| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is trxA [H]
Identifier: 146299384
GI number: 146299384
Start: 1873094
End: 1873396
Strand: Direct
Name: trxA [H]
Synonym: Fjoh_1624
Alternate gene names: 146299384
Gene position: 1873094-1873396 (Clockwise)
Preceding gene: 146299383
Following gene: 146299388
Centisome position: 30.72
GC content: 36.63
Gene sequence:
>303_bases ATGTCAAAATTTGGAGAACTTATAAATGCTCAGGTTCCAGTGTTAATTGACTTCTACACAGATTGGAACGAATCATCAGT ATTGATGCATCCGGTAATAAAGGATGTTGCGGCGGCACTAGGCGACAAAGCAAAAGTAATTAAGATTGATGTTGATAAAA ATCAGGAACTAGCCGAAGCATTAAGAATTAAAGGACTTCCGACTTTAATGATATACAAGGAAGGACAAATGATCTGGAGA CAATCTGGAGAACTTGATGCAAATACACTTATCGGAATTGTTCAGGAGCAATTCAATGTATAA
Upstream 100 bases:
>100_bases AACTAAAAAAAGGCGAGAATGTGGCTTAATTCGTTAAAAATGCTACATTTGTATTAATTATCTCTTTTTAATAGATTAAA AGAATTAAATTTTTGGTTTT
Downstream 100 bases:
>100_bases TAATTCTTTCTAAAAGATATTATCAGTGTATAATATCAAATTTATATCCATTTTCTTTTAAAAAATGAAGCGTTTTTGGC AGAGCAAATTTTAAATTTGG
Product: thioredoxin domain-containing protein
Products: NA
Alternate protein names: Trx [H]
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MSKFGELINAQVPVLIDFYTDWNESSVLMHPVIKDVAAALGDKAKVIKIDVDKNQELAEALRIKGLPTLMIYKEGQMIWR QSGELDANTLIGIVQEQFNV
Sequences:
>Translated_100_residues MSKFGELINAQVPVLIDFYTDWNESSVLMHPVIKDVAAALGDKAKVIKIDVDKNQELAEALRIKGLPTLMIYKEGQMIWR QSGELDANTLIGIVQEQFNV >Mature_99_residues SKFGELINAQVPVLIDFYTDWNESSVLMHPVIKDVAAALGDKAKVIKIDVDKNQELAEALRIKGLPTLMIYKEGQMIWRQ SGELDANTLIGIVQEQFNV
Specific function: Component of the thioredoxin-thioredoxin reductase system. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: 1.8.1.8 [C]
Molecular weight: Translated: 11216; Mature: 11085
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFGELINAQVPVLIDFYTDWNESSVLMHPVIKDVAAALGDKAKVIKIDVDKNQELAEA CCCHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH LRIKGLPTLMIYKEGQMIWRQSGELDANTLIGIVQEQFNV HHHCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SKFGELINAQVPVLIDFYTDWNESSVLMHPVIKDVAAALGDKAKVIKIDVDKNQELAEA CCHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH LRIKGLPTLMIYKEGQMIWRQSGELDANTLIGIVQEQFNV HHHCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]