Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146299445

Identifier: 146299445

GI number: 146299445

Start: 1952773

End: 1954101

Strand: Direct

Name: 146299445

Synonym: Fjoh_1685

Alternate gene names: NA

Gene position: 1952773-1954101 (Clockwise)

Preceding gene: 146299438

Following gene: 146299446

Centisome position: 32.03

GC content: 33.78

Gene sequence:

>1329_bases
ATGGGCAAGTTTTTATTAATGCTGTTTTTTGCGTTTACTATATTTTCATGCGGTACAGATACTGATGCCGGCGAGTTTGT
TGTTGGATCAGATTATCTTGCTCTCAATAATAAAGTTGTAATGGTTGATACCGTTACGGTTGAAATGTCTACAATAAATT
TTGATTCGCTGGTAACTTCAAGCCAGAGCCGAATTTTAGTTGGAAATTACGATGATCCAATTTTTGGAAAAATAAAATCG
AACAGCTATTTTCAAATTTCCGGAAGTTCGTATTCGTTGAGTAATTCAGGATCAGATACCGAAGCGGTTAATTTTGTTTT
TGATTCGATTTCGATGATTTTAAAATACGATAACTATTATTATGGTGATACAACTCAGGTTCAAAAATTCGATATCCATC
GTTTAACTCAAAAAGTAAAACCAAACGTAGACGATAAAAGTTTTTATAATAATTCTACTTTGACTTACAGTGATGAAGTT
CTGGGAACAATTTCATATAAACCCAGACCAACAGAGAAGGATTCGATTAATATTAGAATGAGTGACGCGTTTGGACAAGA
TATTTTTCAGAAAATCAAAAAAAGAGAAATTACAGGTTTTGACAATTTTACAGAGTATCTAAAAGGACTTGTATTAGTGC
CATCCGGAACTAACTCATCAAGTGCAATTGGGTTTAATGTTTCAACGAGCAAAGTGAGGTTGTACTATTCTAAATATCAA
GCCGATAATGATGATGATTCGCTTATTTTAGATTTTACTATTGCAGATGCTTCCAAACAGTTTAATTCTGTCTCGCTGGA
TAAAACCGGAACAATAATTCAAAATTTACCCATTTCTACCCAAAGGCTTTCGAGTTCGCAGACCAATAAGCAGGGATTTA
TTCAATCTGGCACAGGAGTGGCCTGCAGGATTGATTTCCCAAATATAAAACAGCTTAAATACATTTCTGCTAATGGAGCA
ATTGTCGATGCACAGCTGTTCTTAAAACCGGTTAATAATTCGTATTCCGATAAATATCCGCTGTCTGATTCCTTAAAGGT
TTATGTGGGAGATAATTTAAACAGAATCAGCAGTCCTTTGCTCAATGCCGCTGGTAACTCTGTTTATGGAATTTTAAATA
AAAAAAGCGATGAGTTCAATGAAAACATTGGATATACAATACCGTTAGGGAATTTTCTACAGAAAGAAATGCTGAAAGCT
TCTGATTCCAGGTCTGCATTAATTTTAACCTTACCAGGAATATCTAAATCAGTTGACAGACTTGTTTTAGGAGATCAAAA
GCATTCGCAAAATAAAATTCAAATTAAGGTTTATTACATCTCATATTAA

Upstream 100 bases:

>100_bases
GTAGATGTTTTATCGCCATTTATAGTCGAAATATGCTTGCCTGTATATGTTATAGTGAACTGCAGAATAGTGCCTTTTAT
ATTTGCCAAAAAAATTGATT

Downstream 100 bases:

>100_bases
ATGAAAAATAAAATAGTTTTTTTTAGCTGCTTCATTTTAATGTCGCTTACTTCGTTTTCACAAAGTATATCAAGTTCTCC
ATATTCATTATATGGTGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MGKFLLMLFFAFTIFSCGTDTDAGEFVVGSDYLALNNKVVMVDTVTVEMSTINFDSLVTSSQSRILVGNYDDPIFGKIKS
NSYFQISGSSYSLSNSGSDTEAVNFVFDSISMILKYDNYYYGDTTQVQKFDIHRLTQKVKPNVDDKSFYNNSTLTYSDEV
LGTISYKPRPTEKDSINIRMSDAFGQDIFQKIKKREITGFDNFTEYLKGLVLVPSGTNSSSAIGFNVSTSKVRLYYSKYQ
ADNDDDSLILDFTIADASKQFNSVSLDKTGTIIQNLPISTQRLSSSQTNKQGFIQSGTGVACRIDFPNIKQLKYISANGA
IVDAQLFLKPVNNSYSDKYPLSDSLKVYVGDNLNRISSPLLNAAGNSVYGILNKKSDEFNENIGYTIPLGNFLQKEMLKA
SDSRSALILTLPGISKSVDRLVLGDQKHSQNKIQIKVYYISY

Sequences:

>Translated_442_residues
MGKFLLMLFFAFTIFSCGTDTDAGEFVVGSDYLALNNKVVMVDTVTVEMSTINFDSLVTSSQSRILVGNYDDPIFGKIKS
NSYFQISGSSYSLSNSGSDTEAVNFVFDSISMILKYDNYYYGDTTQVQKFDIHRLTQKVKPNVDDKSFYNNSTLTYSDEV
LGTISYKPRPTEKDSINIRMSDAFGQDIFQKIKKREITGFDNFTEYLKGLVLVPSGTNSSSAIGFNVSTSKVRLYYSKYQ
ADNDDDSLILDFTIADASKQFNSVSLDKTGTIIQNLPISTQRLSSSQTNKQGFIQSGTGVACRIDFPNIKQLKYISANGA
IVDAQLFLKPVNNSYSDKYPLSDSLKVYVGDNLNRISSPLLNAAGNSVYGILNKKSDEFNENIGYTIPLGNFLQKEMLKA
SDSRSALILTLPGISKSVDRLVLGDQKHSQNKIQIKVYYISY
>Mature_441_residues
GKFLLMLFFAFTIFSCGTDTDAGEFVVGSDYLALNNKVVMVDTVTVEMSTINFDSLVTSSQSRILVGNYDDPIFGKIKSN
SYFQISGSSYSLSNSGSDTEAVNFVFDSISMILKYDNYYYGDTTQVQKFDIHRLTQKVKPNVDDKSFYNNSTLTYSDEVL
GTISYKPRPTEKDSINIRMSDAFGQDIFQKIKKREITGFDNFTEYLKGLVLVPSGTNSSSAIGFNVSTSKVRLYYSKYQA
DNDDDSLILDFTIADASKQFNSVSLDKTGTIIQNLPISTQRLSSSQTNKQGFIQSGTGVACRIDFPNIKQLKYISANGAI
VDAQLFLKPVNNSYSDKYPLSDSLKVYVGDNLNRISSPLLNAAGNSVYGILNKKSDEFNENIGYTIPLGNFLQKEMLKAS
DSRSALILTLPGISKSVDRLVLGDQKHSQNKIQIKVYYISY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49150; Mature: 49019

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00154 ATPASE_E1_E2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKFLLMLFFAFTIFSCGTDTDAGEFVVGSDYLALNNKVVMVDTVTVEMSTINFDSLVTS
CCHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEECCEEEEEEEEEEEEEEECHHHHHCC
SQSRILVGNYDDPIFGKIKSNSYFQISGSSYSLSNSGSDTEAVNFVFDSISMILKYDNYY
CCCEEEEECCCCCCEEEECCCCEEEECCCEEEECCCCCCCHHHHHHHHHHEEEEEECCEE
YGDTTQVQKFDIHRLTQKVKPNVDDKSFYNNSTLTYSDEVLGTISYKPRPTEKDSINIRM
ECCCCEEEEHHHHHHHHHHCCCCCCHHCCCCCEEEECCCEEEEEECCCCCCCCCEEEEEE
SDAFGQDIFQKIKKREITGFDNFTEYLKGLVLVPSGTNSSSAIGFNVSTSKVRLYYSKYQ
CCHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEECCEEEEEEEEEC
ADNDDDSLILDFTIADASKQFNSVSLDKTGTIIQNLPISTQRLSSSQTNKQGFIQSGTGV
CCCCCCCEEEEEEEECCCCCCCCEECCCCCCEEECCCCCHHHHCCCCCCCCCCEECCCCE
ACRIDFPNIKQLKYISANGAIVDAQLFLKPVNNSYSDKYPLSDSLKVYVGDNLNRISSPL
EEEECCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHH
LNAAGNSVYGILNKKSDEFNENIGYTIPLGNFLQKEMLKASDSRSALILTLPGISKSVDR
HHHCCCEEEEEECCCCCHHCCCCCEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHH
LVLGDQKHSQNKIQIKVYYISY
EEECCCCCCCCEEEEEEEEEEC
>Mature Secondary Structure 
GKFLLMLFFAFTIFSCGTDTDAGEFVVGSDYLALNNKVVMVDTVTVEMSTINFDSLVTS
CHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEECCEEEEEEEEEEEEEEECHHHHHCC
SQSRILVGNYDDPIFGKIKSNSYFQISGSSYSLSNSGSDTEAVNFVFDSISMILKYDNYY
CCCEEEEECCCCCCEEEECCCCEEEECCCEEEECCCCCCCHHHHHHHHHHEEEEEECCEE
YGDTTQVQKFDIHRLTQKVKPNVDDKSFYNNSTLTYSDEVLGTISYKPRPTEKDSINIRM
ECCCCEEEEHHHHHHHHHHCCCCCCHHCCCCCEEEECCCEEEEEECCCCCCCCCEEEEEE
SDAFGQDIFQKIKKREITGFDNFTEYLKGLVLVPSGTNSSSAIGFNVSTSKVRLYYSKYQ
CCHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEECCEEEEEEEEEC
ADNDDDSLILDFTIADASKQFNSVSLDKTGTIIQNLPISTQRLSSSQTNKQGFIQSGTGV
CCCCCCCEEEEEEEECCCCCCCCEECCCCCCEEECCCCCHHHHCCCCCCCCCCEECCCCE
ACRIDFPNIKQLKYISANGAIVDAQLFLKPVNNSYSDKYPLSDSLKVYVGDNLNRISSPL
EEEECCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHH
LNAAGNSVYGILNKKSDEFNENIGYTIPLGNFLQKEMLKASDSRSALILTLPGISKSVDR
HHHCCCEEEEEECCCCCHHCCCCCEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHH
LVLGDQKHSQNKIQIKVYYISY
EEECCCCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA