Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is yqgC [H]

Identifier: 146299142

GI number: 146299142

Start: 1578184

End: 1578648

Strand: Direct

Name: yqgC [H]

Synonym: Fjoh_1382

Alternate gene names: 146299142

Gene position: 1578184-1578648 (Clockwise)

Preceding gene: 146299139

Following gene: 146299143

Centisome position: 25.89

GC content: 36.77

Gene sequence:

>465_bases
ATGGTAGTAGGTGTTTTTGGCAGTTTTCTGCCTGTCTTGCCGGGACTTTCCAGCTGTTGGGTTGGTTTACTGCTGTTGTA
CTTAACAAAAGCCGTTGATAACAATTACTGGCTTTTAGGGATAACACTTTTGCTTACTATAATAATTACTGTTTTAGATT
ATATCATTCCGGCAAAAGGAACTAAAAAGTTTGGCGGAAGCTCTTATGGTGTTTGGGGAACAAACATTGGGTTAATAATT
GGAATTCTGGCTCCAATTCCGTTTGGGGTAATTATTGGTCCGTTTGTAGGAGCTTTAGTTGGTGAAATGATATATGATTC
AACAAACCATAAACGTGCGTTAAAAGCAGCTACAGGATCTCTTCTTGGTTTCCTTGCATCGAGTTTTATCAACTTTGTGT
TTTGTATAATCTATTTCGGAATTTTCATCCACACAACATGGGAATATCGAAACTTATTATTTTAA

Upstream 100 bases:

>100_bases
GTTTTTTCTTTCTATTTTTATAAGACACACAAATAAATTGCAGATTGCAAAATTACATAAAAATATGGATTCATTATTGT
TGATATTAGGTTTTATATGC

Downstream 100 bases:

>100_bases
TTGTGTAACAAATAATTAGCTTTTTTCTTATTTTTTAATTTTTTTAAGAAAAATTTGAATTTTTTTAGAAATAAGATTTT
CTCTGTTTTGACTGCGCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MVVGVFGSFLPVLPGLSSCWVGLLLLYLTKAVDNNYWLLGITLLLTIIITVLDYIIPAKGTKKFGGSSYGVWGTNIGLII
GILAPIPFGVIIGPFVGALVGEMIYDSTNHKRALKAATGSLLGFLASSFINFVFCIIYFGIFIHTTWEYRNLLF

Sequences:

>Translated_154_residues
MVVGVFGSFLPVLPGLSSCWVGLLLLYLTKAVDNNYWLLGITLLLTIIITVLDYIIPAKGTKKFGGSSYGVWGTNIGLII
GILAPIPFGVIIGPFVGALVGEMIYDSTNHKRALKAATGSLLGFLASSFINFVFCIIYFGIFIHTTWEYRNLLF
>Mature_154_residues
MVVGVFGSFLPVLPGLSSCWVGLLLLYLTKAVDNNYWLLGITLLLTIIITVLDYIIPAKGTKKFGGSSYGVWGTNIGLII
GILAPIPFGVIIGPFVGALVGEMIYDSTNHKRALKAATGSLLGFLASSFINFVFCIIYFGIFIHTTWEYRNLLF

Specific function: Unknown

COG id: COG2839

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007403 [H]

Pfam domain/function: PF04306 DUF456 [H]

EC number: NA

Molecular weight: Translated: 16756; Mature: 16756

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVGVFGSFLPVLPGLSSCWVGLLLLYLTKAVDNNYWLLGITLLLTIIITVLDYIIPAKG
CEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
TKKFGGSSYGVWGTNIGLIIGILAPIPFGVIIGPFVGALVGEMIYDSTNHKRALKAATGS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LLGFLASSFINFVFCIIYFGIFIHTTWEYRNLLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVVGVFGSFLPVLPGLSSCWVGLLLLYLTKAVDNNYWLLGITLLLTIIITVLDYIIPAKG
CEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
TKKFGGSSYGVWGTNIGLIIGILAPIPFGVIIGPFVGALVGEMIYDSTNHKRALKAATGS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LLGFLASSFINFVFCIIYFGIFIHTTWEYRNLLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]