| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is macB [H]
Identifier: 146299220
GI number: 146299220
Start: 1673609
End: 1674856
Strand: Direct
Name: macB [H]
Synonym: Fjoh_1460
Alternate gene names: 146299220
Gene position: 1673609-1674856 (Clockwise)
Preceding gene: 146299213
Following gene: 146299225
Centisome position: 27.45
GC content: 33.97
Gene sequence:
>1248_bases ATGCTTCTTTATCTAAGATTATTAAAAGAAAGTCTAAGCTTTGCCATAAACGCTTTACGAAATAATAAACTTCGTACTTT GTTGTCGTTATTGGGTGTTACAATTGGTATTTTTTCAATAATTGCCGTCTTGGCTGCAGTTGATTCTTTAGACAAAAAAA TCTCTAAAGATTTGAGCAGTTTAGATAAAAATACGATTTATTTAATGAAATTCAGTTTTGGGCCTTCAGAAATTCCACAA TGGAAGAGAGAACAGTTTCCAAATGTGAAATATGATGAATATGTTAACTTAAAAAATTCTCTTAATAATACAGATCAGGT TGGGTATCAGCTTTGGGTTAATAAAGAAACTTTAAAATATGATTCTAAAACTGTAGCCGATGTAAGGATTAATCCATCTT CATTTGAAATGGGGGATATTGATGGTTTAAGTTTTGAAAAAGGACGATTTTATAATGAATCTGAATCGAACTCAGGAACT GCTGTAATTGTTTTGGGATACGAAATTGCTCAGGGACTTTTTGGGGATATTGATCCAATTGGTAAAAATATCCGATTGTA TGGCCAGCGTTTTACTGTAATTGGTGTAATTGCCAAACAAGGTGCGGGTTTTTTTGGAGACAGTAATGATACATCAGTTT ATCTGCCGGCTAATTTTTTACGCCGAATGTATGGCGACAGCGATGCAATGACTCCAATGATTATTTTAAAACCTACTAAA GGTGTTGATATGGAAGCTTATAAAGCTGAAGTTTCCCAAAAATTAAGAGCAATTCGCGGAATGAAAGCAGGAGAAATGGA TAACTTTTTCATAAATGTGCTTTCTGGTTTTACTGATTTTATCGACGGAATTTTAGGCCAGATGAATGTAGTAGGGTGGA TTATCAGCGGATTTTCTCTTTTGGTCGGCGGTTTCGGAATTGCCAATATTATGTTTGTATCGGTTAAAGAAAGAACCAAT TTAATTGGTATTCAAAAATCATTGGGAGCCAAAAACAGATTTATATTATTTCAGTTTTTATTTGAAGCTATAATTCTCTC TGTAATTGGCGGAATTATTGGTTTATTGATGGTTTGGGGAATTGCAGTTATTTTAACCAAAGCACTGGATTTTGAATTTG TATTGAGCTTTGGAAATATAATTTTGGGAACAACTTTAGCGGCGCTTATTGGATTGATTTCGGGTATTCTGCCGGCTATT TCTGCAGCAAATCTTGATCCTGTAGAAGCAATTAGAACAGGGATGTAG
Upstream 100 bases:
>100_bases GTAACAATCTCGTAAAAAAATCTACTGATGAGTAAGTTAACTTTTATTAGGTTTTTGTTTTTAAATTATTGAATTTTACT TTATTGAAAAATACTACTAT
Downstream 100 bases:
>100_bases TTTTTTTGGAAGATTAAAAGGGGCTTGGATAATAAGGTTCTGAGTTTTTTGTAAATGAAAAATATTTTAAAGTGCCATAA AGTTTTTCCCTGCTTTGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MLLYLRLLKESLSFAINALRNNKLRTLLSLLGVTIGIFSIIAVLAAVDSLDKKISKDLSSLDKNTIYLMKFSFGPSEIPQ WKREQFPNVKYDEYVNLKNSLNNTDQVGYQLWVNKETLKYDSKTVADVRINPSSFEMGDIDGLSFEKGRFYNESESNSGT AVIVLGYEIAQGLFGDIDPIGKNIRLYGQRFTVIGVIAKQGAGFFGDSNDTSVYLPANFLRRMYGDSDAMTPMIILKPTK GVDMEAYKAEVSQKLRAIRGMKAGEMDNFFINVLSGFTDFIDGILGQMNVVGWIISGFSLLVGGFGIANIMFVSVKERTN LIGIQKSLGAKNRFILFQFLFEAIILSVIGGIIGLLMVWGIAVILTKALDFEFVLSFGNIILGTTLAALIGLISGILPAI SAANLDPVEAIRTGM
Sequences:
