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The map label for this gene is rimP [H]

Identifier: 146299388

GI number: 146299388

Start: 1879544

End: 1880044

Strand: Direct

Name: rimP [H]

Synonym: Fjoh_1628

Alternate gene names: 146299388

Gene position: 1879544-1880044 (Clockwise)

Preceding gene: 146299384

Following gene: 146299389

Centisome position: 30.83

GC content: 33.73

Gene sequence:

>501_bases
ATGAGGGGACTAAGTGTCCCCTCTTTTTATAAAATTATGACATTTAAGGAAAAGGTAAACGAATTAATTACAGAAGCACT
TCTGGAAAAGCCATCGATCTTTTTGATTGATCTTGCTGTTTCGGATTCTTTTAAAATTAGTGTTGGTTTAGACGGAGATA
ATGGAGTTGCGCTTCAGGATTGTATTGATATTAGTCGTGCAATTGAGAATAATCTGGATCGTGAAGAGCAGGATTTTTCG
CTTGAAGTAGCATCAGTTGGGGTAGGATCTCCTTTGAAATTGATAAGACAATACAAGAAAAATATTGGTAGAACGTTGAT
TGTTACTACAAATAATGAAAAAATCGAGGCAGAATTGATAGAAGCTAACGATGTTTTTATAATTTTGTCTTGGAAGGCAA
GAGAACCAAAAAAAGTAGGAAAAGGAAAAGAAACAGTTCAAAAAGAACAACAGATACCTTATACAGAGATAAAAGAGGCA
GTTGTTACAGTAACATTTTAA

Upstream 100 bases:

>100_bases
TTTGGTATTATAAAGGTAACGATTATTTTTGCAGCAATCTATTTATTTGATTTATAAAAAAATCACTATATTTGCACCGT
TATTTATTAAAATCTAAATA

Downstream 100 bases:

>100_bases
TTAAAGAATTCGCATGGAAAATTTAGCATTAATCGATTCATTCTCAGAGTTTAAAGATAATAAACTTATTGATCGTGTAA
CGCTTATGGCAATTTTGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MRGLSVPSFYKIMTFKEKVNELITEALLEKPSIFLIDLAVSDSFKISVGLDGDNGVALQDCIDISRAIENNLDREEQDFS
LEVASVGVGSPLKLIRQYKKNIGRTLIVTTNNEKIEAELIEANDVFIILSWKAREPKKVGKGKETVQKEQQIPYTEIKEA
VVTVTF

Sequences:

>Translated_166_residues
MRGLSVPSFYKIMTFKEKVNELITEALLEKPSIFLIDLAVSDSFKISVGLDGDNGVALQDCIDISRAIENNLDREEQDFS
LEVASVGVGSPLKLIRQYKKNIGRTLIVTTNNEKIEAELIEANDVFIILSWKAREPKKVGKGKETVQKEQQIPYTEIKEA
VVTVTF
>Mature_166_residues
MRGLSVPSFYKIMTFKEKVNELITEALLEKPSIFLIDLAVSDSFKISVGLDGDNGVALQDCIDISRAIENNLDREEQDFS
LEVASVGVGSPLKLIRQYKKNIGRTLIVTTNNEKIEAELIEANDVFIILSWKAREPKKVGKGKETVQKEQQIPYTEIKEA
VVTVTF

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 18605; Mature: 18605

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGLSVPSFYKIMTFKEKVNELITEALLEKPSIFLIDLAVSDSFKISVGLDGDNGVALQD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCCCCHHH
CIDISRAIENNLDREEQDFSLEVASVGVGSPLKLIRQYKKNIGRTLIVTTNNEKIEAELI
HHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCEEEEEEE
EANDVFIILSWKAREPKKVGKGKETVQKEQQIPYTEIKEAVVTVTF
ECCCEEEEEEECCCCCHHHCCCHHHHHHHHCCCHHHHHHEEEEEEC
>Mature Secondary Structure
MRGLSVPSFYKIMTFKEKVNELITEALLEKPSIFLIDLAVSDSFKISVGLDGDNGVALQD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCCCCHHH
CIDISRAIENNLDREEQDFSLEVASVGVGSPLKLIRQYKKNIGRTLIVTTNNEKIEAELI
HHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCEEEEEEE
EANDVFIILSWKAREPKKVGKGKETVQKEQQIPYTEIKEAVVTVTF
ECCCEEEEEEECCCCCHHHCCCHHHHHHHHCCCHHHHHHEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA