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The map label for this gene is yaeJ [C]

Identifier: 146299347

GI number: 146299347

Start: 1838330

End: 1838731

Strand: Direct

Name: yaeJ [C]

Synonym: Fjoh_1587

Alternate gene names: 146299347

Gene position: 1838330-1838731 (Clockwise)

Preceding gene: 146299346

Following gene: 146299348

Centisome position: 30.15

GC content: 32.34

Gene sequence:

>402_bases
ATGGATAACGAGAAAATCATATCAGAATTAAACTTTAAAGCCGTTCGAAGCAGTGGTGCGGGCGGGCAGAACGTAAACAA
AGTTTCGTCAAAAGTTGTTTTGTCTTTTGATTTAGAAGCTTCTCAAGCCTTGTCTGATGATGAAAAAACACTTCTAAAAG
AGAATTTATCAGCTCGTTTAACTTCTGAAAATATATTAATATTAAATTGCGACGAAGATCGAAGCCAGCTTAAGAATAAG
GAAATTGTTGTGAAGCGATTTCTAGAATTAATTAAAAAAGGATTATATGTTCCAAAAGTTCGAAAAGCTACAAAAGTTCC
CAAAGCTGTAATCAAAAAAAGAATTAAAGACAAAAAGAATATCTCTGATTTAAAACAGTCCCGAAGAAAACCTGATTTTT
AG

Upstream 100 bases:

>100_bases
TGGCAAATTGGCTGACAGTTTTTGTTGCTGTGCCTTTAATTACTTTTAATCCGGTAAAAACGGTAAACGATTTATTAAAA
CCGGCACATCAGCCACAATA

Downstream 100 bases:

>100_bases
TATAAAGACTACAGAATTAAGTATTAAGAAATCCAAAAGTGAAAAATCGTAATACCTAATACATTTATCTTAATACTTTT
CTATATTTGCATTGTCTCAA

Product: protein chain release factor B-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MDNEKIISELNFKAVRSSGAGGQNVNKVSSKVVLSFDLEASQALSDDEKTLLKENLSARLTSENILILNCDEDRSQLKNK
EIVVKRFLELIKKGLYVPKVRKATKVPKAVIKKRIKDKKNISDLKQSRRKPDF

Sequences:

>Translated_133_residues
MDNEKIISELNFKAVRSSGAGGQNVNKVSSKVVLSFDLEASQALSDDEKTLLKENLSARLTSENILILNCDEDRSQLKNK
EIVVKRFLELIKKGLYVPKVRKATKVPKAVIKKRIKDKKNISDLKQSRRKPDF
>Mature_133_residues
MDNEKIISELNFKAVRSSGAGGQNVNKVSSKVVLSFDLEASQALSDDEKTLLKENLSARLTSENILILNCDEDRSQLKNK
EIVVKRFLELIKKGLYVPKVRKATKVPKAVIKKRIKDKKNISDLKQSRRKPDF

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=122, Percent_Identity=33.6065573770492, Blast_Score=67, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15070; Mature: 15070

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNEKIISELNFKAVRSSGAGGQNVNKVSSKVVLSFDLEASQALSDDEKTLLKENLSARL
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEECCCHHHHCCCHHHHHHHHHHHHEE
TSENILILNCDEDRSQLKNKEIVVKRFLELIKKGLYVPKVRKATKVPKAVIKKRIKDKKN
CCCCEEEEECCCHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHCCCC
ISDLKQSRRKPDF
HHHHHHHHCCCCC
>Mature Secondary Structure
MDNEKIISELNFKAVRSSGAGGQNVNKVSSKVVLSFDLEASQALSDDEKTLLKENLSARL
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEECCCHHHHCCCHHHHHHHHHHHHEE
TSENILILNCDEDRSQLKNKEIVVKRFLELIKKGLYVPKVRKATKVPKAVIKKRIKDKKN
CCCCEEEEECCCHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHCCCC
ISDLKQSRRKPDF
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]