGLGIAFHAKPKVKESASTSISSLGLDGVLYLLGYHDRYIDMM
CCCEEEEECCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHCCCCHHCCCC
>Mature Secondary Structure 
AAEENKEIILLKVSGHDKIGVTAGLTAVLAAYDANILDIGQADIHDTLSLGILFEIAAG
CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHEEEEEEECC
SSSAPVLKDLLFKAYELEIKVKFIPISIEDYEKWVKSQSKQRYIINILGEKLAASQLAAV
CCCCHHHHHHHHHHEEEEEEEEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
TKIMSDQNLNIDSIIRLTGRTSIVEKEQYPRSCIQLSVTGEIVNKIVMTASFMEISRTLN
HHHHCCCCCCHHHHEEECCCCCHHHHHHCCCHHEEEEECHHHHHHHHHHHHHHHHHHEEE
VDISFQEDNIYRRNRRLVCFDMDSTLIQTEVIDELAELNGVGDQVRAITESAMNGEIDFN
EEEEECCCCHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
ESFKKRMALLEGLSEEVLQNVAVNLPITQGAHRLMKALKYYGYKTAILSGGFTYFGEYLQ
HHHHHHHHHHHCHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHH
KELGIDYVHANQLEIKDGKLTGKYLGDIVDGQKKAEFLKAIAEKEGIHINQTIAVGDGAN
HHHCCEEEECCEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEECCCCC
DLPMLNLAGLGIAFHAKPKVKESASTSISSLGLDGVLYLLGYHDRYIDMM
CCCEEEEECCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA