Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146299406

Identifier: 146299406

GI number: 146299406

Start: 1909362

End: 1910249

Strand: Direct

Name: 146299406

Synonym: Fjoh_1646

Alternate gene names: NA

Gene position: 1909362-1910249 (Clockwise)

Preceding gene: 146299405

Following gene: 146299407

Centisome position: 31.32

GC content: 36.26

Gene sequence:

>888_bases
ATGTTTTTTACCATTGTGTGTTCAGCGCAGCAAGATGCTCAGTTTACACAATACATGTACAACACTATCGGAATAAATCC
GGCTTATGCAGGTTCGCGCGGCGTACTGAGTGTTTTTGGGTTATATCGTACACAATGGATTGGTCTTGACGGAGCGCCGG
AAACAAGTACTTTTTCTGTAAACACACCTTTAACCAACAGCAATTTAGGATTAGGAGTTTCTTTGGTAAACGATAAAATC
GGGCCAACGAACGAAAATACTTTATCTGCTGATTTGTCATACAGTATTCCAACATCAGAATCATTTAAACTTTCGTTTGG
TATCAAGGCAACAGCCAATCTTTTTAATCTTGATGCTAGTAAATTGAGTTATGAAGATCAAAACGACGAATTATTTCAGG
ACATCAAAAATAAGTTTACACCCAATATTGGAGCCGGAATTTACTGGCATTCAGATCGTGCTTATTTAGGATTATCAGTT
CCTAATTTTATCGAAACCAATCGCTATGACAATAATGATGTCGCTATTTTCAAAGAAAAAATAAACTATTACTTCATGGC
AGGTTATGTATTTAATCTGGATCATTTAGAGTATATAAAATTCAAACCGGCATTGTTGACAAAAATGGTAGAAGGAGCAC
CTTTGCAGGTAGATGTTTCTGGTAATTTCATGTTCAATGATAAGTTCGTTCTTGGGCTTGCTTATCGCTGGAGTGCTTCG
GTAAGTGCTATGGCAGGTTTTCAGGTTACAAAAGGCATGTATATAGGATATGGTTACGATCACGAAACCACACAATTAAG
AAAATACAATTCAGGATCGCATGAGATTTTCCTTCGTTTTGATTTCTTTAATAATTACAGCAAACTTACCTCACCAAGAT
TCTTTTAA

Upstream 100 bases:

>100_bases
CAGGTTATTTATACATTAATAAATAAAAAATACAAACGGCTTACGATAAGCTGAGCCGTTTTTTAAAATCTTTAAGATGA
AAAAATTAGGTTTAATTTTT

Downstream 100 bases:

>100_bases
TTGATAAATTATGAAGCTTAAAAAAATACTTTTTCCCATTTTGTTGCTTTGCTTTTTTATGGCAGATGCCCAAACGGCCA
GTATAAAAAATGCAGATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MFFTIVCSAQQDAQFTQYMYNTIGINPAYAGSRGVLSVFGLYRTQWIGLDGAPETSTFSVNTPLTNSNLGLGVSLVNDKI
GPTNENTLSADLSYSIPTSESFKLSFGIKATANLFNLDASKLSYEDQNDELFQDIKNKFTPNIGAGIYWHSDRAYLGLSV
PNFIETNRYDNNDVAIFKEKINYYFMAGYVFNLDHLEYIKFKPALLTKMVEGAPLQVDVSGNFMFNDKFVLGLAYRWSAS
VSAMAGFQVTKGMYIGYGYDHETTQLRKYNSGSHEIFLRFDFFNNYSKLTSPRFF

Sequences:

>Translated_295_residues
MFFTIVCSAQQDAQFTQYMYNTIGINPAYAGSRGVLSVFGLYRTQWIGLDGAPETSTFSVNTPLTNSNLGLGVSLVNDKI
GPTNENTLSADLSYSIPTSESFKLSFGIKATANLFNLDASKLSYEDQNDELFQDIKNKFTPNIGAGIYWHSDRAYLGLSV
PNFIETNRYDNNDVAIFKEKINYYFMAGYVFNLDHLEYIKFKPALLTKMVEGAPLQVDVSGNFMFNDKFVLGLAYRWSAS
VSAMAGFQVTKGMYIGYGYDHETTQLRKYNSGSHEIFLRFDFFNNYSKLTSPRFF
>Mature_295_residues
MFFTIVCSAQQDAQFTQYMYNTIGINPAYAGSRGVLSVFGLYRTQWIGLDGAPETSTFSVNTPLTNSNLGLGVSLVNDKI
GPTNENTLSADLSYSIPTSESFKLSFGIKATANLFNLDASKLSYEDQNDELFQDIKNKFTPNIGAGIYWHSDRAYLGLSV
PNFIETNRYDNNDVAIFKEKINYYFMAGYVFNLDHLEYIKFKPALLTKMVEGAPLQVDVSGNFMFNDKFVLGLAYRWSAS
VSAMAGFQVTKGMYIGYGYDHETTQLRKYNSGSHEIFLRFDFFNNYSKLTSPRFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33295; Mature: 33295

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFTIVCSAQQDAQFTQYMYNTIGINPAYAGSRGVLSVFGLYRTQWIGLDGAPETSTFSV
CEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCEEEE
NTPLTNSNLGLGVSLVNDKIGPTNENTLSADLSYSIPTSESFKLSFGIKATANLFNLDAS
ECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEECCEEECEEEECCHH
KLSYEDQNDELFQDIKNKFTPNIGAGIYWHSDRAYLGLSVPNFIETNRYDNNDVAIFKEK
HCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCCHHHCCCCCCCCEEEEEEC
INYYFMAGYVFNLDHLEYIKFKPALLTKMVEGAPLQVDVSGNFMFNDKFVLGLAYRWSAS
CCEEEEEEEEECCCCEEEEEECHHHHHHHHCCCCEEEEECCCEEECCEEEEEEEEECCCC
VSAMAGFQVTKGMYIGYGYDHETTQLRKYNSGSHEIFLRFDFFNNYSKLTSPRFF
CHHHCCEEEECCEEEEECCCCCCCEEEECCCCCEEEEEEEEEECCHHHCCCCCCC
>Mature Secondary Structure
MFFTIVCSAQQDAQFTQYMYNTIGINPAYAGSRGVLSVFGLYRTQWIGLDGAPETSTFSV
CEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCEEEE
NTPLTNSNLGLGVSLVNDKIGPTNENTLSADLSYSIPTSESFKLSFGIKATANLFNLDAS
ECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEECCEEECEEEECCHH
KLSYEDQNDELFQDIKNKFTPNIGAGIYWHSDRAYLGLSVPNFIETNRYDNNDVAIFKEK
HCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCCHHHCCCCCCCCEEEEEEC
INYYFMAGYVFNLDHLEYIKFKPALLTKMVEGAPLQVDVSGNFMFNDKFVLGLAYRWSAS
CCEEEEEEEEECCCCEEEEEECHHHHHHHHCCCCEEEEECCCEEECCEEEEEEEEECCCC
VSAMAGFQVTKGMYIGYGYDHETTQLRKYNSGSHEIFLRFDFFNNYSKLTSPRFF
CHHHCCEEEECCEEEEECCCCCCCEEEECCCCCEEEEEEEEEECCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA