| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299351
Identifier: 146299351
GI number: 146299351
Start: 1842299
End: 1842688
Strand: Direct
Name: 146299351
Synonym: Fjoh_1591
Alternate gene names: NA
Gene position: 1842299-1842688 (Clockwise)
Preceding gene: 146299350
Following gene: 146299353
Centisome position: 30.22
GC content: 31.28
Gene sequence:
>390_bases ATGAGTTCAATATTCACTAAAATAGTAAACGGAGAAATTCCTGCCTATAAAATAGCCGAAGATGATAACTATCTGGCTTT TTTAGATGTAAATCCAAACGCAAAAGGTCATACACTTTGTATTCCGAAACAAGAAATCGACAAGATTTTTGATATGGATG AAGAATTGTATTTAGGATTAATGAAATTCTCTAAAAAAATTGCAGCAGCATTAGAAAAAACAGTTCCTTGTAAAAGAATT GGAATTGCGGTTGTAGGTTTAGAAGTTCCTCATGCACACGTACATTTAATTCCATTAAATCATATGGATGAAATGCGTTT TCAGGACAAAGTTTCGCTTTCAAAAGAAGAATTTGAAGCTTTAGCAAAAGATATTCAGTCTAATCTTTAA
Upstream 100 bases:
>100_bases GAACTTTGAAATTCGAAATTCTTGAAATTACAAGAGAATAAATTTTTTATAGTTTAACCGTTAAATCGGTTAAGCGGTTA ACCAGTTAAACGAATAAACT
Downstream 100 bases:
>100_bases GATTAAAACCAAAATAAAAAACACCAATTCAGTTAATGAGTTGGTGTTTTTTTATGTCTAATTTTTAAGCCGGACTGGTA GTTTCATAAGTAATCTGAAA
Product: histidine triad (HIT) protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSSIFTKIVNGEIPAYKIAEDDNYLAFLDVNPNAKGHTLCIPKQEIDKIFDMDEELYLGLMKFSKKIAAALEKTVPCKRI GIAVVGLEVPHAHVHLIPLNHMDEMRFQDKVSLSKEEFEALAKDIQSNL
Sequences:
>Translated_129_residues MSSIFTKIVNGEIPAYKIAEDDNYLAFLDVNPNAKGHTLCIPKQEIDKIFDMDEELYLGLMKFSKKIAAALEKTVPCKRI GIAVVGLEVPHAHVHLIPLNHMDEMRFQDKVSLSKEEFEALAKDIQSNL >Mature_128_residues SSIFTKIVNGEIPAYKIAEDDNYLAFLDVNPNAKGHTLCIPKQEIDKIFDMDEELYLGLMKFSKKIAAALEKTVPCKRIG IAVVGLEVPHAHVHLIPLNHMDEMRFQDKVSLSKEEFEALAKDIQSNL
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320078, Length=98, Percent_Identity=37.7551020408163, Blast_Score=67, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: NA
Molecular weight: Translated: 14540; Mature: 14409
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIFTKIVNGEIPAYKIAEDDNYLAFLDVNPNAKGHTLCIPKQEIDKIFDMDEELYLGL CCHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCEEECCHHHHHHHHCCCHHHHHHH MKFSKKIAAALEKTVPCKRIGIAVVGLEVPHAHVHLIPLNHMDEMRFQDKVSLSKEEFEA HHHHHHHHHHHHHCCCHHHHCEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCHHHHHH LAKDIQSNL HHHHHHHCC >Mature Secondary Structure SSIFTKIVNGEIPAYKIAEDDNYLAFLDVNPNAKGHTLCIPKQEIDKIFDMDEELYLGL CHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCEEECCHHHHHHHHCCCHHHHHHH MKFSKKIAAALEKTVPCKRIGIAVVGLEVPHAHVHLIPLNHMDEMRFQDKVSLSKEEFEA HHHHHHHHHHHHHCCCHHHHCEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCHHHHHH LAKDIQSNL HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]