| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is bglX [H]
Identifier: 146299327
GI number: 146299327
Start: 1820251
End: 1822482
Strand: Direct
Name: bglX [H]
Synonym: Fjoh_1567
Alternate gene names: 146299327
Gene position: 1820251-1822482 (Clockwise)
Preceding gene: 146299326
Following gene: 146299330
Centisome position: 29.86
GC content: 36.38
Gene sequence:
>2232_bases ATGAAAAAAGTAACCACAATTACTCTGTTTATGCTTTCGCTTTTTGCGTCGGCACAGCAGCAAACAATAGATCAAAAAGT AAATGATCTGTTGAAAAAAATGACTATTGAAGAAAAAATAGGCCAGCTAAACCAATACACTGGAGACAATCAGGCGACAG GTCCAATTACTATTAACCCAAACAAACAATCTGAAATCAAAGCCGGGTTAATTGGTTCGATGCTGAACATCATCGGAACA AAATATACCAGACAATATCAGGAACTGGCAATGCAGTCAAGATTAAAAATTCCGTTGTTATTTGGTCAGGATGTTATTCA CGGATACAAAACTACTTTTCCTCTGCCTTTAGCCGAAGCTGCCAGCTGGGATTTACAGGCAATTGAATTAGCGGCAAGAG TGGCTGCAACAGAAGCTTCTGCAAGCGGTATTCACTGGACATTTGCTCCAATGGTCGACATCAGCCGTGATCCAAGATGG GGACGTGTAATGGAAGGTGCAGGAGAAGATACTTATCTAGGTTCTAAAATTGCCTATGCAAGAGTAAAAGGTTTTCAGGG AAATAAATTAGGAGATCTAAATTCTGTAATGGCATGCGTAAAACACTTCGCAGCTTATGGAGCTGGAGTTGGCGGAAGAG ATTACAATTCTGTTGATATGAGCGAAAGAATGCTTTGGGAAACTTATTTACCGCCTTTTAAAGCAGCTTTAGACGCTGGT GCAGCAACATTCATGAATTCATTTAATGATATTAACGGAATTCCTGCAACTGGAAATGCACATTTACAACGTGATATTTT AAAAGGAAAATGGAACTTTCAGGGATTTGTAGTTTCTGACTGGGGTTCTATTGGCGAAATGGTAGCGCACGGTTATTCAA AAAACCTAAAAGAAGCCGCATACTCAGCTATTACAGCCGGAAGCGATATGGATATGGAAAGTAATGCTTACCGTTATAAT CTGGCACAATTAGTTAAAGAAGGAAGAGTTTCTGTTGATTTAATTGATGATGCTGTAAAACGTATTCTTCGCAAGAAATT TGAATTAGGTTTATTCGATGATCCTTACAGATATTCTGATGAGAAGAGAGCAGAAAAAGCTTTAAACAATCCGGAACACA GAAAGGCTGCTCTTGATGTTGCTCAAAAAAGTATTGTTTTATTAAAGAATGAAAACCAGACTTTACCAATATCTAAAAGC GTAAAAACGATTGCTTTCATTGGACCTATGGTAAAAGAATACAAAGAAAACATGGGATTCTGGTCTGTAGAACTTCCTGA AGTTGACTATAATAAATGGATTGTTTCTCAATGGGATGGCTTACAGAATAAAGTTGGCAAAAACACGAAGTTATTATATG CAAAAGGGTGTGAAATAGAAGGGACAAATAAAGATGGTTTTGCTGAAGCTGTTGAAACTGCAAAACAAGCCGATGTTGTA ATTTTAAGTATTGGAGAAAGACGTGACATGAGCGGTGAGGCAAAAAGCCGAAGCGATATTCATTTACCAGGCGTTCAGGA AGATTTAGTAAAAGCAATTCAGGCAACAGGAAAACCGGTTGTAGTTTTAATTAATGCTGGAAGACCTCTTGTTTTTAACT GGACTGCAGATAATGTTCCGGCAGTGGTATACACTTGGTGGTTAGGAACCGAAGCTGGAAATGCAATTGCTAATGTTTTA TTTGGAGATTATAATCCGTCAGGGAAATTACCAATGACTTTTCCTAGAGAAGTAGGACAAATTCCTATTTACTACAATCA TTTTAGTACAGGAAGACCAGCTAAAACAGAAAACGAAACCAATTATGTTTCGGCGTATATCGATTTAAAAAACTCACCTA AATTTCCTTTCGGATACGGTTTGAGCTATACACAATTTAGTTATTCTGATTTGAAACTTTCTTCAACAAAAATAAAAAGC AATGAAACCATTAAAGTTTCATTTAAACTTTCAAATGTTGGAAAAGTGGCAGGAGAAGAAGTAGCACAATTGTATTTAAA AGACAAATTTGGATCAGTGGTGCGTCCGGTTTTAGAATTAAGAGATTTCGAAAAAGTGAAATTAAATGCGGGTGAATCTA AAACTATTGAATTTACAATTGACAAAGAAAAACTTTCATTCTATAACGATAAACTAGAATGGACAACAGAACCTGGAGAT TTTGAACTTATGATTGGTTCTTCATCTGCAGATATTAAATTAAGATCAGATTTTGAATTACTTGAAAAGTAA
Upstream 100 bases:
>100_bases CTTCAGCAGAAACATTCAATATTAAATACAATCAAAAACAAATCGCAACCACATTAAACGCTGGTGCAGCAGCTACCTAC GTTTGGTAAAAACTTAAACT
Downstream 100 bases:
>100_bases TGAAATAAAAACGGGGCCTTTGAAAGCCCCGTTTTTTATATGTTATTATTTTAAACGTTTCTTGAAGCTGTATTTCAGCA TATTCAATAACCCTTGTTCA
Product: glycoside hydrolase family 3 protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 743; Mature: 743
Protein sequence:
>743_residues MKKVTTITLFMLSLFASAQQQTIDQKVNDLLKKMTIEEKIGQLNQYTGDNQATGPITINPNKQSEIKAGLIGSMLNIIGT KYTRQYQELAMQSRLKIPLLFGQDVIHGYKTTFPLPLAEAASWDLQAIELAARVAATEASASGIHWTFAPMVDISRDPRW GRVMEGAGEDTYLGSKIAYARVKGFQGNKLGDLNSVMACVKHFAAYGAGVGGRDYNSVDMSERMLWETYLPPFKAALDAG AATFMNSFNDINGIPATGNAHLQRDILKGKWNFQGFVVSDWGSIGEMVAHGYSKNLKEAAYSAITAGSDMDMESNAYRYN LAQLVKEGRVSVDLIDDAVKRILRKKFELGLFDDPYRYSDEKRAEKALNNPEHRKAALDVAQKSIVLLKNENQTLPISKS VKTIAFIGPMVKEYKENMGFWSVELPEVDYNKWIVSQWDGLQNKVGKNTKLLYAKGCEIEGTNKDGFAEAVETAKQADVV ILSIGERRDMSGEAKSRSDIHLPGVQEDLVKAIQATGKPVVVLINAGRPLVFNWTADNVPAVVYTWWLGTEAGNAIANVL FGDYNPSGKLPMTFPREVGQIPIYYNHFSTGRPAKTENETNYVSAYIDLKNSPKFPFGYGLSYTQFSYSDLKLSSTKIKS NETIKVSFKLSNVGKVAGEEVAQLYLKDKFGSVVRPVLELRDFEKVKLNAGESKTIEFTIDKEKLSFYNDKLEWTTEPGD FELMIGSSSADIKLRSDFELLEK
Sequences:
>Translated_743_residues MKKVTTITLFMLSLFASAQQQTIDQKVNDLLKKMTIEEKIGQLNQYTGDNQATGPITINPNKQSEIKAGLIGSMLNIIGT KYTRQYQELAMQSRLKIPLLFGQDVIHGYKTTFPLPLAEAASWDLQAIELAARVAATEASASGIHWTFAPMVDISRDPRW GRVMEGAGEDTYLGSKIAYARVKGFQGNKLGDLNSVMACVKHFAAYGAGVGGRDYNSVDMSERMLWETYLPPFKAALDAG AATFMNSFNDINGIPATGNAHLQRDILKGKWNFQGFVVSDWGSIGEMVAHGYSKNLKEAAYSAITAGSDMDMESNAYRYN LAQLVKEGRVSVDLIDDAVKRILRKKFELGLFDDPYRYSDEKRAEKALNNPEHRKAALDVAQKSIVLLKNENQTLPISKS VKTIAFIGPMVKEYKENMGFWSVELPEVDYNKWIVSQWDGLQNKVGKNTKLLYAKGCEIEGTNKDGFAEAVETAKQADVV ILSIGERRDMSGEAKSRSDIHLPGVQEDLVKAIQATGKPVVVLINAGRPLVFNWTADNVPAVVYTWWLGTEAGNAIANVL FGDYNPSGKLPMTFPREVGQIPIYYNHFSTGRPAKTENETNYVSAYIDLKNSPKFPFGYGLSYTQFSYSDLKLSSTKIKS NETIKVSFKLSNVGKVAGEEVAQLYLKDKFGSVVRPVLELRDFEKVKLNAGESKTIEFTIDKEKLSFYNDKLEWTTEPGD FELMIGSSSADIKLRSDFELLEK >Mature_743_residues MKKVTTITLFMLSLFASAQQQTIDQKVNDLLKKMTIEEKIGQLNQYTGDNQATGPITINPNKQSEIKAGLIGSMLNIIGT KYTRQYQELAMQSRLKIPLLFGQDVIHGYKTTFPLPLAEAASWDLQAIELAARVAATEASASGIHWTFAPMVDISRDPRW GRVMEGAGEDTYLGSKIAYARVKGFQGNKLGDLNSVMACVKHFAAYGAGVGGRDYNSVDMSERMLWETYLPPFKAALDAG AATFMNSFNDINGIPATGNAHLQRDILKGKWNFQGFVVSDWGSIGEMVAHGYSKNLKEAAYSAITAGSDMDMESNAYRYN LAQLVKEGRVSVDLIDDAVKRILRKKFELGLFDDPYRYSDEKRAEKALNNPEHRKAALDVAQKSIVLLKNENQTLPISKS VKTIAFIGPMVKEYKENMGFWSVELPEVDYNKWIVSQWDGLQNKVGKNTKLLYAKGCEIEGTNKDGFAEAVETAKQADVV ILSIGERRDMSGEAKSRSDIHLPGVQEDLVKAIQATGKPVVVLINAGRPLVFNWTADNVPAVVYTWWLGTEAGNAIANVL FGDYNPSGKLPMTFPREVGQIPIYYNHFSTGRPAKTENETNYVSAYIDLKNSPKFPFGYGLSYTQFSYSDLKLSSTKIKS NETIKVSFKLSNVGKVAGEEVAQLYLKDKFGSVVRPVLELRDFEKVKLNAGESKTIEFTIDKEKLSFYNDKLEWTTEPGD FELMIGSSSADIKLRSDFELLEK
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=747, Percent_Identity=44.0428380187416, Blast_Score=640, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 82617; Mature: 82617
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVTTITLFMLSLFASAQQQTIDQKVNDLLKKMTIEEKIGQLNQYTGDNQATGPITINP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECC NKQSEIKAGLIGSMLNIIGTKYTRQYQELAMQSRLKIPLLFGQDVIHGYKTTFPLPLAEA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCCCCHHH ASWDLQAIELAARVAATEASASGIHWTFAPMVDISRDPRWGRVMEGAGEDTYLGSKIAYA CCCCHHHHHHHHHHHHCCCCCCCCEEEEECEEECCCCCCCCHHHCCCCCCCCCCCCEEEE RVKGFQGNKLGDLNSVMACVKHFAAYGAGVGGRDYNSVDMSERMLWETYLPPFKAALDAG EECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH AATFMNSFNDINGIPATGNAHLQRDILKGKWNFQGFVVSDWGSIGEMVAHGYSKNLKEAA HHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH YSAITAGSDMDMESNAYRYNLAQLVKEGRVSVDLIDDAVKRILRKKFELGLFDDPYRYSD HHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCC EKRAEKALNNPEHRKAALDVAQKSIVLLKNENQTLPISKSVKTIAFIGPMVKEYKENMGF HHHHHHHHCCCHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCE WSVELPEVDYNKWIVSQWDGLQNKVGKNTKLLYAKGCEIEGTNKDGFAEAVETAKQADVV EEEECCCCCCCCHHHHHCCCHHHHCCCCCEEEEEECCEECCCCCCHHHHHHHHHHHCCEE ILSIGERRDMSGEAKSRSDIHLPGVQEDLVKAIQATGKPVVVLINAGRPLVFNWTADNVP EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCC AVVYTWWLGTEAGNAIANVLFGDYNPSGKLPMTFPREVGQIPIYYNHFSTGRPAKTENET EEEEEEEECCCCCCHHHHHEECCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCC NYVSAYIDLKNSPKFPFGYGLSYTQFSYSDLKLSSTKIKSNETIKVSFKLSNVGKVAGEE CEEEEEEEECCCCCCCCCCCCCCCEECCCCEEEECEEECCCCEEEEEEEECCCCHHHHHH VAQLYLKDKFGSVVRPVLELRDFEKVKLNAGESKTIEFTIDKEKLSFYNDKLEWTTEPGD HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEHHHHHHHCCCEEEECCCCC FELMIGSSSADIKLRSDFELLEK EEEEEECCCCCEEECCCHHHHCC >Mature Secondary Structure MKKVTTITLFMLSLFASAQQQTIDQKVNDLLKKMTIEEKIGQLNQYTGDNQATGPITINP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECC NKQSEIKAGLIGSMLNIIGTKYTRQYQELAMQSRLKIPLLFGQDVIHGYKTTFPLPLAEA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCCCCHHH ASWDLQAIELAARVAATEASASGIHWTFAPMVDISRDPRWGRVMEGAGEDTYLGSKIAYA CCCCHHHHHHHHHHHHCCCCCCCCEEEEECEEECCCCCCCCHHHCCCCCCCCCCCCEEEE RVKGFQGNKLGDLNSVMACVKHFAAYGAGVGGRDYNSVDMSERMLWETYLPPFKAALDAG EECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH AATFMNSFNDINGIPATGNAHLQRDILKGKWNFQGFVVSDWGSIGEMVAHGYSKNLKEAA HHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH YSAITAGSDMDMESNAYRYNLAQLVKEGRVSVDLIDDAVKRILRKKFELGLFDDPYRYSD HHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCC EKRAEKALNNPEHRKAALDVAQKSIVLLKNENQTLPISKSVKTIAFIGPMVKEYKENMGF HHHHHHHHCCCHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCE WSVELPEVDYNKWIVSQWDGLQNKVGKNTKLLYAKGCEIEGTNKDGFAEAVETAKQADVV EEEECCCCCCCCHHHHHCCCHHHHCCCCCEEEEEECCEECCCCCCHHHHHHHHHHHCCEE ILSIGERRDMSGEAKSRSDIHLPGVQEDLVKAIQATGKPVVVLINAGRPLVFNWTADNVP EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCC AVVYTWWLGTEAGNAIANVLFGDYNPSGKLPMTFPREVGQIPIYYNHFSTGRPAKTENET EEEEEEEECCCCCCHHHHHEECCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCC NYVSAYIDLKNSPKFPFGYGLSYTQFSYSDLKLSSTKIKSNETIKVSFKLSNVGKVAGEE CEEEEEEEECCCCCCCCCCCCCCCEECCCCEEEECEEECCCCEEEEEEEECCCCHHHHHH VAQLYLKDKFGSVVRPVLELRDFEKVKLNAGESKTIEFTIDKEKLSFYNDKLEWTTEPGD HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEHHHHHHHCCCEEEECCCCC FELMIGSSSADIKLRSDFELLEK EEEEEECCCCCEEECCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]