>Translated_415_residues MLLYLRLLKESLSFAINALRNNKLRTLLSLLGVTIGIFSIIAVLAAVDSLDKKISKDLSSLDKNTIYLMKFSFGPSEIPQ WKREQFPNVKYDEYVNLKNSLNNTDQVGYQLWVNKETLKYDSKTVADVRINPSSFEMGDIDGLSFEKGRFYNESESNSGT AVIVLGYEIAQGLFGDIDPIGKNIRLYGQRFTVIGVIAKQGAGFFGDSNDTSVYLPANFLRRMYGDSDAMTPMIILKPTK GVDMEAYKAEVSQKLRAIRGMKAGEMDNFFINVLSGFTDFIDGILGQMNVVGWIISGFSLLVGGFGIANIMFVSVKERTN LIGIQKSLGAKNRFILFQFLFEAIILSVIGGIIGLLMVWGIAVILTKALDFEFVLSFGNIILGTTLAALIGLISGILPAI SAANLDPVEAIRTGM >Mature_415_residues MLLYLRLLKESLSFAINALRNNKLRTLLSLLGVTIGIFSIIAVLAAVDSLDKKISKDLSSLDKNTIYLMKFSFGPSEIPQ WKREQFPNVKYDEYVNLKNSLNNTDQVGYQLWVNKETLKYDSKTVADVRINPSSFEMGDIDGLSFEKGRFYNESESNSGT AVIVLGYEIAQGLFGDIDPIGKNIRLYGQRFTVIGVIAKQGAGFFGDSNDTSVYLPANFLRRMYGDSDAMTPMIILKPTK GVDMEAYKAEVSQKLRAIRGMKAGEMDNFFINVLSGFTDFIDGILGQMNVVGWIISGFSLLVGGFGIANIMFVSVKERTN LIGIQKSLGAKNRFILFQFLFEAIILSVIGGIIGLLMVWGIAVILTKALDFEFVLSFGNIILGTTLAALIGLISGILPAI SAANLDPVEAIRTGM
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=415, Percent_Identity=31.0843373493976, Blast_Score=144, Evalue=8e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 45614; Mature: 45614
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLYLRLLKESLSFAINALRNNKLRTLLSLLGVTIGIFSIIAVLAAVDSLDKKISKDLSS CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDKNTIYLMKFSFGPSEIPQWKREQFPNVKYDEYVNLKNSLNNTDQVGYQLWVNKETLKY CCCCEEEEEEECCCCCCCCCHHHHHCCCCCHHHHCCHHHHCCCCHHCCEEEEECCHHHHC DSKTVADVRINPSSFEMGDIDGLSFEKGRFYNESESNSGTAVIVLGYEIAQGLFGDIDPI CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHCCCCCCC GKNIRLYGQRFTVIGVIAKQGAGFFGDSNDTSVYLPANFLRRMYGDSDAMTPMIILKPTK CCCEEEECCEEEEEEEEHHCCCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCEEEEECCC GVDMEAYKAEVSQKLRAIRGMKAGEMDNFFINVLSGFTDFIDGILGQMNVVGWIISGFSL CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVGGFGIANIMFVSVKERTNLIGIQKSLGAKNRFILFQFLFEAIILSVIGGIIGLLMVWG HHHCCCHHHEEEEEEHHHCCCEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAVILTKALDFEFVLSFGNIILGTTLAALIGLISGILPAISAANLDPVEAIRTGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC >Mature Secondary Structure MLLYLRLLKESLSFAINALRNNKLRTLLSLLGVTIGIFSIIAVLAAVDSLDKKISKDLSS CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDKNTIYLMKFSFGPSEIPQWKREQFPNVKYDEYVNLKNSLNNTDQVGYQLWVNKETLKY CCCCEEEEEEECCCCCCCCCHHHHHCCCCCHHHHCCHHHHCCCCHHCCEEEEECCHHHHC DSKTVADVRINPSSFEMGDIDGLSFEKGRFYNESESNSGTAVIVLGYEIAQGLFGDIDPI CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHCCCCCCC GKNIRLYGQRFTVIGVIAKQGAGFFGDSNDTSVYLPANFLRRMYGDSDAMTPMIILKPTK CCCEEEECCEEEEEEEEHHCCCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCEEEEECCC GVDMEAYKAEVSQKLRAIRGMKAGEMDNFFINVLSGFTDFIDGILGQMNVVGWIISGFSL CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVGGFGIANIMFVSVKERTNLIGIQKSLGAKNRFILFQFLFEAIILSVIGGIIGLLMVWG HHHCCCHHHEEEEEEHHHCCCEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAVILTKALDFEFVLSFGNIILGTTLAALIGLISGILPAISAANLDPVEAIRTGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA