| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299143
Identifier: 146299143
GI number: 146299143
Start: 1578925
End: 1579533
Strand: Direct
Name: 146299143
Synonym: Fjoh_1383
Alternate gene names: NA
Gene position: 1578925-1579533 (Clockwise)
Preceding gene: 146299142
Following gene: 146299150
Centisome position: 25.9
GC content: 32.84
Gene sequence:
>609_bases ATGAGTATGACCCCAAACCTACAAATTGAACTTAGACGTTTTATTTCTTCTAATGTTGTTTCAAAGCTAAACAAGTTTTA TTTTGAAAATGATGCACTCCTAATAAAGGGAATTGATGTTTCGATAGGTACGGTTTTAATGGGACTCTATAACAAGGCCG AAGAATCTGGTTTTTACAAAGAGATTGTTTCTCAAATCGAAGACAACTCAAGTTTTTATCAGGAAGTCGATTTTACTTCT GGCAGAATTTTATCAGTCGACGATTGTTATCGCACAGAAGGAAATCCAATATTAAAAGAAATCTTTACCAATAAAAAAGG CAGAATTTCTGAAATGATTTCAAACGAAGTCGGCATCAAAAGCGAAACAGCCCGCGAAATACTTAACTTCTCTGCACTCC TTGTAGTCTCTTATCTTAAAAATAACATTCAGTTACTTGATAGTCTAAAACTCCTTTTAGAAGAACAAAAAAGAGACATT TTAAACAGCATTCAACCCGGAATCAAAATTATCCTTGGCTTTTCATGTTACGAATCTGTTGAAGAAAAAAACCAAAACAT CGGAAGATCAATCTTTACACTTTTCGGACATAATTTTTTTAGTTTCTAA
Upstream 100 bases:
>100_bases TTGGATATGTTAAAATATTTTATATTTTTATCCTGATAAACGATAAAAAGCCCCACTTTATCGATTATTTTGAATAAGTA TAAATAATTATTTAAAAGTT
Downstream 100 bases:
>100_bases GAAATAAAAAATCCCATTTTACAAAAGTAAAACAGGATTTATATTCCATTAAATCTTGAGAAGATTTATGCGTTTTTCAA ATTAATAACTTCTTGGTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MSMTPNLQIELRRFISSNVVSKLNKFYFENDALLIKGIDVSIGTVLMGLYNKAEESGFYKEIVSQIEDNSSFYQEVDFTS GRILSVDDCYRTEGNPILKEIFTNKKGRISEMISNEVGIKSETAREILNFSALLVVSYLKNNIQLLDSLKLLLEEQKRDI LNSIQPGIKIILGFSCYESVEEKNQNIGRSIFTLFGHNFFSF
Sequences:
>Translated_202_residues MSMTPNLQIELRRFISSNVVSKLNKFYFENDALLIKGIDVSIGTVLMGLYNKAEESGFYKEIVSQIEDNSSFYQEVDFTS GRILSVDDCYRTEGNPILKEIFTNKKGRISEMISNEVGIKSETAREILNFSALLVVSYLKNNIQLLDSLKLLLEEQKRDI LNSIQPGIKIILGFSCYESVEEKNQNIGRSIFTLFGHNFFSF >Mature_201_residues SMTPNLQIELRRFISSNVVSKLNKFYFENDALLIKGIDVSIGTVLMGLYNKAEESGFYKEIVSQIEDNSSFYQEVDFTSG RILSVDDCYRTEGNPILKEIFTNKKGRISEMISNEVGIKSETAREILNFSALLVVSYLKNNIQLLDSLKLLLEEQKRDIL NSIQPGIKIILGFSCYESVEEKNQNIGRSIFTLFGHNFFSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23054; Mature: 22923
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMTPNLQIELRRFISSNVVSKLNKFYFENDALLIKGIDVSIGTVLMGLYNKAEESGFYK CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHH EIVSQIEDNSSFYQEVDFTSGRILSVDDCYRTEGNPILKEIFTNKKGRISEMISNEVGIK HHHHHHHCCHHHHHHHCCCCCCEEECHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHCCCC SETAREILNFSALLVVSYLKNNIQLLDSLKLLLEEQKRDILNSIQPGIKIILGFSCYESV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH EEKNQNIGRSIFTLFGHNFFSF HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SMTPNLQIELRRFISSNVVSKLNKFYFENDALLIKGIDVSIGTVLMGLYNKAEESGFYK CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHH EIVSQIEDNSSFYQEVDFTSGRILSVDDCYRTEGNPILKEIFTNKKGRISEMISNEVGIK HHHHHHHCCHHHHHHHCCCCCCEEECHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHCCCC SETAREILNFSALLVVSYLKNNIQLLDSLKLLLEEQKRDILNSIQPGIKIILGFSCYESV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH EEKNQNIGRSIFTLFGHNFFSF HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA