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The map label for this gene is dedA [C]

Identifier: 146299213

GI number: 146299213

Start: 1665243

End: 1665923

Strand: Direct

Name: dedA [C]

Synonym: Fjoh_1453

Alternate gene names: 146299213

Gene position: 1665243-1665923 (Clockwise)

Preceding gene: 146299212

Following gene: 146299220

Centisome position: 27.31

GC content: 30.84

Gene sequence:

>681_bases
ATGACTAAGTTTGATTGGACCCAGTTAATAAACCCTGAATTTTACATAACTTTAAGTATCGGAGGTTTTGAAATTGGGCT
GTTTATTGTTCTGTTTATTGTTTTTGCAGAAACAGGACTTTTTGCAGGTTTTTTTCTACCAGGAGATAGTTTGCTTTTCT
TAGCTGGTATTTACAGCCGCGATTTAATTCAAAATGTAGTTTATATCCCAGGTGATTTTATAAATGTGTTTTTGCTTTCG
ACTGCTGTTGCTATTATGGGAGTTTTAGGAAATATGACAGGCTACTGGTTTGGAGCAAAAAGCGGTTATTATTTATTTAA
AAAAGAAGATACATTCTGGTTTAAGAAAAAATATCTTTTACAGTCAAAAGATTTCTTTGAAAAATATGGCGGAAAAGCAA
TTATATACGCGCGTTTCCTTCCAATCTTTAGAACTTTCGCTCCAATTATTGCAGGGATTGTTTCAATGGACAAAAAGAAA
TTTATGTTTTTCAATATCCTGAGTTCTTTCTTGTGGTCATTTATCTTAATTTTTGCCGGACATTATTTATACGGAGTGTT
CTTAAAACAAGGAATTGATCTAAAACACCACATAGAATATATCATTATTATAATTGTTATTATATCAACTTTCCCGGTTC
TTCTAAAACTTTTAAAGAAGAAACCAGTTGAAAAAATATAA

Upstream 100 bases:

>100_bases
CTTTTTTAATAGTTAATTTATCTTTAAAATATGGCTTTTAATTGTGGTTAAAGCAAATTATTGTTAATTTCACGAACTTA
TAAATAAACCAAATACATTT

Downstream 100 bases:

>100_bases
TTTACTATACAAGGCTAAAAAGTCCGAAGTTCTAAACTTCGGACTTTTTTTATGTCTATTGTTGTCTTTTGAATTTTGAT
TTAATAGATGTCTCGACGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTKFDWTQLINPEFYITLSIGGFEIGLFIVLFIVFAETGLFAGFFLPGDSLLFLAGIYSRDLIQNVVYIPGDFINVFLLS
TAVAIMGVLGNMTGYWFGAKSGYYLFKKEDTFWFKKKYLLQSKDFFEKYGGKAIIYARFLPIFRTFAPIIAGIVSMDKKK
FMFFNILSSFLWSFILIFAGHYLYGVFLKQGIDLKHHIEYIIIIIVIISTFPVLLKLLKKKPVEKI

Sequences:

>Translated_226_residues
MTKFDWTQLINPEFYITLSIGGFEIGLFIVLFIVFAETGLFAGFFLPGDSLLFLAGIYSRDLIQNVVYIPGDFINVFLLS
TAVAIMGVLGNMTGYWFGAKSGYYLFKKEDTFWFKKKYLLQSKDFFEKYGGKAIIYARFLPIFRTFAPIIAGIVSMDKKK
FMFFNILSSFLWSFILIFAGHYLYGVFLKQGIDLKHHIEYIIIIIVIISTFPVLLKLLKKKPVEKI
>Mature_225_residues
TKFDWTQLINPEFYITLSIGGFEIGLFIVLFIVFAETGLFAGFFLPGDSLLFLAGIYSRDLIQNVVYIPGDFINVFLLST
AVAIMGVLGNMTGYWFGAKSGYYLFKKEDTFWFKKKYLLQSKDFFEKYGGKAIIYARFLPIFRTFAPIIAGIVSMDKKKF
MFFNILSSFLWSFILIFAGHYLYGVFLKQGIDLKHHIEYIIIIIVIISTFPVLLKLLKKKPVEKI

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=192, Percent_Identity=32.2916666666667, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1789384, Length=171, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1789481, Length=188, Percent_Identity=31.3829787234043, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 26050; Mature: 25918

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKFDWTQLINPEFYITLSIGGFEIGLFIVLFIVFAETGLFAGFFLPGDSLLFLAGIYSR
CCCCCHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHH
DLIQNVVYIPGDFINVFLLSTAVAIMGVLGNMTGYWFGAKSGYYLFKKEDTFWFKKKYLL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCHHHHHHHHH
QSKDFFEKYGGKAIIYARFLPIFRTFAPIIAGIVSMDKKKFMFFNILSSFLWSFILIFAG
HHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
HYLYGVFLKQGIDLKHHIEYIIIIIVIISTFPVLLKLLKKKPVEKI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TKFDWTQLINPEFYITLSIGGFEIGLFIVLFIVFAETGLFAGFFLPGDSLLFLAGIYSR
CCCCHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHH
DLIQNVVYIPGDFINVFLLSTAVAIMGVLGNMTGYWFGAKSGYYLFKKEDTFWFKKKYLL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCHHHHHHHHH
QSKDFFEKYGGKAIIYARFLPIFRTFAPIIAGIVSMDKKKFMFFNILSSFLWSFILIFAG
HHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
HYLYGVFLKQGIDLKHHIEYIIIIIVIISTFPVLLKLLKKKPVEKI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]