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The map label for this gene is 146299326

Identifier: 146299326

GI number: 146299326

Start: 1818815

End: 1820239

Strand: Direct

Name: 146299326

Synonym: Fjoh_1566

Alternate gene names: NA

Gene position: 1818815-1820239 (Clockwise)

Preceding gene: 146299325

Following gene: 146299327

Centisome position: 29.83

GC content: 34.6

Gene sequence:

>1425_bases
ATGATAAACATCAACAAAAAACTTCAAATCCTGCTTTTACTGCCGCTTATTGCTGTGCAGATAAAGTGCGGATCTTCAAA
AAATGCTGTTTCCAATTCTGATAAAGCAGAATCCTGGATAACAACAACAGATGAAACTTCAAAACTGAAAAAACAAGAAG
ACTTAGTTTTTAATTCAGAAATTAATTCAAACCAGACTATTGAGATTGATCCCTCTCAAAAATTCCAAACCATAGAAGGT
TTTGGTTTTTCGTTAACAGGAGGAAGCGCGCAGGCAATCATGAAATTGGATAAAACCAAAAAAGAAGCCCTGCTTCAGGA
ATTATTTTCAAGAAAAGGCGATGCAATTGGTTTGAGTTACCTTAGAATTAGTATTGGAGCATCTGATTTGAATGAGAAAG
TTTTTTCATATGATGATATGCCGGAAGGACAAACAGATTTAAAATTAGAACATTTCAATTTAGGTCCGGATTTAAACGAT
GTGATTCCGGTTTTACAGGATATCTTAAAAATAAATCCTAAGATAAAAATAATGGGATCGCCTTGGTCACCTCCGGTTTG
GATGAAAGACAACGGAAGTTCTAAAGCAGGAAGTTTACAGCCCAAATACTATGAAGTATATGCTCAGTATTTTGTAAAAT
ATATTCAGGCGATGAAATCACATGGAATTATTATTGATGCTATTACACCTCAAAATGAGCCATTACATCCCGGAAACAAT
CCAAGTTTATTAATGCTGGCAGAACAGCAGGCAGATTTTGTAGGAAATCATTTAGGACCGGCATTTAAAGCAGCAGGAAT
TAAAACCAAAATTATTGTTTACGACCATAATTGTAACAAACCCGAATATCCTTTGACTATTTTAAGAGACAGCAAAGCCA
ATCCTTTTGTGGCTGGTTCAGCTTTTCATTTATATGAAGGAGACATTAGTGCTTTATCAACCGTTCATAATGAATTTCCA
GATAAAGATTTATATTTTACAGAACAATATACAGGATCAAAAAGCAGTTTTGAAAACGATTTGAAATGGAGCGTCAAAAA
TGTTGTAATTGGTTCAATGCGTAATTGGAGTAAAAATGCCCTTTCATGGGGATTAGCAAACGATGAGTATTACAAACCTT
TTACACCGGGCGGATGCTCAACTTGTAAAGGGGCATTAATGATTGATCAAAATCAGAATATTAAAAGAGAAGTAGGATAT
TATATTATAGGCCATGCTTCTAAATTTGTTCCAGAAGGTTCAGTGAGAATAGGAAGTAATGTAAGCGGAAACCTTTATAA
TGTTGCTTTTAAAACACCACAGGGAAAAATTGTTTTGATCGTAGAAAATGATGGAGCTTCAGCAGAAACATTCAATATTA
AATACAATCAAAAACAAATCGCAACCACATTAAACGCTGGTGCAGCAGCTACCTACGTTTGGTAA

Upstream 100 bases:

>100_bases
AACAGCGGACTAACAGTTCAAAAACATGCAGTGCTGAGTGATTCGAAAGATTTAAAATATCCGTCGGACCATTTGCCTGT
TTTTATAGAAATAGATTAAA

Downstream 100 bases:

>100_bases
AAACTTAAACTATGAAAAAAGTAACCACAATTACTCTGTTTATGCTTTCGCTTTTTGCGTCGGCACAGCAGCAAACAATA
GATCAAAAAGTAAATGATCT

Product: glucan endo-1,6-beta-glucosidase

Products: NA

Alternate protein names: Glucan Endo-1 6-Beta-Glucosidase; Glycoside Hydrolase Family; O-Glycosyl Hydrolase Family; Glycoside Hydrolase Family Protein; O-Glycosyl Hydrolase; Glycosyl Hydrolase; Ricin B Lectin; O-Glycosyl Hydrolase Family Protein; Glucuronoarabinoxylan Endo-1 4-Beta-Xylanase; Glycoside Hydrolase; Lysosomal Glucosyl Ceramidase-Like Protein; Glycosy Hydrolase Family Protein; Glucan EndO-1 6-Beta-Glucosidase; Xylan Degradation Protein; Beta-Glycosidase; Glycoside Hydrolase Family 5 Domain Protein; Helix-Turn-Helix AraC Type; Glycosyl Hydrolase Family; LPXTG-Motif Cell Wall Anchor Domain Protein; Glycosyl Hydrolases Family; Endo-1 6-Beta-D-Glucanase; Xylanase; Cellulosome Protein Dockerin Type I

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MININKKLQILLLLPLIAVQIKCGSSKNAVSNSDKAESWITTTDETSKLKKQEDLVFNSEINSNQTIEIDPSQKFQTIEG
FGFSLTGGSAQAIMKLDKTKKEALLQELFSRKGDAIGLSYLRISIGASDLNEKVFSYDDMPEGQTDLKLEHFNLGPDLND
VIPVLQDILKINPKIKIMGSPWSPPVWMKDNGSSKAGSLQPKYYEVYAQYFVKYIQAMKSHGIIIDAITPQNEPLHPGNN
PSLLMLAEQQADFVGNHLGPAFKAAGIKTKIIVYDHNCNKPEYPLTILRDSKANPFVAGSAFHLYEGDISALSTVHNEFP
DKDLYFTEQYTGSKSSFENDLKWSVKNVVIGSMRNWSKNALSWGLANDEYYKPFTPGGCSTCKGALMIDQNQNIKREVGY
YIIGHASKFVPEGSVRIGSNVSGNLYNVAFKTPQGKIVLIVENDGASAETFNIKYNQKQIATTLNAGAAATYVW

Sequences:

>Translated_474_residues
MININKKLQILLLLPLIAVQIKCGSSKNAVSNSDKAESWITTTDETSKLKKQEDLVFNSEINSNQTIEIDPSQKFQTIEG
FGFSLTGGSAQAIMKLDKTKKEALLQELFSRKGDAIGLSYLRISIGASDLNEKVFSYDDMPEGQTDLKLEHFNLGPDLND
VIPVLQDILKINPKIKIMGSPWSPPVWMKDNGSSKAGSLQPKYYEVYAQYFVKYIQAMKSHGIIIDAITPQNEPLHPGNN
PSLLMLAEQQADFVGNHLGPAFKAAGIKTKIIVYDHNCNKPEYPLTILRDSKANPFVAGSAFHLYEGDISALSTVHNEFP
DKDLYFTEQYTGSKSSFENDLKWSVKNVVIGSMRNWSKNALSWGLANDEYYKPFTPGGCSTCKGALMIDQNQNIKREVGY
YIIGHASKFVPEGSVRIGSNVSGNLYNVAFKTPQGKIVLIVENDGASAETFNIKYNQKQIATTLNAGAAATYVW
>Mature_474_residues
MININKKLQILLLLPLIAVQIKCGSSKNAVSNSDKAESWITTTDETSKLKKQEDLVFNSEINSNQTIEIDPSQKFQTIEG
FGFSLTGGSAQAIMKLDKTKKEALLQELFSRKGDAIGLSYLRISIGASDLNEKVFSYDDMPEGQTDLKLEHFNLGPDLND
VIPVLQDILKINPKIKIMGSPWSPPVWMKDNGSSKAGSLQPKYYEVYAQYFVKYIQAMKSHGIIIDAITPQNEPLHPGNN
PSLLMLAEQQADFVGNHLGPAFKAAGIKTKIIVYDHNCNKPEYPLTILRDSKANPFVAGSAFHLYEGDISALSTVHNEFP
DKDLYFTEQYTGSKSSFENDLKWSVKNVVIGSMRNWSKNALSWGLANDEYYKPFTPGGCSTCKGALMIDQNQNIKREVGY
YIIGHASKFVPEGSVRIGSNVSGNLYNVAFKTPQGKIVLIVENDGASAETFNIKYNQKQIATTLNAGAAATYVW

Specific function: Unknown

COG id: COG5520

COG function: function code M; O-Glycosyl hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI54607043, Length=469, Percent_Identity=27.7185501066098, Blast_Score=155, Evalue=9e-38,
Organism=Homo sapiens, GI54607045, Length=469, Percent_Identity=27.7185501066098, Blast_Score=155, Evalue=9e-38,
Organism=Homo sapiens, GI54607047, Length=469, Percent_Identity=27.7185501066098, Blast_Score=155, Evalue=9e-38,
Organism=Homo sapiens, GI284807150, Length=453, Percent_Identity=28.2560706401766, Blast_Score=155, Evalue=1e-37,
Organism=Homo sapiens, GI284807152, Length=396, Percent_Identity=27.5252525252525, Blast_Score=127, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI193204210, Length=428, Percent_Identity=28.9719626168224, Blast_Score=160, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17542884, Length=410, Percent_Identity=29.0243902439024, Blast_Score=159, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI115532472, Length=434, Percent_Identity=27.1889400921659, Blast_Score=148, Evalue=7e-36,
Organism=Caenorhabditis elegans, GI115532470, Length=434, Percent_Identity=27.1889400921659, Blast_Score=148, Evalue=8e-36,
Organism=Caenorhabditis elegans, GI17539758, Length=401, Percent_Identity=28.927680798005, Blast_Score=144, Evalue=9e-35,
Organism=Caenorhabditis elegans, GI17539756, Length=400, Percent_Identity=28.25, Blast_Score=138, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI25151335, Length=300, Percent_Identity=30.6666666666667, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI161078544, Length=429, Percent_Identity=28.2051282051282, Blast_Score=131, Evalue=8e-31,
Organism=Drosophila melanogaster, GI21355305, Length=425, Percent_Identity=27.2941176470588, Blast_Score=124, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52449; Mature: 52449

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MININKKLQILLLLPLIAVQIKCGSSKNAVSNSDKAESWITTTDETSKLKKQEDLVFNSE
CCCCCCHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCEECCCHHHHHHHHHCEEEECC
INSNQTIEIDPSQKFQTIEGFGFSLTGGSAQAIMKLDKTKKEALLQELFSRKGDAIGLSY
CCCCCEEEECCCCCEEHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
LRISIGASDLNEKVFSYDDMPEGQTDLKLEHFNLGPDLNDVIPVLQDILKINPKIKIMGS
EEEEECCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEC
PWSPPVWMKDNGSSKAGSLQPKYYEVYAQYFVKYIQAMKSHGIIIDAITPQNEPLHPGNN
CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCC
PSLLMLAEQQADFVGNHLGPAFKAAGIKTKIIVYDHNCNKPEYPLTILRDSKANPFVAGS
CCEEEEECCCHHHHHHHCCCHHHHCCCEEEEEEEECCCCCCCCCEEEEECCCCCCEEECC
AFHLYEGDISALSTVHNEFPDKDLYFTEQYTGSKSSFENDLKWSVKNVVIGSMRNWSKNA
EEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEHEEEECCCCCCCHH
LSWGLANDEYYKPFTPGGCSTCKGALMIDQNQNIKREVGYYIIGHASKFVPEGSVRIGSN
HEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHCCEEEEECCHHCCCCCCEEECCC
VSGNLYNVAFKTPQGKIVLIVENDGASAETFNIKYNQKQIATTLNAGAAATYVW
CCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEEECCHHHHHHHCCCCEEEECC
>Mature Secondary Structure
MININKKLQILLLLPLIAVQIKCGSSKNAVSNSDKAESWITTTDETSKLKKQEDLVFNSE
CCCCCCHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCEECCCHHHHHHHHHCEEEECC
INSNQTIEIDPSQKFQTIEGFGFSLTGGSAQAIMKLDKTKKEALLQELFSRKGDAIGLSY
CCCCCEEEECCCCCEEHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
LRISIGASDLNEKVFSYDDMPEGQTDLKLEHFNLGPDLNDVIPVLQDILKINPKIKIMGS
EEEEECCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEC
PWSPPVWMKDNGSSKAGSLQPKYYEVYAQYFVKYIQAMKSHGIIIDAITPQNEPLHPGNN
CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCC
PSLLMLAEQQADFVGNHLGPAFKAAGIKTKIIVYDHNCNKPEYPLTILRDSKANPFVAGS
CCEEEEECCCHHHHHHHCCCHHHHCCCEEEEEEEECCCCCCCCCEEEEECCCCCCEEECC
AFHLYEGDISALSTVHNEFPDKDLYFTEQYTGSKSSFENDLKWSVKNVVIGSMRNWSKNA
EEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEHEEEECCCCCCCHH
LSWGLANDEYYKPFTPGGCSTCKGALMIDQNQNIKREVGYYIIGHASKFVPEGSVRIGSN
HEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHCCEEEEECCHHCCCCCCEEECCC
VSGNLYNVAFKTPQGKIVLIVENDGASAETFNIKYNQKQIATTLNAGAAATYVW
CCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEEECCHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA