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The map label for this gene is psaB [H]

Identifier: 146299407

GI number: 146299407

Start: 1910260

End: 1912260

Strand: Direct

Name: psaB [H]

Synonym: Fjoh_1647

Alternate gene names: 146299407

Gene position: 1910260-1912260 (Clockwise)

Preceding gene: 146299406

Following gene: 146299409

Centisome position: 31.33

GC content: 33.43

Gene sequence:

>2001_bases
ATGAAGCTTAAAAAAATACTTTTTCCCATTTTGTTGCTTTGCTTTTTTATGGCAGATGCCCAAACGGCCAGTATAAAAAA
TGCAGATAAAAAATACGACAGTTACGCTTACGCGGATGCTATAAAAGCCTATGAAAAATTAGTTGAAAAAGGAGTTAGAG
AAGAAAGAATATTTCAAAGACTTGGAAATTCCTATTATTTCATTGGCGAATTAAAAGACGCCTTAAAATACTATCAGGAA
TTATTCAGTATTAATGAAAATCAGGAAGCAGACTATTTGTATAAATATGCTCAATGCTTAAAATCAGAAGGGAATTATAC
TAAAGCCGATGAAATTTTAGAGAAATTCTCCCAAAAAGCACCTTCAGATAAAAGAGTCGTTTTATTCTTAAAAAACAGAA
ATTATTTAGAAGATATTAAATCAAATTCAGGACGTTTTGATATTGCAGATGCCGGAATCAACTCAAAAGATTCAGATTAC
GGAAGCACTATTTTAGACAATAAATTAGTCTTTACATCGGCAAGAGATACAGGTTCTATTATCAAAAAGAATTTTAAATG
GACAAATAAAGCCATTTCAACTTTATATGCTGTAGATTTAAATCCAGACGGGAGCATTGGAAAACCAATGTTGTTTCATA
AACAAAATCTGCAGGTTAACTTCAATCAGTCTACTCCCGTTTTTACAAAAGATGGTAAAACCATGTATTTTACCAGAAAT
AACTCAGTAGACGGAAAAAGAAAACAAAATGAAAACAAGGTCACATTTTTAAAACTATACAAAGCCGTTTTAATTAATAA
CGAATGGAAAGAAGTACAAGAACTTCCGTTTAACAGTGACGAATACAGCGTAGCGCATCCAGCTTTAAGTGTAGACGAAA
AAACATTATATTTTGCATCAGATATGCCGGGAACGTTAGGACTTTCGGATATCTATAAAGTAAGCATACTTTCTAACGGA
GGTTTTGGTGCACCAGAAAATTTAGGTCCAGAAATTAATACCGAAGGAAGAGAAACTTTTCCTTTTATTTCAGATGAAAA
CGAACTTTATTTTGCCAGTGACGGAAGACCAGGTTTAGGCGGACTGGATATTTTTGTTTCTAAAATTACCAAAGAATGCA
CTTTTGATGAAGTACAAAATGTTGGTGAACCAATTAACAGTAAACAAGACGATTTTGCTTTTATCATTAACAGTAAAAAC
AGAAATGGTTTTTTCTCTTCAAACCGAGTAAACGGCCATGGACTTGACGATGTATACCGATTTACAGAAAACAGAAGATT
AATTTGCGAACAGCAGATATCCGGAACCATTACTGATCAGGAAACAAACGAAACACTTTCAAACGTTGCCTTGATTTTAT
TTGATGAAGCAGGTAAAACTGCTGTTGAAGCTAAATCAGATGCCAATGGAAATTATGTTTTTTCGAATGTAAAATGCGGT
AAAAAGTACTATATCAAAACAGCTAAAGAAGATTATTTGTTTAAAGAAGTTTCGATAACACTGAAAAAGGCAACAGGATC
TGCTTCTCTGCCAATAGCTTTAGAAAAGAAGCCAAAGCCAATTACAGCAATTCCGGTTGTAATAAAAACCAATAATTCGA
TTAAACCAGTTAAAGTTACCATTGCAGTTGGAACCGATTTAGGGAAATTATTAAAAATCCCGATGAACTTTTTTGATTTA
GGAAAAGCCACAATCAAAAAATCGTCTGTACCTCAATTGCAAAAAATGGTCGATATGTTAAACCAATATCCAACAATTAA
AGTCGATATTCGTTCGCATACAGACAGCCGTTCATCTTCAGAAAGCAATCAGATTTTATCAGATAAAAGAGCACAGTCTA
CCAAAGACTGGCTGGTAAGCAAAGGAATTAATGCAGACCGATTAACCGCAAAAGGATTTGGAGAAACACAATTAGTAAAT
AAATGTGCCGATGGTGTAAAATGTACAGAACAACAACATCAGCAAAACCGACGAAGCGAGTTTATAATCGTAAGTTTGTA
A

Upstream 100 bases:

>100_bases
AGAAAATACAATTCAGGATCGCATGAGATTTTCCTTCGTTTTGATTTCTTTAATAATTACAGCAAACTTACCTCACCAAG
ATTCTTTTAATTGATAAATT

Downstream 100 bases:

>100_bases
TTTGATTAAATGAAAAAGGCTTTCTAGGAATTTATTTCAGAAAGCCTTTTTTAATTTGGCATATTGAAAGAGATATGCCG
CTCCGCTGGAGCTTTTAGAA

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: PsaB [H]

Number of amino acids: Translated: 666; Mature: 666

Protein sequence:

>666_residues
MKLKKILFPILLLCFFMADAQTASIKNADKKYDSYAYADAIKAYEKLVEKGVREERIFQRLGNSYYFIGELKDALKYYQE
LFSINENQEADYLYKYAQCLKSEGNYTKADEILEKFSQKAPSDKRVVLFLKNRNYLEDIKSNSGRFDIADAGINSKDSDY
GSTILDNKLVFTSARDTGSIIKKNFKWTNKAISTLYAVDLNPDGSIGKPMLFHKQNLQVNFNQSTPVFTKDGKTMYFTRN
NSVDGKRKQNENKVTFLKLYKAVLINNEWKEVQELPFNSDEYSVAHPALSVDEKTLYFASDMPGTLGLSDIYKVSILSNG
GFGAPENLGPEINTEGRETFPFISDENELYFASDGRPGLGGLDIFVSKITKECTFDEVQNVGEPINSKQDDFAFIINSKN
RNGFFSSNRVNGHGLDDVYRFTENRRLICEQQISGTITDQETNETLSNVALILFDEAGKTAVEAKSDANGNYVFSNVKCG
KKYYIKTAKEDYLFKEVSITLKKATGSASLPIALEKKPKPITAIPVVIKTNNSIKPVKVTIAVGTDLGKLLKIPMNFFDL
GKATIKKSSVPQLQKMVDMLNQYPTIKVDIRSHTDSRSSSESNQILSDKRAQSTKDWLVSKGINADRLTAKGFGETQLVN
KCADGVKCTEQQHQQNRRSEFIIVSL

Sequences:

>Translated_666_residues
MKLKKILFPILLLCFFMADAQTASIKNADKKYDSYAYADAIKAYEKLVEKGVREERIFQRLGNSYYFIGELKDALKYYQE
LFSINENQEADYLYKYAQCLKSEGNYTKADEILEKFSQKAPSDKRVVLFLKNRNYLEDIKSNSGRFDIADAGINSKDSDY
GSTILDNKLVFTSARDTGSIIKKNFKWTNKAISTLYAVDLNPDGSIGKPMLFHKQNLQVNFNQSTPVFTKDGKTMYFTRN
NSVDGKRKQNENKVTFLKLYKAVLINNEWKEVQELPFNSDEYSVAHPALSVDEKTLYFASDMPGTLGLSDIYKVSILSNG
GFGAPENLGPEINTEGRETFPFISDENELYFASDGRPGLGGLDIFVSKITKECTFDEVQNVGEPINSKQDDFAFIINSKN
RNGFFSSNRVNGHGLDDVYRFTENRRLICEQQISGTITDQETNETLSNVALILFDEAGKTAVEAKSDANGNYVFSNVKCG
KKYYIKTAKEDYLFKEVSITLKKATGSASLPIALEKKPKPITAIPVVIKTNNSIKPVKVTIAVGTDLGKLLKIPMNFFDL
GKATIKKSSVPQLQKMVDMLNQYPTIKVDIRSHTDSRSSSESNQILSDKRAQSTKDWLVSKGINADRLTAKGFGETQLVN
KCADGVKCTEQQHQQNRRSEFIIVSL
>Mature_666_residues
MKLKKILFPILLLCFFMADAQTASIKNADKKYDSYAYADAIKAYEKLVEKGVREERIFQRLGNSYYFIGELKDALKYYQE
LFSINENQEADYLYKYAQCLKSEGNYTKADEILEKFSQKAPSDKRVVLFLKNRNYLEDIKSNSGRFDIADAGINSKDSDY
GSTILDNKLVFTSARDTGSIIKKNFKWTNKAISTLYAVDLNPDGSIGKPMLFHKQNLQVNFNQSTPVFTKDGKTMYFTRN
NSVDGKRKQNENKVTFLKLYKAVLINNEWKEVQELPFNSDEYSVAHPALSVDEKTLYFASDMPGTLGLSDIYKVSILSNG
GFGAPENLGPEINTEGRETFPFISDENELYFASDGRPGLGGLDIFVSKITKECTFDEVQNVGEPINSKQDDFAFIINSKN
RNGFFSSNRVNGHGLDDVYRFTENRRLICEQQISGTITDQETNETLSNVALILFDEAGKTAVEAKSDANGNYVFSNVKCG
KKYYIKTAKEDYLFKEVSITLKKATGSASLPIALEKKPKPITAIPVVIKTNNSIKPVKVTIAVGTDLGKLLKIPMNFFDL
GKATIKKSSVPQLQKMVDMLNQYPTIKVDIRSHTDSRSSSESNQILSDKRAQSTKDWLVSKGINADRLTAKGFGETQLVN
KCADGVKCTEQQHQQNRRSEFIIVSL

Specific function: PsaA and psaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which tran

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006665
- InterPro:   IPR001280
- InterPro:   IPR020586
- InterPro:   IPR006244 [H]

Pfam domain/function: PF00691 OmpA; PF00223 PsaA_PsaB [H]

EC number: NA

Molecular weight: Translated: 74917; Mature: 74917

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKKILFPILLLCFFMADAQTASIKNADKKYDSYAYADAIKAYEKLVEKGVREERIFQR
CCHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LGNSYYFIGELKDALKYYQELFSINENQEADYLYKYAQCLKSEGNYTKADEILEKFSQKA
HCCCEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
PSDKRVVLFLKNRNYLEDIKSNSGRFDIADAGINSKDSDYGSTILDNKLVFTSARDTGSI
CCCCEEEEEECCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHCCEEEEEECCCCHHH
IKKNFKWTNKAISTLYAVDLNPDGSIGKPMLFHKQNLQVNFNQSTPVFTKDGKTMYFTRN
HHHCCCHHHHHEEEEEEEECCCCCCCCCCEEEEECCCEEEECCCCCEEECCCCEEEEEEC
NSVDGKRKQNENKVTFLKLYKAVLINNEWKEVQELPFNSDEYSVAHPALSVDEKTLYFAS
CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEECCCCCCCCCEEEEEC
DMPGTLGLSDIYKVSILSNGGFGAPENLGPEINTEGRETFPFISDENELYFASDGRPGLG
CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEECCCCCCCC
GLDIFVSKITKECTFDEVQNVGEPINSKQDDFAFIINSKNRNGFFSSNRVNGHGLDDVYR
HHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHH
FTENRRLICEQQISGTITDQETNETLSNVALILFDEAGKTAVEAKSDANGNYVFSNVKCG
HHCCCCEEEEHHCCCCCCCCHHHHHHHCEEEEEEECCCCCEEECCCCCCCCEEEEEEECC
KKYYIKTAKEDYLFKEVSITLKKATGSASLPIALEKKPKPITAIPVVIKTNNSIKPVKVT
CEEEEEECCHHHEEEEEEEEEEECCCCCCCCEEECCCCCCEEEEEEEEECCCCCCEEEEE
IAVGTDLGKLLKIPMNFFDLGKATIKKSSVPQLQKMVDMLNQYPTIKVDIRSHTDSRSSS
EEECCCHHHHHHCCCCHHHCCHHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCC
ESNQILSDKRAQSTKDWLVSKGINADRLTAKGFGETQLVNKCADGVKCTEQQHQQNRRSE
CHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHCCCHHHHHHHHHCCCCC
FIIVSL
EEEEEC
>Mature Secondary Structure
MKLKKILFPILLLCFFMADAQTASIKNADKKYDSYAYADAIKAYEKLVEKGVREERIFQR
CCHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LGNSYYFIGELKDALKYYQELFSINENQEADYLYKYAQCLKSEGNYTKADEILEKFSQKA
HCCCEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
PSDKRVVLFLKNRNYLEDIKSNSGRFDIADAGINSKDSDYGSTILDNKLVFTSARDTGSI
CCCCEEEEEECCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHCCEEEEEECCCCHHH
IKKNFKWTNKAISTLYAVDLNPDGSIGKPMLFHKQNLQVNFNQSTPVFTKDGKTMYFTRN
HHHCCCHHHHHEEEEEEEECCCCCCCCCCEEEEECCCEEEECCCCCEEECCCCEEEEEEC
NSVDGKRKQNENKVTFLKLYKAVLINNEWKEVQELPFNSDEYSVAHPALSVDEKTLYFAS
CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEECCCCCCCCCEEEEEC
DMPGTLGLSDIYKVSILSNGGFGAPENLGPEINTEGRETFPFISDENELYFASDGRPGLG
CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEECCCCCCCC
GLDIFVSKITKECTFDEVQNVGEPINSKQDDFAFIINSKNRNGFFSSNRVNGHGLDDVYR
HHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHH
FTENRRLICEQQISGTITDQETNETLSNVALILFDEAGKTAVEAKSDANGNYVFSNVKCG
HHCCCCEEEEHHCCCCCCCCHHHHHHHCEEEEEEECCCCCEEECCCCCCCCEEEEEEECC
KKYYIKTAKEDYLFKEVSITLKKATGSASLPIALEKKPKPITAIPVVIKTNNSIKPVKVT
CEEEEEECCHHHEEEEEEEEEEECCCCCCCCEEECCCCCCEEEEEEEEECCCCCCEEEEE
IAVGTDLGKLLKIPMNFFDLGKATIKKSSVPQLQKMVDMLNQYPTIKVDIRSHTDSRSSS
EEECCCHHHHHHCCCCHHHCCHHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCC
ESNQILSDKRAQSTKDWLVSKGINADRLTAKGFGETQLVNKCADGVKCTEQQHQQNRRSE
CHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHCCCHHHHHHHHHCCCCC
FIIVSL
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]