| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is nadR [C]
Identifier: 146299346
GI number: 146299346
Start: 1836216
End: 1838330
Strand: Direct
Name: nadR [C]
Synonym: Fjoh_1586
Alternate gene names: 146299346
Gene position: 1836216-1838330 (Clockwise)
Preceding gene: 146299345
Following gene: 146299347
Centisome position: 30.12
GC content: 31.35
Gene sequence:
>2115_bases ATGGAGAAAAATCTTAGACAGCAAAAAACAAATATCATAAAAATTGCTTTGTTTGGCCCTGAAAGTACAGGTAAAACTAC ATTAGCAAAACAACTCGCAGACCACTACAAAACAGAATGGGTTCCAGAGTTTGCACGCGATTATCTGCAGGAAAGATGGG AAGAAAATCAGCATATATGTACTGTTGATGATATGATGCCTATTGCTTACGGGCAAGTTTTATTAGAGAATGAGAAGCTT ACCGAGGCGAATAAATATTTGTTTTGCGATACTAATTTAATGGTAACTAAAGTCTTCTCTGAAGTGTATTACGGTTTTTG TGATCCACTTTTAAATGAAGCTGCCTTAGAACATGATTACGATTTGTTTTTCCTCACGGATATTGATGTTCCATGGGAAA AAGATGACATTAGAGATACTCCGGAAGGAAGAGAAACCGTTTTTTCTGTATTCAAACAAACTTTAATTGATAATAAAAAG CCTTTTATAACCTTATCAGGTAATAAAGAAAGTCGTTTGGCAAAAGCTATAATGATTATAGATGCTTTAGGTGCTTTAAA AGAAAAAGGATTTTCTTCTCAGGATTTTGTTGAAATTTATAATCACGGAATTCCTTTCGAAAATATTTTAAAACAGCTGG ATATATTCAAAAACGGAATAGCAAAGAGCAGCTTGATTCGTCCAGCGACAATCAATAATGGCATTCTTAGTTTATCAGAA GTTGATTTTAAAGAAAAAGCTTCTTTTTTTGATAAACATAAAGAAGAATTTAAAATTAAAAAATTTGTTCCGGCTTCTGG TGCTGCTACCAGAATGTATAAGTTTTTAACGGCCTTTTTAAATGATTTTGATATTGAAAAAGAAACCATAAATGCTTATA TCAATAGGAAAAAAGATAAAGAACTAGCCATTTTTATTATTGGAATGGATAAGTTTCCTTTTTTTGATGATGTTGACAAA AAACTGAGAGAACTTTATCCAGATTTTGAAAACCTGGAAAGAGATTATAAAAACTATTATTTTATAAAACTGTTATTATC TCCTGAACATTTTAACTCGGCAAACAAGCCAAAAGCAGTTTTACCATTTCATTTATATAAAACTCATATAGCAACACCTA TAGAAGAACATTTAAATGAATGTGTGCATTATGCAACAGCAAAGCGTATTTCGAATTTACATTTTACAGTTTCAGAAATA CATCAGAATTTGTTTGAAAAAACAGTCGATGCAGTTAAAAACAAAGTAGAGGAACATTCTAATGTTAAAATTAACATTAG ATATTCTTATCAAAATAAAGGTACAGATTCAATTAATGTAGATGTAAATAATAAACTGGTGAGAAGTTCAAATGGAAGTC TGGTTTTTAGACCCGGCGGACATGGTGCTTTAATTGAAAACCTGAATAATCTGGATTCAGACATTATTTTTATTAAAAAT ATTGATAATGTAATTCAAAATCATATTGATAAAATTGCTTTATATAAAAAGGCTTTAGGAGGAATTTTAATTGAAGTACA GCAAAAAGTATTTGGATATTTAAAAGCAATTGAAAAAAATGAAGTGAAAGAAGAGGATCTTAAAGAAATCGTTGATGTTT TAATGCAAAAACTAAACATTCAGATGACTAAAGATTTCAATAAATTTACTTTTGAGAATAAAATCACCAAAATTAAAGAA CTGTTAGATCGTCCAATACGAGTTTGCGGAATGGTTCGAAATGAGGGAGAACCTGGCGGAGGACCGTTTTGGGTAATGAA CGATAAAGGCGAGGTCTCTTTGCAGATTGTAGAAACATCACAGGTAGATTTAGCAAATAAAAAACAGCTTGAAGTTCTAG AAGAAGCTACGCATTTTAACCCGGTAGATTTGGTTTGCGGAATCAAAAATTATAAAGGAGAAAAGTTTGACCTGAAAAAA TTTGTTGACGAAAAATCGGGATTTATAGTTGAAAAAAGTGTTGAAGGGAAAGCCGTAAAAAGTTATGAACTTCCGGGATT ATGGAATGGTTCGATGGCAAATTGGCTGACAGTTTTTGTTGCTGTGCCTTTAATTACTTTTAATCCGGTAAAAACGGTAA ACGATTTATTAAAACCGGCACATCAGCCACAATAA
Upstream 100 bases:
>100_bases GCGATATTATTGTAGTGCCTCTTTATGCCTATCGCGGCTTGGGGATGTTGTCGCTTCAATATTTAATTTTTACAATTTTA GCTATTTCAGCTTATTTAGA
Downstream 100 bases:
>100_bases TGGATAACGAGAAAATCATATCAGAATTAAACTTTAAAGCCGTTCGAAGCAGTGGTGCGGGCGGGCAGAACGTAAACAAA GTTTCGTCAAAAGTTGTTTT
Product: NAD metabolism ATPase/kinase-like protein
Products: NAD; pyrophosphate [C]
Alternate protein names: None
Number of amino acids: Translated: 704; Mature: 704
Protein sequence:
>704_residues MEKNLRQQKTNIIKIALFGPESTGKTTLAKQLADHYKTEWVPEFARDYLQERWEENQHICTVDDMMPIAYGQVLLENEKL TEANKYLFCDTNLMVTKVFSEVYYGFCDPLLNEAALEHDYDLFFLTDIDVPWEKDDIRDTPEGRETVFSVFKQTLIDNKK PFITLSGNKESRLAKAIMIIDALGALKEKGFSSQDFVEIYNHGIPFENILKQLDIFKNGIAKSSLIRPATINNGILSLSE VDFKEKASFFDKHKEEFKIKKFVPASGAATRMYKFLTAFLNDFDIEKETINAYINRKKDKELAIFIIGMDKFPFFDDVDK KLRELYPDFENLERDYKNYYFIKLLLSPEHFNSANKPKAVLPFHLYKTHIATPIEEHLNECVHYATAKRISNLHFTVSEI HQNLFEKTVDAVKNKVEEHSNVKINIRYSYQNKGTDSINVDVNNKLVRSSNGSLVFRPGGHGALIENLNNLDSDIIFIKN IDNVIQNHIDKIALYKKALGGILIEVQQKVFGYLKAIEKNEVKEEDLKEIVDVLMQKLNIQMTKDFNKFTFENKITKIKE LLDRPIRVCGMVRNEGEPGGGPFWVMNDKGEVSLQIVETSQVDLANKKQLEVLEEATHFNPVDLVCGIKNYKGEKFDLKK FVDEKSGFIVEKSVEGKAVKSYELPGLWNGSMANWLTVFVAVPLITFNPVKTVNDLLKPAHQPQ
Sequences:
>Translated_704_residues MEKNLRQQKTNIIKIALFGPESTGKTTLAKQLADHYKTEWVPEFARDYLQERWEENQHICTVDDMMPIAYGQVLLENEKL TEANKYLFCDTNLMVTKVFSEVYYGFCDPLLNEAALEHDYDLFFLTDIDVPWEKDDIRDTPEGRETVFSVFKQTLIDNKK PFITLSGNKESRLAKAIMIIDALGALKEKGFSSQDFVEIYNHGIPFENILKQLDIFKNGIAKSSLIRPATINNGILSLSE VDFKEKASFFDKHKEEFKIKKFVPASGAATRMYKFLTAFLNDFDIEKETINAYINRKKDKELAIFIIGMDKFPFFDDVDK KLRELYPDFENLERDYKNYYFIKLLLSPEHFNSANKPKAVLPFHLYKTHIATPIEEHLNECVHYATAKRISNLHFTVSEI HQNLFEKTVDAVKNKVEEHSNVKINIRYSYQNKGTDSINVDVNNKLVRSSNGSLVFRPGGHGALIENLNNLDSDIIFIKN IDNVIQNHIDKIALYKKALGGILIEVQQKVFGYLKAIEKNEVKEEDLKEIVDVLMQKLNIQMTKDFNKFTFENKITKIKE LLDRPIRVCGMVRNEGEPGGGPFWVMNDKGEVSLQIVETSQVDLANKKQLEVLEEATHFNPVDLVCGIKNYKGEKFDLKK FVDEKSGFIVEKSVEGKAVKSYELPGLWNGSMANWLTVFVAVPLITFNPVKTVNDLLKPAHQPQ >Mature_704_residues MEKNLRQQKTNIIKIALFGPESTGKTTLAKQLADHYKTEWVPEFARDYLQERWEENQHICTVDDMMPIAYGQVLLENEKL TEANKYLFCDTNLMVTKVFSEVYYGFCDPLLNEAALEHDYDLFFLTDIDVPWEKDDIRDTPEGRETVFSVFKQTLIDNKK PFITLSGNKESRLAKAIMIIDALGALKEKGFSSQDFVEIYNHGIPFENILKQLDIFKNGIAKSSLIRPATINNGILSLSE VDFKEKASFFDKHKEEFKIKKFVPASGAATRMYKFLTAFLNDFDIEKETINAYINRKKDKELAIFIIGMDKFPFFDDVDK KLRELYPDFENLERDYKNYYFIKLLLSPEHFNSANKPKAVLPFHLYKTHIATPIEEHLNECVHYATAKRISNLHFTVSEI HQNLFEKTVDAVKNKVEEHSNVKINIRYSYQNKGTDSINVDVNNKLVRSSNGSLVFRPGGHGALIENLNNLDSDIIFIKN IDNVIQNHIDKIALYKKALGGILIEVQQKVFGYLKAIEKNEVKEEDLKEIVDVLMQKLNIQMTKDFNKFTFENKITKIKE LLDRPIRVCGMVRNEGEPGGGPFWVMNDKGEVSLQIVETSQVDLANKKQLEVLEEATHFNPVDLVCGIKNYKGEKFDLKK FVDEKSGFIVEKSVEGKAVKSYELPGLWNGSMANWLTVFVAVPLITFNPVKTVNDLLKPAHQPQ
Specific function: NADr Is Bifunctional; It Interacts With Pnuc At Low Internal NAD Levels, Permitting Transport Of Nmn Intact Into The Cell. As NAD Levels Increase Within The Cell, The Affinity Of NADr For The Operator Regions Of NADa, NADb, And Pncb Increases, Repressing
COG id: COG3172
COG function: function code H; Predicted ATPase/kinase involved in NAD metabolism
Gene ontology:
Cell location: May Loosely Associate With The Membrane Through Its Interaction With The Membrane-Bound Pnuc [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082440, Length=124, Percent_Identity=30.6451612903226, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80956; Mature: 80956
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKNLRQQKTNIIKIALFGPESTGKTTLAKQLADHYKTEWVPEFARDYLQERWEENQHIC CCCCHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEE TVDDMMPIAYGQVLLENEKLTEANKYLFCDTNLMVTKVFSEVYYGFCDPLLNEAALEHDY EHHHCCHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC DLFFLTDIDVPWEKDDIRDTPEGRETVFSVFKQTLIDNKKPFITLSGNKESRLAKAIMII CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHH DALGALKEKGFSSQDFVEIYNHGIPFENILKQLDIFKNGIAKSSLIRPATINNGILSLSE HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEHHH VDFKEKASFFDKHKEEFKIKKFVPASGAATRMYKFLTAFLNDFDIEKETINAYINRKKDK CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC ELAIFIIGMDKFPFFDDVDKKLRELYPDFENLERDYKNYYFIKLLLSPEHFNSANKPKAV EEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEEECCHHCCCCCCCCEE LPFHLYKTHIATPIEEHLNECVHYATAKRISNLHFTVSEIHQNLFEKTVDAVKNKVEEHS ECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHCC NVKINIRYSYQNKGTDSINVDVNNKLVRSSNGSLVFRPGGHGALIENLNNLDSDIIFIKN CEEEEEEEEECCCCCCEEEEECCCCEEECCCCCEEEECCCCCHHHHHHCCCCCCEEEEEC IDNVIQNHIDKIALYKKALGGILIEVQQKVFGYLKAIEKNEVKEEDLKEIVDVLMQKLNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC QMTKDFNKFTFENKITKIKELLDRPIRVCGMVRNEGEPGGGPFWVMNDKGEVSLQIVETS EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEEC QVDLANKKQLEVLEEATHFNPVDLVCGIKNYKGEKFDLKKFVDEKSGFIVEKSVEGKAVK CCCCCCHHHHHHHHHHHCCCCHHEEECCCCCCCCCCHHHHHHCCCCCEEEEECCCCCEEE SYELPGLWNGSMANWLTVFVAVPLITFNPVKTVNDLLKPAHQPQ CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MEKNLRQQKTNIIKIALFGPESTGKTTLAKQLADHYKTEWVPEFARDYLQERWEENQHIC CCCCHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEE TVDDMMPIAYGQVLLENEKLTEANKYLFCDTNLMVTKVFSEVYYGFCDPLLNEAALEHDY EHHHCCHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC DLFFLTDIDVPWEKDDIRDTPEGRETVFSVFKQTLIDNKKPFITLSGNKESRLAKAIMII CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHH DALGALKEKGFSSQDFVEIYNHGIPFENILKQLDIFKNGIAKSSLIRPATINNGILSLSE HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEHHH VDFKEKASFFDKHKEEFKIKKFVPASGAATRMYKFLTAFLNDFDIEKETINAYINRKKDK CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC ELAIFIIGMDKFPFFDDVDKKLRELYPDFENLERDYKNYYFIKLLLSPEHFNSANKPKAV EEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEEECCHHCCCCCCCCEE LPFHLYKTHIATPIEEHLNECVHYATAKRISNLHFTVSEIHQNLFEKTVDAVKNKVEEHS ECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHCC NVKINIRYSYQNKGTDSINVDVNNKLVRSSNGSLVFRPGGHGALIENLNNLDSDIIFIKN CEEEEEEEEECCCCCCEEEEECCCCEEECCCCCEEEECCCCCHHHHHHCCCCCCEEEEEC IDNVIQNHIDKIALYKKALGGILIEVQQKVFGYLKAIEKNEVKEEDLKEIVDVLMQKLNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC QMTKDFNKFTFENKITKIKELLDRPIRVCGMVRNEGEPGGGPFWVMNDKGEVSLQIVETS EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEEC QVDLANKKQLEVLEEATHFNPVDLVCGIKNYKGEKFDLKKFVDEKSGFIVEKSVEGKAVK CCCCCCHHHHHHHHHHHCCCCHHEEECCCCCCCCCCHHHHHHCCCCCEEEEECCCCCEEE SYELPGLWNGSMANWLTVFVAVPLITFNPVKTVNDLLKPAHQPQ CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: nicotinamide nucleotide; ATP [C]
Specific reaction: nicotinamide nucleotide + ATP = NAD + pyrophosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA